Expression of CTSB in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

CTSB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 159.35

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

189.1

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	1944.9
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	1365.1
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	1094.2
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	977.1
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	820.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	761.6
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	716.0
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	703.4
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	639.6
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	576.4
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	565.8
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	564.2
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	560.7
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	536.6
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	528.3
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	527.3
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	525.5
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	522.0
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	521.4
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	512.4
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	507.3
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	475.9
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	459.9
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	456.7
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	449.8
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	449.8
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	449.6
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	448.0
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	447.8
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	445.5
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	444.0
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	434.5
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	410.8
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	398.5
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	395.6
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	395.3
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	388.7
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	387.7
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	387.4
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	378.2
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	370.8
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	368.4
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	365.5
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	362.4
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	352.0
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	351.8
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	351.4
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	349.6
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	345.9
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	344.4
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	343.4
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	340.6
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	338.8
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	336.0
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	335.8
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	335.4
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	331.7
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	329.7
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	329.5
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	326.8
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	325.0
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	324.8
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	315.6
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	310.6
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	307.0
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	305.0
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	301.7
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	299.2
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	297.0
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	295.2
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	293.9
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	291.7
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	289.6
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	285.8
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	285.7
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	282.6
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	274.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	271.9
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	271.2
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	269.5
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	269.4
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	264.1
