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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:38.0 nTPM
HPA Brain:64.7 nTPM
GTEx:38.0 nTPM
FANTOM5:121.5 Scaled Tags Per Million
Pig:91.3 nTPM
Mouse:259.5 nTPM
Allen mouse:10.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012728Antibody HPA012814Antibody CAB005593
Glial cells MediumHighMedium
Neuronal cells MediumHigh-






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 52.3
2481 Female, age 94, left hemisphere 63.8
1854 Male, age 80, left hemisphere 60.1
2290 Female, age 72, unknown 53.6
2846 Female, age 79, unknown 52.0
1781 Male, age 74, unknown 51.3
1857 Female, age 85, left hemisphere 50.2
2288 Male, age 75, left hemisphere 44.3
2289 Male, age 61, right hemisphere 43.1
Globus pallidus, externus
nTPM: 60.3
2395 Male, age 75, both hemispheres 76.5
2772 Female, age 79, unknown 68.9
1996 Male, age 80, right hemisphere 66.2
2646 Male, age 61, right hemisphere 51.2
2567 Female, age 72, unknown 38.7
Globus pallidus, internus
nTPM: 59.8
2287 Male, age 75, right hemisphere 77.8
2778 Female, age 91, both hemispheres 66.9
2483 Female, age 94, right hemisphere 65.9
2037 Male, age 80, right hemisphere 60.3
2111 Female, age 85, right hemisphere 52.2
1818 Male, age 74, unknown 50.0
2566 Female, age 72, unknown 45.7
Nucleus accumbens
nTPM: 57.1
1856 Female, age 91, right hemisphere 68.7
1806 Female, age 85, left hemisphere 62.1
1783 Male, age 74, unknown 58.7
2286 Male, age 75, left hemisphere 58.2
2391 Female, age 94, left hemisphere 56.2
2824 Male, age 61, right hemisphere 52.0
2698 Female, age 72, unknown 51.3
2732 Male, age 80, right hemisphere 50.0
Nucleus basalis of Meynert
nTPM: 51.1
2821 Male, age 75, both hemispheres 58.5
2484 Female, age 94, left hemisphere 50.8
2393 Male, age 80, right hemisphere 48.5
2569 Male, age 61, both hemispheres 46.5
Nucleus of the diagonal band
nTPM: 64.7
1812 Female, age 91, both hemispheres 73.4
2775 Male, age 80, right hemisphere 72.5
2195 Female, age 85, both hemispheres 66.6
2029 Male, age 61, right hemisphere 62.5
1979 Male, age 74, unknown 48.5
Putamen
nTPM: 49.0
2482 Female, age 94, left hemisphere 59.0
1937 Female, age 91, right hemisphere 54.0
2466 Female, age 79, unknown 51.6
1838 Male, age 80, right hemisphere 48.0
1829 Male, age 74, unknown 47.2
2647 Male, age 75, left hemisphere 45.8
2489 Female, age 72, unknown 37.6
Septal nuclei
nTPM: 63.2
2031 Female, age 72, unknown 75.7
1960 Male, age 74, unknown 74.1
2009 Female, age 91, both hemispheres 68.3
2394 Male, age 61, left hemisphere 64.3
2629 Female, age 94, right hemisphere 55.7
2059 Female, age 85, both hemispheres 54.1
2199 Male, age 80, right hemisphere 50.3
Stria terminalis, bed nucleus
nTPM: 60.9
1974 Female, age 91, both hemispheres 68.7
2201 Male, age 74, unknown 57.7
2486 Female, age 94, both hemispheres 56.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 34.7
Samples: 246

