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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:92.0 nTPM
HPA Brain:53.0 nTPM
GTEx:92.0 nTPM
FANTOM5:161.2 Scaled Tags Per Million
Pig:134.2 nTPM
Mouse:131.3 nTPM
Allen mouse:4.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041488Antibody CAB008656
Glial cells LowLow
Neuronal cells MediumHigh



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 53.0
2481 Female, age 94, left hemisphere 70.2
1857 Female, age 85, left hemisphere 60.7
1854 Male, age 80, left hemisphere 54.4
2290 Female, age 72, unknown 52.6
2846 Female, age 79, unknown 51.4
2288 Male, age 75, left hemisphere 50.5
1781 Male, age 74, unknown 45.0
2289 Male, age 61, right hemisphere 39.0
Globus pallidus, externus
nTPM: 52.7
2772 Female, age 79, unknown 78.2
1996 Male, age 80, right hemisphere 63.2
2395 Male, age 75, both hemispheres 59.5
2646 Male, age 61, right hemisphere 40.1
2567 Female, age 72, unknown 22.4
Globus pallidus, internus
nTPM: 52.1
2483 Female, age 94, right hemisphere 65.5
2778 Female, age 91, both hemispheres 61.2
2287 Male, age 75, right hemisphere 60.4
1818 Male, age 74, unknown 56.6
2037 Male, age 80, right hemisphere 56.4
2111 Female, age 85, right hemisphere 36.6
2566 Female, age 72, unknown 27.7
Nucleus accumbens
nTPM: 52.7
2286 Male, age 75, left hemisphere 61.9
1856 Female, age 91, right hemisphere 59.3
1806 Female, age 85, left hemisphere 59.1
2391 Female, age 94, left hemisphere 53.9
1783 Male, age 74, unknown 49.2
2824 Male, age 61, right hemisphere 47.4
2698 Female, age 72, unknown 46.4
2732 Male, age 80, right hemisphere 44.3
Nucleus basalis of Meynert
nTPM: 43.6
2393 Male, age 80, right hemisphere 49.4
2484 Female, age 94, left hemisphere 44.8
2569 Male, age 61, both hemispheres 43.4
2821 Male, age 75, both hemispheres 36.6
Nucleus of the diagonal band
nTPM: 52.0
1812 Female, age 91, both hemispheres 65.3
2775 Male, age 80, right hemisphere 57.6
2029 Male, age 61, right hemisphere 48.6
2195 Female, age 85, both hemispheres 46.0
1979 Male, age 74, unknown 42.5
Putamen
nTPM: 47.1
2466 Female, age 79, unknown 58.0
2482 Female, age 94, left hemisphere 55.0
1937 Female, age 91, right hemisphere 54.9
1838 Male, age 80, right hemisphere 54.3
1829 Male, age 74, unknown 43.8
2647 Male, age 75, left hemisphere 33.2
2489 Female, age 72, unknown 30.3
Septal nuclei
nTPM: 49.9
2031 Female, age 72, unknown 66.0
1960 Male, age 74, unknown 54.1
2009 Female, age 91, both hemispheres 53.1
2394 Male, age 61, left hemisphere 46.5
2059 Female, age 85, both hemispheres 43.7
2199 Male, age 80, right hemisphere 43.0
2629 Female, age 94, right hemisphere 42.6
Stria terminalis, bed nucleus
nTPM: 44.8
1974 Female, age 91, both hemispheres 52.9
2486 Female, age 94, both hemispheres 41.2
2201 Male, age 74, unknown 40.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 92.0
Samples: 246