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	262.0
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	260.8
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	260.6
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	258.3
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	253.6
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	252.1
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	250.8
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	250.3
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	247.0
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	246.8
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	245.6
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	242.8
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	242.7
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	241.1
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	240.5
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	240.3
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	238.3
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	232.5
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	225.9
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	225.8
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	225.3
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	223.2
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	222.5
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	221.1
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	220.5
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	220.2
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	220.0
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	219.0
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	218.4
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	217.9
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	215.1
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	215.0
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	210.7
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	209.8
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	208.8
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	208.0
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	206.8
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	204.3
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	204.2
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	203.8
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	202.3
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	199.0
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	199.0
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	198.2
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	197.4
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	195.2
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	195.0
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	193.8
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	192.3
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	192.2
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	192.1
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	191.7
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	191.1
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	189.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	188.0
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	185.8
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	185.2
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	185.2
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	184.9
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	183.5
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	183.2
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	181.8
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	181.7
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	180.0
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	179.8
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	175.3
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	175.1
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	174.6
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	174.2
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	170.5
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	170.1
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	169.7
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	168.9
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	168.3
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	168.1
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	164.9
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	163.4
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	162.1
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	161.4
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	159.8
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	158.9
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	155.9
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	155.5
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	154.0
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	153.5
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	153.4
