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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:273.9 nTPM
HPA Brain:241.8 nTPM
GTEx:273.9 nTPM
FANTOM5:538.2 Scaled Tags Per Million
Pig:76.2 nTPM
Mouse:173.3 nTPM
Allen mouse:0.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027132
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

241.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 213.2
2481 Female, age 94, left hemisphere 368.5
2288 Male, age 75, left hemisphere 215.0
2289 Male, age 61, right hemisphere 211.1
2290 Female, age 72, unknown 196.3
1781 Male, age 74, unknown 195.3
1857 Female, age 85, left hemisphere 186.0
1854 Male, age 80, left hemisphere 180.1
2846 Female, age 79, unknown 152.9
Globus pallidus, externus
nTPM: 241.8
1996 Male, age 80, right hemisphere 290.6
2646 Male, age 61, right hemisphere 283.1
2567 Female, age 72, unknown 224.7
2772 Female, age 79, unknown 216.5
2395 Male, age 75, both hemispheres 194.2
Globus pallidus, internus
nTPM: 240.0
2483 Female, age 94, right hemisphere 366.7
2287 Male, age 75, right hemisphere 260.7
2037 Male, age 80, right hemisphere 248.3
1818 Male, age 74, unknown 233.9
2111 Female, age 85, right hemisphere 198.7
2778 Female, age 91, both hemispheres 190.2
2566 Female, age 72, unknown 181.3
Nucleus accumbens
nTPM: 150.5
2391 Female, age 94, left hemisphere 200.2
2286 Male, age 75, left hemisphere 199.0
1806 Female, age 85, left hemisphere 156.3
2698 Female, age 72, unknown 141.3
1783 Male, age 74, unknown 140.2
2732 Male, age 80, right hemisphere 129.8
1856 Female, age 91, right hemisphere 125.7
2824 Male, age 61, right hemisphere 111.6
Nucleus basalis of Meynert
nTPM: 218.5
2569 Male, age 61, both hemispheres 326.4
2484 Female, age 94, left hemisphere 231.0
2393 Male, age 80, right hemisphere 180.9
2821 Male, age 75, both hemispheres 135.8
Nucleus of the diagonal band
nTPM: 176.1
2775 Male, age 80, right hemisphere 204.2
1812 Female, age 91, both hemispheres 183.2
1979 Male, age 74, unknown 174.5
2195 Female, age 85, both hemispheres 163.1
2029 Male, age 61, right hemisphere 155.4
Putamen
nTPM: 197.7
2482 Female, age 94, left hemisphere 292.3
2647 Male, age 75, left hemisphere 240.2
2489 Female, age 72, unknown 237.4
2466 Female, age 79, unknown 171.0
1829 Male, age 74, unknown 159.6
1937 Female, age 91, right hemisphere 142.7
1838 Male, age 80, right hemisphere 140.9
Septal nuclei
nTPM: 180.6
2031 Female, age 72, unknown 215.6
2199 Male, age 80, right hemisphere 203.9
2059 Female, age 85, both hemispheres 190.8
1960 Male, age 74, unknown 181.2
2394 Male, age 61, left hemisphere 179.7
2009 Female, age 91, both hemispheres 164.7
2629 Female, age 94, right hemisphere 128.5
Stria terminalis, bed nucleus
nTPM: 175.8
1974 Female, age 91, both hemispheres 195.9
2201 Male, age 74, unknown 193.7
2486 Female, age 94, both hemispheres 137.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

