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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:504.1 nTPM
GTEx:504.1 nTPM
FANTOM5:2.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB013093
Squamous epithelial cells Medium

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

504.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 504.1
Samples: 156

Max nTPM: 2997.5
Min nTPM: 0.1
Std nTPM: 532.5
Median nTPM: 461.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2997.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2278.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1928.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1846.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1705.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1691.7
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1617.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1575.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1492.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1454.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1403.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1228.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1221.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1164.5
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1137.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1064.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1055.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1050.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1048.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1035.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1025.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 1023.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1013.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 999.1
GTEX-1C475-0526-SM-793AC 40-49 years, female 976.5
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 973.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 951.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 944.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 939.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 902.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 893.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 874.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 867.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 862.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 855.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 855.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 852.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 849.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 842.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 809.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 807.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 799.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 791.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 787.7
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 771.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 737.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 735.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 735.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 734.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 733.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 732.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 731.5
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 713.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 705.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 677.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 673.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 649.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 647.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 626.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 608.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 600.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 595.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 594.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 582.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 551.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 535.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 534.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 527.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 522.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 514.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 511.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 506.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 479.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 479.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 477.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 472.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 465.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 464.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 459.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 445.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 442.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 433.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 396.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 360.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 350.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 343.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 341.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 299.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 297.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 277.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 270.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 216.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 171.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 148.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 146.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 142.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 139.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 106.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 95.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 89.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 82.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 78.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 44.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 42.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 32.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 27.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 23.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 22.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 21.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 21.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 16.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 12.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 11.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 9.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 9.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 8.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 8.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 8.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 7.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 6.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 5.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 4.3
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 3.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 3.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 2.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 2.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 0.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 0.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 0.8
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 0.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 0.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 0.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 0.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 0.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 0.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 0.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 0.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 0.4
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 0.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 0.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 0.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 2.7
FF:10204-103F6 68 years, female 2.7

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