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CYBB
HPA
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  • CYBB
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CYBB
Synonyms CGD, GP91-PHOX, NOX2
Gene descriptioni

Full gene name according to HGNC.

Cytochrome b-245 beta chain
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband
Chromosome location (bp) 37780018 - 37813461
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000165168 (version 109)
Entrez gene 1536
HGNC HGNC:2578
UniProt P04839 (UniProt - Evidence at protein level)
neXtProt NX_P04839
GeneCards CYBB
Antibodypedia CYBB antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. It is the terminal component of a respiratory chain that transfers single electrons from cytoplasmic NADPH across the plasma membrane to molecular oxygen on the exterior. Also functions as a voltage-gated proton channel that mediates the H(+) currents of resting phagocytes. It participates in the regulation of cellular pH and is blocked by zinc.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Oxidoreductase, Voltage-gated channel
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Electron transport, Ion transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

FAD, Flavoprotein, Heme, Iron, Metal-binding, NADP
Gene summary (Entrez)i

Useful information about the gene from Entrez

Cytochrome b (-245) is composed of cytochrome b alpha (CYBA) and beta (CYBB) chain. It has been proposed as a primary component of the microbicidal oxidase system of phagocytes. CYBB deficiency is one of five described biochemical defects associated with chronic granulomatous disease (CGD). In this disorder, there is decreased activity of phagocyte NADPH oxidase; neutrophils are able to phagocytize bacteria but cannot kill them in the phagocytic vacuoles. The cause of the killing defect is an inability to increase the cell's respiration and consequent failure to deliver activated oxygen into the phagocytic vacuole. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CYBB-201
ENSP00000367851
ENST00000378588
P04839
[Direct mapping] Cytochrome b-245 heavy chain
Show all
A0A0S2Z3S6
[Target identity:100%; Query identity:100%] Cytochrome b-245 beta polypeptide isoform 1
Show all
Transporters
   Transport Electron Carriers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005244 [voltage-gated ion channel activity]
GO:0005515 [protein binding]
GO:0005635 [nuclear envelope]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005791 [rough endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0006801 [superoxide metabolic process]
GO:0006811 [ion transport]
GO:0006952 [defense response]
GO:0006954 [inflammatory response]
GO:0007584 [response to nutrient]
GO:0009055 [electron transfer activity]
GO:0009410 [response to xenobiotic stimulus]
GO:0016020 [membrane]
GO:0016175 [superoxide-generating NAD(P)H oxidase activity]
GO:0016491 [oxidoreductase activity]
GO:0020037 [heme binding]
GO:0022900 [electron transport chain]
GO:0030425 [dendrite]
GO:0030670 [phagocytic vesicle membrane]
GO:0032760 [positive regulation of tumor necrosis factor production]
GO:0034220 [ion transmembrane transport]
GO:0034765 [regulation of ion transmembrane transport]
GO:0035579 [specific granule membrane]
GO:0042554 [superoxide anion generation]
GO:0043020 [NADPH oxidase complex]
GO:0043025 [neuronal cell body]
GO:0045087 [innate immune response]
GO:0045335 [phagocytic vesicle]
GO:0045730 [respiratory burst]
GO:0045766 [positive regulation of angiogenesis]
GO:0046872 [metal ion binding]
GO:0046982 [protein heterodimerization activity]
GO:0050660 [flavin adenine dinucleotide binding]
GO:0050664 [oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor]
GO:0050665 [hydrogen peroxide biosynthetic process]
GO:0070821 [tertiary granule membrane]
GO:0071276 [cellular response to cadmium ion]
GO:0071361 [cellular response to ethanol]
GO:0071456 [cellular response to hypoxia]
GO:0072593 [reactive oxygen species metabolic process]
GO:0097038 [perinuclear endoplasmic reticulum]
GO:0097411 [hypoxia-inducible factor-1alpha signaling pathway]
GO:1904044 [response to aldosterone]
GO:1904845 [cellular response to L-glutamine]
GO:1990776 [response to angiotensin]
Show all
570 aa
65.3 kDa
No 7
CYBB-204
ENSP00000512462
ENST00000696171
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
Show all
538 aa
61.3 kDa
No 6

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