273.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 240.0
Samples: 246

Max nTPM: 570.4
Min nTPM: 60.2
Std nTPM: 95.0
Median nTPM: 214.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 570.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 506.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 499.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 489.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 478.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 474.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 460.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 459.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 453.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 446.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 444.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 439.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 437.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 429.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 428.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 419.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 415.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 415.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 406.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 402.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 398.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 391.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 386.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 376.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 372.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 369.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 357.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 355.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 353.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 350.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 349.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 349.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 349.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 345.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 345.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 343.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 342.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 342.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 340.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 339.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 337.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 328.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 327.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 326.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 325.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 323.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 322.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 320.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 319.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 318.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 317.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 315.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 314.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 313.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 313.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 313.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 312.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 311.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 310.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 310.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 301.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 300.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 300.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 298.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 295.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 294.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 293.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 287.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 287.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 286.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 285.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 284.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 283.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 282.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 281.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 278.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 273.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 272.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 271.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 269.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 269.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 268.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 268.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 266.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 265.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 265.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 263.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 259.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 258.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 257.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 256.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 255.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 252.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 250.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 249.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 249.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 243.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 242.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 241.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 239.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 239.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 238.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 235.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 234.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 234.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 233.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 231.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 231.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 229.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 228.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 225.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 221.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 221.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 218.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 218.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 218.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 218.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 217.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 216.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 216.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 216.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 215.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 214.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 213.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 212.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 211.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 211.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 210.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 207.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 205.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 204.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 204.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 204.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 204.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 203.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 202.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 202.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 201.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 200.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 200.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 200.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 199.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 199.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 198.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 197.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 197.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 196.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 196.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 196.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 196.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 194.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 192.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 192.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 192.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 191.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 191.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 190.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 189.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 189.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 188.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 186.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 186.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 186.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 185.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 182.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 182.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 182.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 181.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 181.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 181.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 181.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 180.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 180.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 180.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 180.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 178.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 177.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 177.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 177.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 175.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 173.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 171.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 171.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 169.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 169.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 168.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 168.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 167.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 166.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 164.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 164.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 164.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 163.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 162.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 161.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 161.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 161.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 160.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 159.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 159.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 159.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 158.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 156.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 156.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 155.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 153.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 152.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 150.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 149.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 147.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 147.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 147.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 146.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 146.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 144.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 144.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 143.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 143.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 141.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 140.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 139.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 139.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 137.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 136.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 136.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 135.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 135.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 133.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 132.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 132.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 127.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 123.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 119.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 116.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 115.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 113.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 111.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 110.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 104.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 104.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 98.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 96.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 87.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 63.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 60.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 155.5
Samples: 246

Max nTPM: 418.2
Min nTPM: 51.8
Std nTPM: 64.5
Median nTPM: 139.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 418.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 416.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 385.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 373.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 360.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 334.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 303.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 301.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 299.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 290.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 278.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 270.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 268.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 266.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 265.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 259.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 258.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 257.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 257.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 255.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 250.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 249.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 249.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 247.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 246.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 245.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 244.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 240.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 240.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 235.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 229.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 228.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 225.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 225.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 223.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 222.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 221.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 218.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 217.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 215.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 215.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 213.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 213.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 211.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 211.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 209.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 208.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 208.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 201.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 201.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 200.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 199.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 199.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 199.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 198.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 195.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 193.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 193.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 192.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 189.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 186.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 185.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 184.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 184.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 183.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 182.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 182.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 180.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 180.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 179.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 179.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 178.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 177.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 177.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 177.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 176.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 174.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 173.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 172.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 171.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 167.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 166.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 164.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 163.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 162.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 162.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 161.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 161.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 160.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 159.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 159.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 159.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 159.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 157.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 157.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 155.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 155.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 155.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 155.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 154.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 154.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 152.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 152.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 151.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 150.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 147.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 147.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 147.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 146.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 145.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 144.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 144.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 144.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 144.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 144.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 144.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 143.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 142.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 142.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 140.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 140.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 140.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 140.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 139.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 139.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 138.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 138.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 137.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 135.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 135.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 134.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 134.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 134.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 133.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 132.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 132.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 131.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 131.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 131.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 130.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 130.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 130.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 130.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 129.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 128.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 128.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 128.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 128.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 127.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 126.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 126.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 125.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 124.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 124.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 124.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 124.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 123.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 123.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 123.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 122.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 122.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 122.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 122.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 121.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 121.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 120.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 119.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 119.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 118.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 118.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 118.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 118.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 116.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 116.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 114.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 112.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 111.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 111.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 111.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 110.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 110.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 110.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 109.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 109.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 108.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 107.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 106.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 106.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 106.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 105.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 105.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 105.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 104.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 104.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 103.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 102.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 102.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 102.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 101.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 101.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 100.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 99.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 99.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 98.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 98.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 98.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 97.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 96.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 96.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 96.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 95.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 94.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 94.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 94.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 94.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 94.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 93.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 92.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 88.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 87.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 87.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 87.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 86.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 85.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 84.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 84.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 83.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 83.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 83.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 82.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 82.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 82.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 82.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 82.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 82.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 82.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 81.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 80.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 76.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 76.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 75.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 73.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 71.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 67.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 61.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 51.8
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Brain - Putamen (basal ganglia)
Average nTPM: 273.9
Samples: 205