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	153.0
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	152.2
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	152.0
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	151.4
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	151.3
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	150.0
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	149.6
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	148.6
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	147.8
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	145.7
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	142.2
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	142.0
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	140.5
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	139.6
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	139.4
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	139.2
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	137.6
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	136.9
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	135.9
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	135.5
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	133.3
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	133.1
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	131.9
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	131.6
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	127.6
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	127.1
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	126.4
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	123.9
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	123.5
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	123.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	122.3
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	121.8
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	121.1
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	120.4
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	120.3
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	117.7
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	116.3
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	116.1
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	115.9
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	115.3
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	115.1
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	114.6
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	114.4
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	113.8
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	112.3
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	111.8
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	111.7
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	111.7
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	110.0
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	107.6
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	106.7
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	106.5
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	105.8
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	105.8
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	103.9
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	103.2
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	101.5
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	100.2
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	99.8
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	98.3
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	97.9
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	97.1
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	95.7
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	95.5
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	91.4
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	91.1
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	90.9
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	90.5
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	90.2
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	90.2
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	89.7
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	89.7
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	89.1
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	89.1
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	89.0
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	87.7
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	87.7
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	87.3
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	87.0
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	85.0
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	83.7
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	82.4
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	80.9
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	80.8
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	80.0
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	78.5
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	78.2
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	76.9
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	75.7
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	75.5
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	75.1
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	74.2
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	74.1
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	74.1
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	74.0
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	73.7
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	71.6
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	71.5
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	70.7
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	70.1
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	68.9
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	68.2
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	65.3
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	64.4
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	62.7
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	62.6
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	62.5
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	62.0
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	60.7
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	60.6
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	59.0
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	58.6
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	57.6
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	56.6
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	56.0
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	55.4
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	55.4
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	55.1
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	53.9
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	53.6
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	53.5
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	52.6
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	52.6
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	52.2
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	51.2
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	50.5
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	50.1
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	49.7
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	49.2
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	48.0
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	47.8
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	47.6
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	47.2
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	46.6
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	45.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	42.7
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	42.5
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	41.0
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	41.0
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	39.9
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	39.5
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	38.0
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	37.4
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	36.0
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	36.0
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	35.0
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	33.6
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	33.5
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	33.1
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	32.5
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	31.6
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	30.8
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	30.2
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	29.2
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	28.3
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	28.2
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	26.7
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	26.2
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	25.4
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	25.0
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	23.2
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	22.8
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	22.0
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	22.0
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	22.0
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	21.5
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	21.4
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	21.4
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	21.1
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	19.7
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	18.5
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	18.5