Max nTPM: 198.9
Min nTPM: 55.3
Std nTPM: 18.8
Median nTPM: 90.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 198.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 174.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 167.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 162.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 159.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 155.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 145.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 140.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 139.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 131.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 126.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 120.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 120.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 116.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 115.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 112.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 112.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 112.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 112.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 111.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 111.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 111.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 111.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 109.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 109.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 108.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 108.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 107.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 107.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 106.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 106.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 106.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 106.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 106.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 105.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 105.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 105.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 104.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 104.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 104.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 103.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 103.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 103.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 102.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 102.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 102.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 102.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 102.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 101.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 101.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 100.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 100.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 100.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 99.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 99.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 99.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 99.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 98.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 98.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 98.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 98.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 98.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 97.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 97.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 97.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 96.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 96.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 96.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 96.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 96.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 96.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 96.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 95.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 95.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 95.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 95.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 95.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 95.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 95.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 95.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 94.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 94.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 94.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 94.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 94.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 94.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 94.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 94.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 93.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 93.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 93.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 93.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 93.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 93.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 93.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 93.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 92.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 92.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 92.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 92.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 92.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 92.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 92.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 92.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 91.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 91.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 91.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 91.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 90.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 90.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 90.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 90.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 90.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 90.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 90.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 90.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 90.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 89.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 89.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 89.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 89.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 89.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 89.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 88.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 88.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 88.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 88.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 87.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 87.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 87.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 87.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 87.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 87.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 87.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 86.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 86.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 86.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 86.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 86.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 86.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 86.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 85.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 85.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 85.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 85.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 85.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 85.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 85.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 85.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 84.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 84.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 84.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 83.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 83.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 83.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 83.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 83.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 83.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 83.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 83.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 82.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 82.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 82.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 82.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 82.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 82.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 81.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 81.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 81.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 81.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 81.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 81.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 81.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 80.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 80.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 80.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 80.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 79.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 79.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 79.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 79.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 79.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 79.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 79.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 79.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 78.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 78.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 78.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 78.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 78.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 78.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 77.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 77.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 77.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 77.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 77.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 77.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 76.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 76.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 76.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 75.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 75.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 74.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 74.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 74.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 74.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 74.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 74.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 74.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 74.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 72.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 72.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 72.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 72.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 70.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 69.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 67.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 67.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 67.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 66.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 66.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 65.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 62.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 61.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 59.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 59.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 58.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 91.3
Samples: 246

Max nTPM: 204.1
Min nTPM: 39.8
Std nTPM: 18.5
Median nTPM: 89.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 204.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 173.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 153.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 137.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 133.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 131.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 130.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 130.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 129.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 127.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 126.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 124.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 119.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 117.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 117.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 115.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 113.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 112.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 111.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 111.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 111.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 111.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 110.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 110.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 109.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 109.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 108.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 108.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 107.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 107.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 107.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 107.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 107.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 106.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 105.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 105.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 104.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 104.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 104.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 104.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 104.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 104.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 104.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 104.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 104.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 104.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 103.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 103.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 103.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 103.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 103.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 103.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 103.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 103.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 103.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 102.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 101.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 101.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 101.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 101.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 101.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 101.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 100.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 100.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 100.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 100.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 100.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 100.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 100.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 100.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 99.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 99.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 99.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 99.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 99.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 99.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 99.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 98.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 98.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 98.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 97.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 97.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 97.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 97.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 97.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 97.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 96.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 96.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 96.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 96.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 95.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 95.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 95.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 94.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 94.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 94.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 94.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 94.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 94.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 94.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 94.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 94.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 93.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 93.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 93.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 93.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 93.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 93.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 93.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 92.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 92.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 92.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 92.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 92.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 91.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 91.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 91.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 91.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 91.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 91.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 90.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 90.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 90.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 89.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 89.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 89.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 89.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 89.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 88.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 88.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 88.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 88.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 88.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 87.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 87.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 87.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 87.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 87.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 87.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 87.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 86.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 86.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 86.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 86.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 86.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 86.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 86.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 86.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 86.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 86.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 85.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 85.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 85.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 85.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 85.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 84.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 84.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 84.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 84.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 84.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 84.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 84.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 84.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 83.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 83.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 83.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 83.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 83.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 82.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 82.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 82.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 82.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 82.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 82.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 81.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 81.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 81.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 81.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 81.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 80.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 80.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 80.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 80.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 80.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 79.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 79.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 79.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 79.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 78.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 78.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 78.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 78.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 78.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 78.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 77.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 77.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 77.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 77.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 76.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 76.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 76.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 76.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 76.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 76.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 76.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 75.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 75.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 74.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 74.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 74.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 74.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 73.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 73.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 72.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 72.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 71.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 71.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 71.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 70.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 70.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 69.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 68.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 68.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 68.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 67.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 67.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 67.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 67.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 67.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 66.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 65.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 64.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 64.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 64.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 63.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 63.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 63.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 63.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 62.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 60.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 58.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 56.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 56.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 56.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 39.8
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Brain - Putamen (basal ganglia)
Average nTPM: 89.2
Samples: 205

