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SLC4A2
HPA
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  • SLC4A2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC4A2
Synonyms AE2, BND3L, EPB3L1, HKB3, NBND3
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 4 member 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q36.1
Chromosome location (bp) 151057210 - 151076526
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000164889 (version 109)
Entrez gene 6522
HGNC HGNC:11028
UniProt P04920 (UniProt - Evidence at protein level)
neXtProt NX_P04920
GeneCards SLC4A2
Antibodypedia SLC4A2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Sodium-independent anion exchanger which mediates the electroneutral exchange of chloride for bicarbonate ions across the cell membrane 1, 2. Plays an important role in osteoclast differentiation and function 3. Regulates bone resorption and calpain-dependent actin cytoskeleton organization in osteoclasts via anion exchange-dependent control of pH (By similarity). Essential for intracellular pH regulation in CD8(+) T-cells upon CD3 stimulation, modulating CD8(+) T-cell responses (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Anion exchange, Antiport, Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the anion exchanger family of membrane transport proteins. The encoded protein regulates intracellular pH, biliary bicarbonate secretion, and chloride uptake. Reduced expression of this gene may be associated with primary biliary cirrhosis (PBC) in human patients, while differential expression of this gene may be associated with malignant hepatocellular carcinoma, colon and gastric cancers. [provided by RefSeq, Nov 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC4A2-201
ENSP00000376571
ENST00000392826
P04920
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006811 [ion transport]
GO:0006820 [anion transport]
GO:0008509 [anion transmembrane transporter activity]
GO:0015297 [antiporter activity]
GO:0015698 [inorganic anion transport]
GO:0015701 [bicarbonate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0030316 [osteoclast differentiation]
GO:0032956 [regulation of actin cytoskeleton organization]
GO:0043377 [negative regulation of CD8-positive, alpha-beta T cell differentiation]
GO:0045124 [regulation of bone resorption]
GO:0050801 [ion homeostasis]
GO:0051453 [regulation of intracellular pH]
GO:0055085 [transmembrane transport]
GO:0070175 [positive regulation of enamel mineralization]
GO:0097186 [amelogenesis]
GO:0098656 [anion transmembrane transport]
GO:0140900 []
GO:1902476 [chloride transmembrane transport]
GO:2000565 [negative regulation of CD8-positive, alpha-beta T cell proliferation]
Show all
1232 aa
136.2 kDa
No >9
SLC4A2-202
ENSP00000405600
ENST00000413384
P04920
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006811 [ion transport]
GO:0006820 [anion transport]
GO:0007283 [spermatogenesis]
GO:0008509 [anion transmembrane transporter activity]
GO:0015297 [antiporter activity]
GO:0015698 [inorganic anion transport]
GO:0015701 [bicarbonate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0019899 [enzyme binding]
GO:0022857 [transmembrane transporter activity]
GO:0030316 [osteoclast differentiation]
GO:0032956 [regulation of actin cytoskeleton organization]
GO:0043377 [negative regulation of CD8-positive, alpha-beta T cell differentiation]
GO:0045124 [regulation of bone resorption]
GO:0048565 [digestive tract development]
GO:0050801 [ion homeostasis]
GO:0051453 [regulation of intracellular pH]
GO:0055085 [transmembrane transport]
GO:0070175 [positive regulation of enamel mineralization]
GO:0097186 [amelogenesis]
GO:0098656 [anion transmembrane transport]
GO:0140900 []
GO:1902476 [chloride transmembrane transport]
GO:2000565 [negative regulation of CD8-positive, alpha-beta T cell proliferation]
Show all
1241 aa
137 kDa
No >9
SLC4A2-204
ENSP00000419164
ENST00000461735
P04920
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006811 [ion transport]
GO:0006820 [anion transport]
GO:0008509 [anion transmembrane transporter activity]
GO:0015297 [antiporter activity]
GO:0015698 [inorganic anion transport]
GO:0015701 [bicarbonate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0030316 [osteoclast differentiation]
GO:0032956 [regulation of actin cytoskeleton organization]
GO:0043377 [negative regulation of CD8-positive, alpha-beta T cell differentiation]
GO:0045124 [regulation of bone resorption]
GO:0050801 [ion homeostasis]
GO:0051453 [regulation of intracellular pH]
GO:0055085 [transmembrane transport]
GO:0070175 [positive regulation of enamel mineralization]
GO:0097186 [amelogenesis]
GO:0098656 [anion transmembrane transport]
GO:0140900 []
GO:1902476 [chloride transmembrane transport]
GO:2000565 [negative regulation of CD8-positive, alpha-beta T cell proliferation]
Show all
1227 aa
135.6 kDa
No >9
SLC4A2-205
ENSP00000418584
ENST00000463414
C9J035
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0006820 [anion transport]
GO:0015698 [inorganic anion transport]
GO:0016020 [membrane]
Show all
150 aa
16.4 kDa
No 0
SLC4A2-212
ENSP00000419379
ENST00000482950
C9JVC2
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0006820 [anion transport]
GO:0015698 [inorganic anion transport]
GO:0016020 [membrane]
Show all
127 aa
14.1 kDa
No 0
SLC4A2-213
ENSP00000417808
ENST00000483786
C9J722
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0006820 [anion transport]
GO:0015698 [inorganic anion transport]
GO:0016020 [membrane]
Show all
145 aa
15.9 kDa
No 0
SLC4A2-214
ENSP00000419412
ENST00000485713
P04920
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006811 [ion transport]
GO:0006820 [anion transport]
GO:0008509 [anion transmembrane transporter activity]
GO:0015297 [antiporter activity]
GO:0015698 [inorganic anion transport]
GO:0015701 [bicarbonate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0030316 [osteoclast differentiation]
GO:0032956 [regulation of actin cytoskeleton organization]
GO:0043377 [negative regulation of CD8-positive, alpha-beta T cell differentiation]
GO:0045124 [regulation of bone resorption]
GO:0050801 [ion homeostasis]
GO:0051453 [regulation of intracellular pH]
GO:0055085 [transmembrane transport]
GO:0070175 [positive regulation of enamel mineralization]
GO:0097186 [amelogenesis]
GO:0098656 [anion transmembrane transport]
GO:0140900 []
GO:1902476 [chloride transmembrane transport]
GO:2000565 [negative regulation of CD8-positive, alpha-beta T cell proliferation]
Show all
1241 aa
137 kDa
No >9
SLC4A2-215
ENSP00000417221
ENST00000488420
C9J459
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0006820 [anion transport]
GO:0015698 [inorganic anion transport]
GO:0016020 [membrane]
Show all
70 aa
7.6 kDa
No 0
SLC4A2-216
ENSP00000418114
ENST00000490898
C9J9M9
[Direct mapping] Anion exchange protein 2
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0006820 [anion transport]
GO:0015698 [inorganic anion transport]
GO:0016020 [membrane]
Show all
169 aa
18.6 kDa
No 0

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