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	18.2
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	16.1
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	15.6
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	15.5
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	15.5
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	15.3
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	14.9
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	14.6
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	14.4
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	14.3
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	14.2
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	13.7
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	12.8
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	9.9
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	8.0
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	6.2
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	6.2
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	6.0
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	4.7
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	4.4
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	4.3
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	1.8
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

CTSB is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 475.27

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

569.2

Number of samples

231

Samples

Sample	Description	pTPM
DO23524	71 years, female, NA, stage:2, alive, 1050 days	3644.8
DO23523	52 years, male, NA, stage:3, alive, 1080 days	2761.0
DO45131	53 years, male, NA, stage:4, dead, 360 days	2488.7
DO48747	62 years, male, NA, stage:3, alive, 540 days	2271.1
DO50778	60 years, male, NA, stage:4, alive, 630 days	2060.5
DO23547	74 years, male, NA, stage:1, alive, 1020 days	1935.1
DO48720	62 years, female, NA, stage:2, alive, 570 days	1711.4
DO23535	67 years, male, NA, stage:1, alive, 960 days	1659.1
DO45155	69 years, male, NA, stage:2, alive, 2160 days	1558.9
DO45277	64 years, male, NA, stage:3, alive, 600 days	1484.2
DO45119	74 years, male, NA, stage:3, dead, 510 days	1480.6
DO50829	78 years, male, NA, stage:3, alive, 570 days	1371.4
DO45139	63 years, male, NA, stage:3, alive, 1320 days	1364.6
DO50819	72 years, female, NA, stage:2, alive, 510 days	1351.2
DO45221	75 years, female, NA, stage:4, dead, 390 days	1220.9
DO45307	54 years, female, NA, stage:4, dead, 240 days	1206.6
DO45287	74 years, male, NA, stage:1, alive, 390 days	1180.6
DO45135	77 years, male, NA, stage:1, alive, 1410 days	1093.3
DO23519	65 years, male, NA, stage:3, alive, 630 days	1069.3
DO50787	63 years, male, NA, stage:3, alive, 480 days	1052.0
DO45223	67 years, male, NA, stage:4, alive, 1020 days	1050.1
DO45092	62 years, male, NA, stage:4, dead, 1200 days	1049.1
DO48732	73 years, male, NA, stage:3, alive, 630 days	1044.0
DO45275	65 years, male, NA, stage:3, dead, 10 days	1029.0
DO48723	73 years, male, NA, stage:1, alive, 600 days	1021.2
DO45157	62 years, male, NA, stage:2, alive, 1980 days	997.3
DO45303	62 years, female, NA, stage:3, alive, 990 days	971.3
DO45281	83 years, male, NA, stage:4, alive, 750 days	910.1
DO45145	78 years, male, NA, stage:3, dead, 60 days	894.9
DO23550	69 years, male, NA, stage:1, alive, 990 days	890.7
DO23525	71 years, male, NA, stage:4, alive, 1050 days	890.3
DO23527	72 years, male, NA, stage:1, alive, 1050 days	877.2
DO45127	73 years, male, NA, stage:3, dead, 420 days	871.3
DO50800	74 years, male, NA, stage:2, alive, 510 days	855.6
DO45285	59 years, male, NA, stage:3, alive, 480 days	843.3
DO50803	62 years, female, NA, stage:1, alive, 540 days	840.7
DO45225	69 years, male, NA, stage:1, alive, 1050 days	838.5
DO45211	76 years, male, NA, stage:3, alive, 240 days	834.8
DO48725	66 years, male, NA, stage:1, alive, 780 days	828.6
DO48716	71 years, male, NA, stage:2, alive, 720 days	821.9
DO45115	81 years, male, NA, stage:2, alive, 840 days	793.0
DO45201	49 years, male, NA, stage:1, alive, 900 days	791.2
DO45231	84 years, male, NA, stage:2, alive, 930 days	785.0
DO23509	60 years, male, NA, stage:3, dead, 780 days	779.0
DO45187	32 years, female, NA, stage:1, alive, 1260 days	777.6
DO23549	74 years, male, NA, stage:3, alive, 990 days	767.5
DO45197	51 years, male, NA, stage:2, alive, 1170 days	755.6
DO23530	53 years, male, NA, stage:4, dead, 180 days	744.1
DO23521	63 years, male, NA, stage:3, alive, 1110 days	718.5
DO50822	66 years, male, NA, stage:2, alive, 510 days	714.0
DO45261	74 years, male, NA, stage:3, alive, 990 days	713.4
DO50813	56 years, male, NA, stage:2, alive, 420 days	711.4
DO48730	73 years, female, NA, stage:2, alive, 630 days	711.4
DO23515	71 years, male, NA, stage:2, alive, 1230 days	703.6
DO45141	73 years, male, NA, stage:2, alive, 1320 days	703.0
DO50789	73 years, female, NA, stage:2, alive, 570 days	702.6
DO48719	80 years, male, NA, stage:2, alive, 690 days	698.6
DO45249	57 years, male, NA, stage:1, alive, 630 days	677.3
DO23536	56 years, male, NA, stage:2, alive, 930 days	675.4
DO23545	67 years, male, NA, stage:2, dead, 570 days	664.0
