We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HEPACAM
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • HEPACAM
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:50.7 nTPM
HPA Brain:277.8 nTPM
GTEx:50.7 nTPM
FANTOM5:344.6 Scaled Tags Per Million
Pig:157.5 nTPM
Mouse:67.3 nTPM
Allen mouse:2.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB025486
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 188.0
2481 Female, age 94, left hemisphere 255.2
2288 Male, age 75, left hemisphere 230.2
2289 Male, age 61, right hemisphere 215.8
1857 Female, age 85, left hemisphere 192.7
2290 Female, age 72, unknown 179.9
1854 Male, age 80, left hemisphere 160.0
1781 Male, age 74, unknown 146.9
2846 Female, age 79, unknown 123.4
Globus pallidus, externus
nTPM: 277.8
2646 Male, age 61, right hemisphere 374.2
1996 Male, age 80, right hemisphere 312.6
2772 Female, age 79, unknown 284.2
2567 Female, age 72, unknown 251.5
2395 Male, age 75, both hemispheres 166.3
Globus pallidus, internus
nTPM: 254.6
2111 Female, age 85, right hemisphere 282.0
1818 Male, age 74, unknown 274.1
2037 Male, age 80, right hemisphere 262.2
2566 Female, age 72, unknown 248.6
2778 Female, age 91, both hemispheres 248.1
2483 Female, age 94, right hemisphere 241.7
2287 Male, age 75, right hemisphere 225.3
Nucleus accumbens
nTPM: 174.6
2286 Male, age 75, left hemisphere 214.8
1806 Female, age 85, left hemisphere 193.7
2732 Male, age 80, right hemisphere 193.4
2698 Female, age 72, unknown 183.0
2391 Female, age 94, left hemisphere 179.6
2824 Male, age 61, right hemisphere 172.3
1783 Male, age 74, unknown 150.6
1856 Female, age 91, right hemisphere 109.7
Nucleus basalis of Meynert
nTPM: 198.2
2569 Male, age 61, both hemispheres 387.7
2484 Female, age 94, left hemisphere 154.6
2393 Male, age 80, right hemisphere 133.6
2821 Male, age 75, both hemispheres 116.9
Nucleus of the diagonal band
nTPM: 116.7
1979 Male, age 74, unknown 149.8
1812 Female, age 91, both hemispheres 116.2
2195 Female, age 85, both hemispheres 114.6
2029 Male, age 61, right hemisphere 102.5
2775 Male, age 80, right hemisphere 100.3
Putamen
nTPM: 166.3
2647 Male, age 75, left hemisphere 223.5
2482 Female, age 94, left hemisphere 193.8
1829 Male, age 74, unknown 182.3
2489 Female, age 72, unknown 179.8
1937 Female, age 91, right hemisphere 138.8
2466 Female, age 79, unknown 128.0
1838 Male, age 80, right hemisphere 117.9
Septal nuclei
nTPM: 143.6
2059 Female, age 85, both hemispheres 196.8
2394 Male, age 61, left hemisphere 173.4
2199 Male, age 80, right hemisphere 162.6
2629 Female, age 94, right hemisphere 136.9
1960 Male, age 74, unknown 114.8
2009 Female, age 91, both hemispheres 112.8
2031 Female, age 72, unknown 107.8
Stria terminalis, bed nucleus
nTPM: 121.9
2201 Male, age 74, unknown 126.5
1974 Female, age 91, both hemispheres 123.6
2486 Female, age 94, both hemispheres 115.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 50.7
Samples: 246