Max nTPM: 817.2
Min nTPM: 72.9
Std nTPM: 115.6
Median nTPM: 253.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 817.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 583.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 578.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 567.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 565.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 555.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 540.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 531.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 512.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 471.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 463.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 461.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 455.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 452.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 441.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 435.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 435.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 429.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 428.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 428.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 426.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 422.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 421.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 421.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 418.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 414.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 401.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 400.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 400.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 398.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 390.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 387.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 386.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 386.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 383.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 378.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 378.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 378.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 375.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 374.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 369.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 367.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 366.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 363.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 359.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 358.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 357.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 356.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 353.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 349.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 348.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 341.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 341.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 341.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 339.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 336.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 332.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 331.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 330.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 327.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 325.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 324.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 322.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 321.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 319.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 319.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 317.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 305.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 302.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 301.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 301.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 299.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 298.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 298.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 297.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 296.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 294.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 287.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 286.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 284.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 284.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 283.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 281.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 279.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 278.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 271.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 270.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 269.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 266.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 266.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 266.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 266.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 266.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 266.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 264.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 262.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 262.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 261.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 260.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 256.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 255.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 254.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 253.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 252.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 251.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 251.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 250.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 249.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 249.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 245.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 244.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 242.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 241.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 241.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 238.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 237.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 236.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 235.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 235.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 234.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 234.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 232.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 231.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 229.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 227.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 225.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 222.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 221.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 221.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 220.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 220.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 219.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 214.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 212.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 212.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 211.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 211.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 210.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 210.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 208.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 208.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 207.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 207.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 206.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 206.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 205.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 205.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 204.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 204.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 203.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 202.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 198.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 197.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 193.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 191.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 188.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 185.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 185.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 185.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 183.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 182.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 181.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 181.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 176.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 176.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 173.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 173.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 172.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 171.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 168.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 168.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 167.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 167.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 167.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 165.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 162.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 161.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 159.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 157.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 156.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 152.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 148.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 147.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 142.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 134.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 132.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 132.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 132.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 129.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 129.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 127.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 126.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 116.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 114.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 111.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 106.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 106.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 105.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 99.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 97.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 95.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 93.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 83.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 72.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

538.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 264.5
FF:10164-103B2 76 years, female 264.5
Nucleus accumbens
Scaled Tags Per Million: 284.8
FF:10037-101F1 23-56 years, mixed 284.8
Putamen
Scaled Tags Per Million: 259.1
FF:10176-103C5 60 years, female 259.1
Globus pallidus
Scaled Tags Per Million: 538.2
FF:10175-103C4 60 years, female 610.5
FF:10161-103A8 76 years, female 466.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.2
Pig sample Sample description nTPM
Caudate
nTPM: 60.5
Samples: 4

Max nTPM: 68.6
Min nTPM: 50.9
Sample A Female 50.9
Sample B Female 68.6
Sample C Male 64.8
Sample D Male 57.8
Putamen
nTPM: 66.8
Samples: 4

Max nTPM: 75.1
Min nTPM: 59.7
Sample A Female 72.0
Sample B Female 60.4
Sample C Male 75.1
Sample D Male 59.7
Septum
nTPM: 76.2
Samples: 4

Max nTPM: 91.7
Min nTPM: 65.9
Sample A Female 69.1
Sample B Female 78.1
Sample C Male 65.9
Sample D Male 91.7
Ventral pallidum
nTPM: 67.8
Samples: 4

Max nTPM: 79.1
Min nTPM: 59.0
Sample A Female 59.0
Sample B Female 79.1
Sample C Male 73.3
Sample D Male 59.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 144.5
Samples: 4

Max nTPM: 167.5
Min nTPM: 126.6
Sample A Male 126.6
Sample B Male 127.8
Sample C Female 155.9
Sample D Female 167.5
Septum
nTPM: 173.3
Samples: 4

Max nTPM: 209.9
Min nTPM: 150.4
Sample A Male 150.4
Sample B Male 209.9
Sample C Female 170.1
Sample D Female 162.8
Ventral forebrain
nTPM: 161.9
Samples: 4

Max nTPM: 176.1
Min nTPM: 151.7
Sample A Male 159.5
Sample B Male 151.7
Sample C Female 176.1
Sample D Female 160.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.6
69528040 Antisense, RP_050421_03_A03, Mouse strain C57BL/6J (56 days, male) 1.1
73520964 Antisense, RP_051017_04_E04, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.5
69528040 Antisense, RP_050421_03_A03, Mouse strain C57BL/6J (56 days, male) 1.0
73520964 Antisense, RP_051017_04_E04, Mouse strain C57BL/6J (56 days, male) 0.0

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