DO48728	74 years, female, NA, stage:2, alive, 150 days	653.0
DO50807	67 years, male, NA, stage:1, alive, 540 days	652.1
DO48760	70 years, female, NA, stage:2, alive, 690 days	651.7
DO48693	71 years, male, NA, stage:2, alive, 900 days	648.6
DO45207	68 years, male, NA, stage:1, alive, 1050 days	636.9
DO45255	81 years, male, NA, stage:3, alive, 720 days	629.0
DO45117	73 years, female, NA, stage:2, dead, 1110 days	626.2
DO23531	78 years, female, NA, stage:3, alive, 900 days	625.3
DO23548	78 years, female, NA, stage:1, alive, 840 days	614.1
DO45113	58 years, male, NA, stage:3, alive, 1560 days	607.9
DO23542	66 years, male, NA, stage:3, alive, 960 days	604.2
DO50774	68 years, female, NA, stage:2, alive, 720 days	599.1
DO50859	77 years, male, NA, stage:2, alive, 180 days	595.5
DO45177	81 years, female, NA, stage:3, alive, 1260 days	593.5
DO45193	68 years, female, NA, stage:4, dead, 120 days	592.1
DO45153	77 years, female, NA, stage:2, alive, 1380 days	591.9
DO45181	84 years, female, NA, stage:2, alive, 1200 days	588.9
DO23543	63 years, male, NA, stage:2, alive, 1020 days	576.8
DO45111	74 years, male, NA, stage:2, alive, 1590 days	576.2
DO45167	67 years, male, NA, stage:2, dead, 1440 days	570.0
DO45301	56 years, male, NA, stage:2, dead, 1440 days	562.9
DO45235	68 years, female, NA, stage:1, alive, 900 days	556.9
DO45096	69 years, male, NA, stage:2, dead, 1290 days	544.9
DO45305	66 years, male, NA, stage:4, alive, 300 days	543.1
DO45229	74 years, male, NA, stage:1, alive, 990 days	541.6
DO48751	68 years, male, NA, stage:2, dead, 480 days	527.0
DO23551	73 years, male, NA, stage:3, dead, 150 days	521.7
DO23511	83 years, female, NA, stage:3, dead, 180 days	516.3
DO48721	58 years, female, NA, stage:1, alive, 900 days	513.9
DO45137	38 years, male, NA, stage:1, alive, 1320 days	513.0
DO50850	74 years, male, NA, stage:3, alive, 720 days	511.5
DO45195	62 years, male, NA, stage:1, alive, 390 days	510.0
DO45107	63 years, female, NA, stage:2, alive, 1710 days	505.1
DO48733	72 years, male, NA, stage:2, alive, 600 days	503.4
DO50783	62 years, male, NA, stage:3, alive, 480 days	499.1
DO23518	67 years, male, NA, stage:2, alive, 1320 days	498.5
DO50805	72 years, male, NA, stage:2, alive, 690 days	489.5
DO23544	67 years, male, NA, stage:2, alive, 960 days	484.1
DO48727	81 years, female, NA, stage:2, dead, 390 days	482.2
DO45217	69 years, female, NA, stage:3, dead, 270 days	482.2
DO45297	61 years, female, NA, stage:4, dead, 1260 days	478.2
DO45267	73 years, male, NA, stage:3, dead, 570 days	477.1
DO23514	64 years, male, NA, stage:2, alive, 1290 days	475.4
DO48697	64 years, female, NA, stage:2, dead, 810 days	475.3
DO48704	68 years, female, NA, stage:3, alive, 750 days	472.6
DO48674	80 years, male, NA, stage:2, alive, 1260 days	469.1
DO48742	76 years, male, NA, stage:2, alive, 600 days	464.8
DO45159	65 years, male, NA, stage:3, alive, 1470 days	464.8
DO23510	80 years, female, NA, stage:2, alive, 870 days	460.9
DO48743	69 years, female, NA, stage:2, alive, 570 days	457.7
DO23534	60 years, male, NA, stage:2, alive, 840 days	457.1
DO50808	68 years, male, NA, stage:2, alive, 570 days	455.0
DO45237	58 years, male, NA, stage:2, alive, 900 days	453.0
DO45103	47 years, male, NA, stage:3, alive, 450 days	448.0
DO23538	67 years, male, NA, stage:2, alive, 450 days	445.7
DO45259	65 years, male, NA, stage:3, alive, 330 days	445.3
DO45215	65 years, male, NA, stage:2, alive, 1170 days	445.0
DO48761	55 years, male, NA, stage:2, alive, 870 days	443.8
DO45091	56 years, male, NA, stage:2, dead, 1320 days	442.0
DO45273	62 years, male, NA, stage:2, alive, 480 days	438.6
DO45279	67 years, male, NA, stage:3, alive, 1290 days	422.4
DO45283	60 years, male, NA, stage:3, alive, 510 days	421.9
DO50832	73 years, male, NA, stage:3, alive, 90 days	419.8
DO50806	70 years, male, NA, stage:4, alive, 540 days	419.7
DO48672	81 years, male, NA, stage:2, alive, 450 days	418.5
DO45143	69 years, male, NA, stage:3, alive, 1290 days	416.1
DO50839	47 years, female, NA, stage:3, alive, 330 days	414.2
DO50820	77 years, female, NA, stage:3, alive, 510 days	412.9
DO45179	78 years, female, NA, stage:2, alive, 600 days	411.0
DO48679	72 years, male, NA, stage:2, alive, 1200 days	410.1
DO50809	56 years, male, NA, stage:3, dead, 720 days	409.2
DO23513	76 years, male, NA, stage:3, alive, 1200 days	408.8
DO48737	52 years, male, NA, stage:1, alive, 720 days	408.7
DO45263	67 years, male, NA, stage:3, dead, 270 days	407.5
DO23512	60 years, male, NA, stage:1, alive, 1260 days	405.3
DO45165	75 years, male, NA, stage:2, alive, 690 days	397.5
DO48700	78 years, female, NA, stage:2, alive, 810 days	397.5
DO23532	71 years, female, NA, stage:1, alive, 960 days	394.8
DO23539	77 years, male, NA, stage:1, alive, 1110 days	392.8
DO45269	59 years, male, NA, stage:3, alive, 750 days	392.4
DO48681	57 years, male, NA, stage:2, alive, 900 days	391.2
DO48759	73 years, male, NA, stage:3, alive, 720 days	391.0
DO50818	65 years, male, NA, stage:2, alive, 510 days	389.1
DO45239	42 years, male, NA, stage:2, alive, 870 days	389.0
DO45227	57 years, female, NA, stage:2, alive, 1020 days	379.7
DO23508	79 years, female, NA, stage:2, alive, 390 days	376.3