Max nTPM: 114.3
Min nTPM: 12.3
Std nTPM: 17.2
Median nTPM: 49.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 114.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 93.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 92.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 92.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 91.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 91.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 86.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 84.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 83.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 82.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 81.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 81.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 79.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 78.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 77.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 76.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 76.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 76.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 76.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 76.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 75.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 74.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 74.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 73.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 73.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 73.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 72.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 72.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 71.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 70.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 69.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 69.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 67.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 66.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 66.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 65.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 65.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 65.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 64.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 64.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 63.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 62.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 61.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 61.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 61.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 61.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 61.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 61.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 60.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 60.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 60.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 59.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 59.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 59.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 59.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 59.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 59.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 59.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 58.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 58.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 58.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 57.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 57.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 56.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 56.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 55.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 55.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 55.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 54.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 54.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 54.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 54.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 54.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 53.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 53.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 53.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 53.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 53.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 52.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 52.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 52.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 51.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 51.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 51.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 51.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 50.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 50.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 50.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 50.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 50.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 50.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 50.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 49.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 49.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 49.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 49.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 49.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 48.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 48.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 48.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 48.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 48.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 48.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 47.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 47.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 47.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 46.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 46.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 46.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 46.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 46.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 45.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 45.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 45.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 45.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 44.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 44.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 44.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 44.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 44.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 44.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 44.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 44.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 43.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 43.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 43.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 43.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 43.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 42.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 42.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 42.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 42.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 41.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 41.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 41.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 41.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 40.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 39.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 39.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 39.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 39.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 39.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 39.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 39.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 39.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 39.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 39.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 38.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 38.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 37.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 37.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 36.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 36.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 36.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 36.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 36.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 35.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 34.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 33.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 33.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 33.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 33.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 33.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 32.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 32.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 31.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 31.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 31.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 31.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 31.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 31.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 30.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 30.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 30.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 28.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 28.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 28.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 27.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 27.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 26.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 26.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 26.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 24.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 24.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 24.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 23.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 23.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 23.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 22.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 22.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 21.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 20.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 19.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 13.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 13.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 41.6
Samples: 246

Max nTPM: 134.0
Min nTPM: 12.4
Std nTPM: 15.7
Median nTPM: 37.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 134.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 85.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 81.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 80.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 79.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 78.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 78.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 74.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 73.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 72.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 72.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 72.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 71.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 70.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 69.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 69.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 67.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 67.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 66.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 65.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 65.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 65.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 64.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 63.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 61.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 61.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 61.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 61.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 60.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 60.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 59.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 59.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 58.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 58.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 58.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 58.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 58.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 57.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 57.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 57.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 56.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 56.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 56.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 56.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 55.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 54.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 54.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 53.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 53.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 52.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 52.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 52.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 52.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 52.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 51.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 51.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 51.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 51.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 50.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 50.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 50.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 49.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 49.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 49.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 49.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 49.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 48.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 48.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 47.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 47.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 46.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 46.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 46.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 46.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 46.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 46.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 45.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 45.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 45.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 45.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 45.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 45.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 45.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 45.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 44.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 44.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 44.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 44.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 44.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 44.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 43.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 43.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 43.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 43.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 43.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 43.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 43.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 43.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 42.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 42.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 42.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 41.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 41.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 41.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 41.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 41.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 41.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 41.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 40.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 40.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 40.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 40.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 40.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 40.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 39.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 39.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 39.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 38.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 37.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 37.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 37.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 37.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 36.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 36.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 36.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 36.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 36.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 35.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 35.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 35.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 35.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 35.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 35.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 35.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 35.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 35.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 35.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 34.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 34.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 34.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 34.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 34.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 34.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 33.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 33.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 33.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 33.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 33.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 33.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 33.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 33.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 32.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 32.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 32.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 32.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 32.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 32.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 32.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 32.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 32.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 32.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 31.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 31.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 31.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 31.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 31.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 31.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 31.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 31.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 31.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 30.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 30.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 30.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 30.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 30.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 30.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 30.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 30.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 30.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 30.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 29.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 29.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 29.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 29.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 29.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 29.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 29.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 29.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 29.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 29.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 29.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 29.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 29.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 29.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 28.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 28.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 28.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 28.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 28.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 28.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 28.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 28.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 27.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 27.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 27.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 27.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 27.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 26.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 26.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 26.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 26.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 26.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 25.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 25.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 25.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 25.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 25.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 25.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 25.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 25.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 24.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 24.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 23.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 23.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 22.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 22.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 21.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 21.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 21.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 21.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 20.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 19.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 19.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 19.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 19.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 17.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 15.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 13.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 12.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 46.5
Samples: 205