Max nTPM: 57.1
Min nTPM: 21.6
Std nTPM: 4.8
Median nTPM: 33.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 57.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 53.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 53.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 51.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 47.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 46.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 46.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 44.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 43.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 43.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 43.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 42.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 42.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 42.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 42.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 41.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 41.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 41.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 41.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 41.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 40.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 40.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 40.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 40.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 40.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 40.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 40.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 40.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 39.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 39.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 39.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 39.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 38.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 38.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 38.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 38.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 38.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 38.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 38.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 38.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 38.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 38.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 37.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 37.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 37.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 37.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 37.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 37.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 37.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 37.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 37.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 37.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 36.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 36.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 36.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 36.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 36.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 36.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 36.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 36.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 36.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 35.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 35.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 35.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 35.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 35.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 35.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 35.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 35.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 35.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 35.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 35.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 35.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 35.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 35.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 35.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 35.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 35.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 35.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 35.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 34.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 34.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 34.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 34.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 34.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 34.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 34.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 34.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 34.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 34.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 34.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 34.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 34.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 34.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 34.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 34.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 34.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 34.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 34.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 34.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 34.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 33.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 33.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 33.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 33.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 33.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 33.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 33.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 33.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 33.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 33.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 33.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 33.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 33.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 33.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 33.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 33.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 33.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 33.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 33.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 33.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 33.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 32.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 32.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 32.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 32.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 32.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 32.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 32.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 32.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 32.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 32.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 32.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 32.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 32.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 32.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 32.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 32.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 32.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 32.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 32.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 32.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 31.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 31.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 31.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 31.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 31.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 31.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 31.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 31.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 31.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 31.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 31.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 31.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 31.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 31.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 31.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 31.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 31.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 31.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 31.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 31.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 31.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 31.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 31.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 31.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 31.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 31.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 31.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 30.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 30.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 30.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 30.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 30.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 30.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 30.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 30.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 30.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 30.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 30.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 30.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 30.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 30.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 30.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 30.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 30.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 30.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 30.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 30.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 30.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 29.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 29.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 29.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 29.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 29.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 29.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 29.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 29.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 28.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 28.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 28.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 28.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 28.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 28.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 28.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 27.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 27.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 27.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 25.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 21.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 38.0
Samples: 246

Max nTPM: 62.5
Min nTPM: 23.7
Std nTPM: 5.5
Median nTPM: 37.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 62.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 58.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 57.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 55.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 54.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 53.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 52.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 52.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 51.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 50.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 49.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 49.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 47.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 47.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 46.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 46.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 46.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 46.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 45.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 45.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 45.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 45.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 45.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 44.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 44.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 44.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 44.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 44.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 43.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 43.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 42.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 42.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 42.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 42.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 42.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 42.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 42.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 42.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 42.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 42.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 42.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 42.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 42.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 41.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 41.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 41.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 41.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 41.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 41.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 41.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 41.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 41.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 41.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 41.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 41.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 41.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 41.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 40.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 40.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 40.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 40.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 40.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 40.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 40.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 40.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 40.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 40.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 40.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 40.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 40.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 39.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 39.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 39.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 39.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 39.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 39.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 39.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 39.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 39.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 39.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 39.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 39.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 39.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 39.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 39.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 39.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 39.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 39.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 39.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 39.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 39.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 39.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 39.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 39.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 39.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 39.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 39.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 39.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 38.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 38.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 38.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 38.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 38.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 38.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 38.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 38.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 38.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 38.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 37.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 37.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 37.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 37.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 37.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 37.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 37.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 37.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 37.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 37.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 37.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 37.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 37.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 37.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 37.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 37.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 37.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 37.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 36.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 36.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 36.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 36.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 36.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 36.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 36.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 36.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 36.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 36.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 36.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 36.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 36.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 36.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 36.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 36.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 35.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 35.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 35.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 35.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 35.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 35.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 35.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 35.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 35.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 35.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 35.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 35.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 35.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 35.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 35.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 35.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 35.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 35.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 35.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 35.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 35.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 35.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 34.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 34.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 34.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 34.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 34.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 34.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 34.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 34.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 34.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 34.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 34.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 34.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 34.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 34.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 34.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 34.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 34.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 33.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 33.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 33.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 33.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 33.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 33.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 33.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 33.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 33.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 33.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 33.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 33.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 33.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 33.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 33.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 33.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 33.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 33.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 33.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 32.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 32.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 32.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 32.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 32.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 32.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 32.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 32.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 32.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 32.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 32.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 32.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 32.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 32.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 32.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 32.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 32.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 32.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 32.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 32.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 31.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 31.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 31.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 31.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 31.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 31.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 31.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 31.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 31.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 30.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 30.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 30.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 30.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 30.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 29.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 29.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 29.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 28.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 27.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 26.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 23.7
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Brain - Putamen (basal ganglia)
Average nTPM: 37.3
Samples: 205