DO45129	61 years, male, NA, stage:3, alive, 1470 days	375.8
DO50776	75 years, male, NA, stage:1, alive, 690 days	374.7
DO45093	71 years, male, NA, stage:2, dead, 720 days	373.3
DO45233	83 years, male, NA, stage:3, alive, 900 days	372.7
DO50857	72 years, male, NA, stage:2, alive, 210 days	369.1
DO45149	70 years, female, NA, stage:2, alive, 1260 days	366.4
DO45219	78 years, male, NA, stage:2, alive, 1080 days	361.2
DO50802	49 years, male, NA, stage:2, alive, 930 days	355.1
DO45257	46 years, male, NA, stage:3, alive, 810 days	355.0
DO23541	65 years, male, NA, stage:2, alive, 930 days	354.6
DO45299	70 years, female, NA, stage:1, alive, 1440 days	352.3
DO45205	67 years, female, NA, stage:2, dead, 90 days	351.1
DO50793	76 years, male, NA, stage:4, alive, 540 days	349.4
DO45094	76 years, male, NA, stage:3, alive, 1650 days	349.4
DO227801	77 years, female, NA, stage:1, alive, 660 days	348.5
DO45245	75 years, female, NA, stage:2, dead, 240 days	346.0
DO45199	86 years, female, NA, stage:2, alive, 1350 days	343.9
DO45173	63 years, male, NA, stage:3, alive, 1170 days	340.6
DO23537	79 years, male, NA, stage:2, dead, 900 days	340.6
DO45185	89 years, male, NA, stage:2, alive, 600 days	338.9
DO50785	37 years, male, NA, stage:4, dead, 90 days	335.7
DO45265	73 years, male, NA, stage:3, alive, 1020 days	331.5
DO48712	50 years, male, NA, stage:2, alive, 810 days	329.6
DO45209	70 years, male, NA, stage:4, alive, 1350 days	328.4
DO23526	66 years, male, NA, stage:3, alive, 1050 days	322.9
DO50799	66 years, female, NA, stage:2, alive, 540 days	317.1
DO23552	80 years, female, NA, stage:1, alive, 810 days	314.7
DO50798	77 years, male, NA, stage:3, dead, 30 days	314.2
DO50817	75 years, male, NA, stage:2, alive, 390 days	313.2
DO23546	63 years, male, NA, stage:2, alive, 1050 days	306.1
DO45161	74 years, male, NA, stage:2, dead, 540 days	298.8
DO45095	66 years, male, NA, stage:2, alive, 1620 days	298.6
DO45121	61 years, male, NA, stage:3, alive, 1530 days	298.4
DO23540	73 years, male, NA, stage:1, alive, 750 days	298.3
DO23517	62 years, male, NA, stage:2, alive, 1200 days	294.9
DO50815	62 years, male, NA, stage:3, alive, 150 days	292.7
DO227643	79 years, male, NA, stage:2, alive, 1260 days	289.2
DO45183	72 years, female, NA, stage:2, dead, 570 days	286.0
DO48746	76 years, male, NA, stage:3, alive, 570 days	284.0
DO48741	64 years, male, NA, stage:3, alive, 240 days	276.9
DO45109	63 years, male, NA, stage:2, alive, 1590 days	275.6
DO48757	68 years, female, NA, stage:3, alive, 480 days	271.3
DO45251	57 years, female, NA, stage:2, alive, 900 days	271.2
DO50804	81 years, male, NA, stage:2, alive, 720 days	266.7
DO50825	70 years, male, NA, stage:2, alive, 390 days	266.7
DO48677	58 years, male, NA, stage:3, alive, 1140 days	253.8
DO48715	58 years, female, NA, stage:2, dead, 690 days	250.1
DO45105	61 years, male, NA, stage:1, alive, 1680 days	246.4
DO45247	31 years, female, NA, stage:2, alive, 210 days	245.3
DO45169	74 years, male, NA, stage:3, alive, 1350 days	245.2
DO50844	75 years, male, NA, stage:4, alive, 300 days	242.2
DO45171	56 years, male, NA, stage:3, alive, 600 days	239.4
DO45253	50 years, male, NA, stage:2, alive, 870 days	237.8
DO45213	58 years, male, NA, stage:1, alive, 1200 days	234.9
DO45101	63 years, male, NA, stage:2, alive, 1680 days	228.9
DO45099	46 years, male, NA, stage:3, alive, 1590 days	228.8
DO23528	45 years, female, NA, stage:2, alive, 1020 days	224.8
DO45289	78 years, female, NA, stage:3, alive, 360 days	222.3
DO23516	69 years, male, NA, stage:3, dead, 20 days	217.8
DO50840	49 years, male, NA, stage:2, alive, 330 days	212.3
DO23533	61 years, male, NA, stage:2, alive, 900 days	209.7
DO45123	78 years, female, NA, stage:2, dead, 570 days	207.3
DO45203	71 years, female, NA, stage:2, alive, 1170 days	206.7
DO50814	83 years, male, NA, stage:3, alive, 420 days	197.7
DO48736	76 years, female, NA, stage:1, alive, 600 days	197.5
DO48695	77 years, male, NA, stage:2, alive, 720 days	195.4
DO45243	74 years, female, NA, stage:3, alive, 930 days	194.3
DO45191	61 years, female, NA, stage:2, alive, 1200 days	188.6
DO45189	85 years, female, NA, stage:2, alive, 1200 days	187.0
DO50791	79 years, female, NA, stage:1, dead, 480 days	179.4
DO45241	49 years, male, NA, stage:1, alive, 1080 days	178.2
DO50855	47 years, male, NA, stage:2, alive, 570 days	176.1
DO45133	64 years, male, NA, stage:3, dead, 660 days	173.1
DO48701	78 years, male, NA, stage:2, alive, 780 days	170.9
DO45163	76 years, male, NA, stage:2, alive, 960 days	170.6
DO23529	72 years, male, NA, stage:4, alive, 930 days	169.2
DO45175	74 years, male, NA, stage:2, alive, 1140 days	157.6
DO48682	72 years, female, NA, stage:3, dead, 120 days	156.5
DO50845	72 years, male, NA, stage:3, alive, 210 days	156.1
DO48717	54 years, male, NA, stage:4, dead, 180 days	155.4
DO45097	69 years, male, NA, stage:3, alive, 1620 days	150.1
DO50811	62 years, male, NA, stage:1, alive, 450 days	148.5
DO48706	72 years, male, NA, stage:2, alive, 870 days	116.5
DO50816	63 years, male, NA, stage:2, alive, 390 days	107.7
DO45125	58 years, male, NA, stage:3, alive, 1680 days	105.6
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
851	Tumor	1.6