Max nTPM: 110.6
Min nTPM: 12.4
Std nTPM: 15.9
Median nTPM: 46.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 110.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 103.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 98.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 91.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 82.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 80.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 75.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 74.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 71.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 71.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 71.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 71.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 70.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 70.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 69.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 69.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 68.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 68.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 66.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 66.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 64.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 63.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 63.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 62.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 62.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 62.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 61.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 61.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 61.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 61.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 60.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 60.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 60.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 59.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 59.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 59.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 58.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 58.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 58.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 57.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 57.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 57.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 56.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 56.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 55.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 55.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 55.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 55.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 54.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 53.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 53.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 53.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 53.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 52.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 52.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 52.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 52.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 52.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 52.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 51.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 51.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 51.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 51.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 50.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 50.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 50.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 50.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 50.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 50.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 50.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 49.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 49.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 49.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 49.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 49.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 49.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 49.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 49.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 48.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 48.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 48.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 48.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 48.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 48.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 47.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 47.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 46.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 46.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 46.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 46.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 46.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 46.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 46.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 46.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 45.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 45.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 45.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 44.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 44.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 44.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 43.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 43.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 43.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 43.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 42.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 42.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 42.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 42.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 41.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 41.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 41.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 41.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 41.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 41.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 41.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 40.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 40.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 40.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 40.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 40.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 39.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 39.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 39.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 39.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 39.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 38.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 38.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 38.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 38.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 37.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 37.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 37.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 36.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 35.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 35.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 35.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 35.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 35.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 35.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 35.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 34.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 34.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 34.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 34.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 33.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 33.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 33.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 33.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 33.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 32.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 32.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 32.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 32.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 32.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 31.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 31.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 31.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 31.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 31.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 31.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 30.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 30.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 29.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 29.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 29.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 29.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 29.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 28.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 28.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 27.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 26.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 26.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 25.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 25.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 24.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 23.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 23.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 21.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 20.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 19.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 18.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 15.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 14.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 12.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 12.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

344.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 265.7
FF:10164-103B2 76 years, female 265.7
Nucleus accumbens
Scaled Tags Per Million: 265.5
FF:10037-101F1 23-56 years, mixed 265.5
Putamen
Scaled Tags Per Million: 221.1
FF:10176-103C5 60 years, female 221.1
Globus pallidus
Scaled Tags Per Million: 344.6
FF:10175-103C4 60 years, female 350.0
FF:10161-103A8 76 years, female 339.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.5
Pig sample Sample description nTPM
Caudate
nTPM: 117.7
Samples: 4

Max nTPM: 137.2
Min nTPM: 88.8
Sample A Female 88.8
Sample B Female 137.2
Sample C Male 136.7
Sample D Male 108.1
Putamen
nTPM: 157.5
Samples: 4

Max nTPM: 209.5
Min nTPM: 112.7
Sample A Female 209.5
Sample B Female 112.7
Sample C Male 139.7
Sample D Male 168.2
Septum
nTPM: 116.0
Samples: 4

Max nTPM: 139.1
Min nTPM: 105.1
Sample A Female 108.7
Sample B Female 110.9
Sample C Male 105.1
Sample D Male 139.1
Ventral pallidum
nTPM: 147.3
Samples: 4

Max nTPM: 186.2
Min nTPM: 83.9
Sample A Female 83.9
Sample B Female 145.0
Sample C Male 186.2
Sample D Male 174.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 67.3
Samples: 4

Max nTPM: 69.4
Min nTPM: 65.2
Sample A Male 65.9
Sample B Male 65.2
Sample C Female 69.4
Sample D Female 68.8
Septum
nTPM: 66.8
Samples: 4

Max nTPM: 73.9
Min nTPM: 55.1
Sample A Male 55.1
Sample B Male 69.0
Sample C Female 69.2
Sample D Female 73.9
Ventral forebrain
nTPM: 53.7
Samples: 4

Max nTPM: 57.5
Min nTPM: 48.5
Sample A Male 51.8
Sample B Male 48.5
Sample C Female 57.5
Sample D Female 56.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.8
35 Antisense, RP_Baylor_103286, Mouse strain C57BL/6J (56 days, male) 1.8
36 Antisense, RP_Baylor_103286, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 2.3
35 Antisense, RP_Baylor_103286, Mouse strain C57BL/6J (56 days, male) 2.3
36 Antisense, RP_Baylor_103286, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org