Max nTPM: 62.9
Min nTPM: 26.9
Std nTPM: 5.7
Median nTPM: 36.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 62.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 58.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 55.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 54.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 54.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 50.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 49.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 49.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 48.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 48.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 48.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 47.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 47.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 47.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 46.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 46.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 45.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 45.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 45.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 45.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 44.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 44.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 44.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 43.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 43.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 43.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 43.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 43.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 43.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 43.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 43.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 43.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 42.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 42.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 42.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 41.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 41.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 41.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 41.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 41.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 41.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 41.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 40.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 40.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 40.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 40.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 40.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 40.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 40.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 40.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 39.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 39.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 39.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 39.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 39.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 39.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 39.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 39.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 39.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 39.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 39.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 39.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 39.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 39.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 38.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 38.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 38.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 38.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 38.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 38.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 38.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 38.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 38.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 38.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 38.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 37.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 37.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 37.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 37.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 37.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 37.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 37.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 37.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 37.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 37.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 36.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 36.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 36.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 36.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 36.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 36.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 36.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 36.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 36.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 36.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 36.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 36.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 36.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 36.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 36.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 35.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 35.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 35.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 35.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 35.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 35.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 35.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 35.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 35.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 35.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 35.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 35.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 35.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 35.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 35.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 35.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 34.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 34.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 34.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 34.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 34.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 34.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 34.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 34.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 34.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 34.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 34.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 34.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 34.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 34.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 34.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 33.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 33.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 33.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 33.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 33.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 33.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 33.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 33.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 33.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 33.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 33.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 33.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 33.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 33.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 33.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 33.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 32.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 32.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 32.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 32.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 32.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 32.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 32.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 32.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 32.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 32.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 32.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 32.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 32.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 32.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 32.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 32.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 31.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 31.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 31.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 31.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 31.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 31.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 31.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 31.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 31.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 31.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 31.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 31.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 31.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 31.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 30.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 30.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 30.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 30.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 30.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 30.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 30.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 29.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 29.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 29.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 29.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 28.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 27.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 26.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

121.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 99.2
FF:10164-103B2 76 years, female 99.2
Nucleus accumbens
Scaled Tags Per Million: 118.1
FF:10037-101F1 23-56 years, mixed 118.1
Putamen
Scaled Tags Per Million: 114.0
FF:10176-103C5 60 years, female 114.0
Globus pallidus
Scaled Tags Per Million: 121.5
FF:10175-103C4 60 years, female 142.0
FF:10161-103A8 76 years, female 101.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.3
Pig sample Sample description nTPM
Caudate
nTPM: 80.5
Samples: 4

Max nTPM: 94.1
Min nTPM: 73.9
Sample A Female 73.9
Sample B Female 78.5
Sample C Male 94.1
Sample D Male 75.4
Putamen
nTPM: 91.0
Samples: 4

Max nTPM: 119.4
Min nTPM: 67.9
Sample A Female 89.4
Sample B Female 67.9
Sample C Male 119.4
Sample D Male 87.4
Septum
nTPM: 91.3
Samples: 4

Max nTPM: 125.7
Min nTPM: 74.8
Sample A Female 85.4
Sample B Female 74.8
Sample C Male 125.7
Sample D Male 79.2
Ventral pallidum
nTPM: 89.2
Samples: 4

Max nTPM: 120.5
Min nTPM: 70.1
Sample A Female 70.1
Sample B Female 83.4
Sample C Male 120.5
Sample D Male 82.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

259.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 223.2
Samples: 4

Max nTPM: 227.8
Min nTPM: 216.3
Sample A Male 227.8
Sample B Male 216.3
Sample C Female 224.2
Sample D Female 224.4
Septum
nTPM: 259.5
Samples: 4

Max nTPM: 267.1
Min nTPM: 252.8
Sample A Male 252.8
Sample B Male 264.3
Sample C Female 267.1
Sample D Female 253.7
Ventral forebrain
nTPM: 233.0
Samples: 4

Max nTPM: 244.5
Min nTPM: 214.5
Sample A Male 214.5
Sample B Male 239.2
Sample C Female 244.5
Sample D Female 233.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.5
70194910 Antisense, RP_050517_02_A05, Mouse strain C57BL/6J (56 days, male) 10.5
Pallidum
Expression energy: 10.1
70194910 Antisense, RP_050517_02_A05, Mouse strain C57BL/6J (56 days, male) 10.1

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