745	Tumor	1.4
1027	Tumor	1.2
257	Tumor	1.1
937	Tumor	1.0
363	Tumor	1.0
451	Tumor	1.0
125	Tumor	0.9
147	Tumor	0.8
957	Tumor	0.7
1043	Tumor	0.7
744	Normal	0.7
755	Tumor	0.7
617	Tumor	0.7
538	Normal	0.7
635	Tumor	0.6
715	Tumor	0.6
878	Normal	0.6
554	Normal	0.5
746	Normal	0.5
953	Tumor	0.5
124	Normal	0.5
955	Tumor	0.5
636	Normal	0.5
313	Tumor	0.4
817	Tumor	0.4
435	Tumor	0.4
685	Tumor	0.4
966	Normal	0.4
421	Tumor	0.4
452	Normal	0.4
911	Tumor	0.4
661	Tumor	0.3
568	Normal	0.3
394	Normal	0.3
984	Normal	0.3
1028	Normal	0.3
114	Normal	0.3
952	Normal	0.3
713	Tumor	0.3
342	Normal	0.3
686	Normal	0.3
474	Normal	0.3
492	Normal	0.3
951	Tumor	0.3
723	Tumor	0.3
778	Normal	0.3
128	Normal	0.3
356	Normal	0.3
414	Normal	0.3
567	Tumor	0.3
518	Normal	0.3
432	Normal	0.3
912	Normal	0.3
112	Tumor	0.3
916	Normal	0.3
738	Normal	0.3
278	Normal	0.3
864	Normal	0.2
434	Normal	0.2
395	Tumor	0.2
314	Normal	0.2
526	Normal	0.2
477	Tumor	0.2
466	Normal	0.2
564	Normal	0.2
436	Normal	0.2
343	Tumor	0.2
1016	Normal	0.2
913	Tumor	0.2
742	Normal	0.2
975	Tumor	0.2
722	Normal	0.2
824	Normal	0.2
924	Normal	0.2
482	Normal	0.2
214	Normal	0.2
388	Normal	0.2
468	Normal	0.2
862	Normal	0.2
558	Normal	0.2
462	Normal	0.2
493	Tumor	0.2
344	Normal	0.2
572	Normal	0.2
494	Normal	0.2
728	Normal	0.1
546	Normal	0.1
142	Normal	0.1
311	Tumor	0.1
332	Normal	0.1
286	Normal	0.1
874	Normal	0.1
353	Tumor	0.1
915	Tumor	0.1
1014	Normal	0.1
392	Normal	0.1
352	Normal	0.1
956	Normal	0.1
618	Normal	0.1
816	Normal	0.1
362	Normal	0.1
716	Normal	0.1
982	Normal	0.1
1044	Normal	0.1
976	Normal	0.1
537	Tumor	0.1
513	Tumor	0.1
954	Normal	0.1
944	Normal	0.1
186	Normal	0.1
222	Normal	0.1
446	Normal	0.1
424	Normal	0.1
464	Normal	0.1
786	Normal	0.1
1026	Normal	0.1
922	Normal	0.1
557	Tumor	0.1
981	Tumor	0.1
698	Normal	0.1
448	Normal	0.1
148	Normal	0.1
427	Tumor	0.1
212	Normal	0.1
918	Normal	0.1
866	Normal	0.1
1041	Tumor	0.1
484	Normal	0.0
852	Normal	0.0
412	Normal	0.0
136	Normal	0.0
364	Normal	0.0
191	Tumor	0.0
721	Tumor	0.0
132	Normal	0.0
642	Normal	0.0
858	Normal	0.0
756	Normal	0.0
861	Tumor	0.0
223	Tumor	0.0
868	Normal	0.0
914	Normal	0.0
664	Normal	0.0
925	Tumor	0.0
491	Tumor	0.0
162	Normal	0.0
938	Normal	0.0
697	Tumor	0.0
172	Normal	0.0
312	Normal	0.0
268	Normal	0.0
376	Normal	0.0
525	Tumor	0.0
354	Normal	0.0
368	Normal	0.0
196	Normal	0.0
648	Normal	0.0
227	Tumor	0.0
882	Normal	0.0
1022	Normal	0.0
714	Normal	0.0
488	Normal	0.0
696	Normal	0.0
391	Tumor	0.0
823	Tumor	0.0
514	Normal	0.0
524	Normal	0.0
428	Normal	0.0
358	Normal	0.0
224	Normal	0.0
528	Normal	0.0
328	Normal	0.0
574	Normal	0.0
498	Normal	0.0
534	Normal	0.0
1042	Normal	0.0
135	Tumor	0.0
553	Tumor	0.0
978	Normal	0.0
298	Normal	0.0
341	Tumor	0.0
815	Tumor	-0.1
662	Normal	-0.1
366	Normal	-0.1
1032	Normal	-0.1
422	Normal	-0.1
818	Normal	-0.1
423	Tumor	-0.1
672	Normal	-0.1
228	Normal	-0.1
138	Normal	-0.1
232	Normal	-0.1
1015	Tumor	-0.1
516	Normal	-0.1
272	Normal	-0.1
146	Normal	-0.1
616	Normal	-0.1
195	Tumor	-0.1
396	Normal	-0.1
126	Normal	-0.1
131	Tumor	-0.1
535	Tumor	-0.1
386	Normal	-0.1
628	Normal	-0.1
724	Normal	-0.1
983	Tumor	-0.1
968	Normal	-0.1
536	Normal	-0.1
917	Tumor	-0.1
218	Normal	-0.1
444	Normal	-0.1
188	Normal	-0.1
463	Tumor	-0.2
284	Normal	-0.2
217	Tumor	-0.2
258	Normal	-0.2
884	Normal	-0.2
563	Tumor	-0.2
384	Normal	-0.2
964	Normal	-0.2
921	Tumor	-0.2
467	Tumor	-0.2
873	Tumor	-0.2
533	Tumor	-0.2
262	Normal	-0.2
478	Normal	-0.2
958	Normal	-0.2
926	Normal	-0.2
465	Tumor	-0.2
445	Tumor	-0.2
433	Tumor	-0.2
426	Normal	-0.2
472	Normal	-0.2
113	Tumor	-0.2
221	Tumor	-0.2
666	Normal	-0.2
387	Tumor	-0.2
1045	Tumor	-0.3
447	Tumor	-0.3
145	Tumor	-0.3
385	Tumor	-0.3
416	Normal	-0.3
943	Tumor	-0.3
327	Tumor	-0.3
883	Tumor	-0.3
517	Tumor	-0.3
857	Tumor	-0.3
111	Normal	-0.3
571	Tumor	-0.3
127	Tumor	-0.3
1031	Tumor	-0.3
1046	Normal	-0.3
415	Tumor	-0.3
977	Tumor	-0.3
283	Tumor	-0.3
515	Tumor	-0.3
615	Tumor	-0.3
573	Tumor	-0.3
231	Tumor	-0.3
141	Tumor	-0.3
187	Tumor	-0.4
867	Tumor	-0.4
663	Tumor	-0.4
665	Tumor	-0.4
185	Tumor	-0.4
813	Tumor	-0.4
877	Tumor	-0.4
963	Tumor	-0.4
1021	Tumor	-0.4
213	Tumor	-0.4
785	Tumor	-0.5
461	Tumor	-0.5
211	Tumor	-0.5
192	Normal	-0.5
1013	Tumor	-0.5
355	Tumor	-0.5
727	Tumor	-0.5
965	Tumor	-0.5
497	Tumor	-0.5
331	Tumor	-0.5
425	Tumor	-0.5
123	Tumor	-0.5
367	Tumor	-0.5
483	Tumor	-0.5
814	Normal	-0.6
923	Tumor	-0.6
743	Tumor	-0.6
473	Tumor	-0.6
393	Tumor	-0.6
161	Tumor	-0.6
137	Tumor	-0.6
456	Normal	-0.6
741	Tumor	-0.6
641	Tumor	-0.6
1025	Tumor	-0.6
967	Tumor	-0.6
865	Tumor	-0.6
737	Tumor	-0.6
365	Tumor	-0.7
443	Tumor	-0.7
545	Tumor	-0.7
627	Tumor	-0.7
527	Tumor	-0.7
277	Tumor	-0.7
671	Tumor	-0.7
881	Tumor	-0.7
375	Tumor	-0.7
267	Tumor	-0.7
523	Tumor	-0.7
383	Tumor	-0.7
431	Tumor	-0.8
777	Tumor	-0.8
481	Tumor	-0.8
261	Tumor	-0.8
647	Tumor	-0.8
413	Tumor	-0.8
411	Tumor	-0.8
285	Tumor	-0.8
297	Tumor	-0.9
171	Tumor	-0.9
361	Tumor	-0.9
351	Tumor	-0.9
863	Tumor	-1.0
357	Tumor	-1.0
471	Tumor	-1.0
487	Tumor	-1.1
271	Tumor	-1.1
455	Tumor	-1.2
695	Tumor	-1.2
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA018156	Antibody HPA048998	Antibody CAB000457
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS
Adenocarcinoma, NOS Cholangiocarcinoma