Max nTPM: 172.3
Min nTPM: 54.5
Std nTPM: 17.8
Median nTPM: 87.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 172.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 160.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 139.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 134.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 132.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 131.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 129.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 127.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 125.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 121.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 118.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 116.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 115.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 114.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 112.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 112.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 112.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 112.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 111.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 110.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 110.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 108.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 107.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 106.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 106.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 106.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 106.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 106.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 106.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 105.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 105.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 105.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 105.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 105.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 105.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 105.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 104.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 104.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 104.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 103.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 102.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 102.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 102.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 101.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 100.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 100.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 100.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 99.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 99.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 98.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 98.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 98.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 97.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 96.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 96.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 96.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 96.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 95.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 95.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 95.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 95.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 95.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 95.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 95.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 94.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 93.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 93.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 93.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 93.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 93.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 93.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 92.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 92.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 92.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 92.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 92.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 92.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 91.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 91.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 91.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 91.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 91.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 91.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 91.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 90.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 90.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 90.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 89.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 89.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 89.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 89.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 89.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 88.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 88.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 88.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 88.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 88.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 88.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 87.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 87.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 87.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 87.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 87.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 86.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 86.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 86.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 85.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 85.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 85.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 85.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 85.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 85.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 85.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 84.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 84.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 84.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 84.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 83.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 83.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 83.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 83.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 83.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 83.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 83.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 83.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 82.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 82.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 82.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 82.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 82.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 82.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 82.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 82.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 81.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 81.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 81.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 81.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 81.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 80.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 80.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 80.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 80.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 80.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 80.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 79.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 79.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 79.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 79.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 79.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 78.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 78.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 77.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 77.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 77.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 77.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 76.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 76.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 76.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 76.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 76.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 76.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 75.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 75.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 75.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 75.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 74.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 74.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 74.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 74.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 73.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 73.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 73.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 73.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 73.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 72.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 72.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 71.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 71.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 70.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 70.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 69.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 69.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 69.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 69.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 69.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 68.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 67.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 66.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 64.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 64.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 64.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 63.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 62.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 61.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 61.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 59.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 59.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 56.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 55.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 55.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 54.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

161.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 139.6
FF:10164-103B2 76 years, female 139.6
Nucleus accumbens
Scaled Tags Per Million: 149.4
FF:10037-101F1 23-56 years, mixed 149.4
Putamen
Scaled Tags Per Million: 161.2
FF:10176-103C5 60 years, female 161.2
Globus pallidus
Scaled Tags Per Million: 133.8
FF:10175-103C4 60 years, female 137.3
FF:10161-103A8 76 years, female 130.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.2
Pig sample Sample description nTPM
Caudate
nTPM: 122.1
Samples: 4

Max nTPM: 132.7
Min nTPM: 97.4
Sample A Female 132.7
Sample B Female 125.8
Sample C Male 132.6
Sample D Male 97.4
Putamen
nTPM: 134.2
Samples: 4

Max nTPM: 164.4
Min nTPM: 111.7
Sample A Female 143.8
Sample B Female 116.7
Sample C Male 164.4
Sample D Male 111.7
Septum
nTPM: 126.5
Samples: 4

Max nTPM: 138.9
Min nTPM: 115.7
Sample A Female 138.9
Sample B Female 129.5
Sample C Male 115.7
Sample D Male 122.0
Ventral pallidum
nTPM: 119.5
Samples: 4

Max nTPM: 141.7
Min nTPM: 99.9
Sample A Female 120.3
Sample B Female 141.7
Sample C Male 116.0
Sample D Male 99.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 126.7
Samples: 4

Max nTPM: 128.4
Min nTPM: 123.3
Sample A Male 128.4
Sample B Male 123.3
Sample C Female 126.9
Sample D Female 128.1
Septum
nTPM: 125.2
Samples: 4

Max nTPM: 130.7
Min nTPM: 118.8
Sample A Male 121.8
Sample B Male 129.4
Sample C Female 130.7
Sample D Female 118.8
Ventral forebrain
nTPM: 131.3
Samples: 4

Max nTPM: 142.2
Min nTPM: 125.3
Sample A Male 125.3
Sample B Male 129.9
Sample C Female 142.2
Sample D Female 127.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.6
70743842 Antisense, RP_050725_01_G04, Mouse strain C57BL/6J (56 days, male) 6.4
633302 Antisense, RP_040907_02_F10, Mouse strain C57BL/6J (56 days, male) 0.9
Pallidum
Expression energy: 4.5
70743842 Antisense, RP_050725_01_G04, Mouse strain C57BL/6J (56 days, male) 7.1
633302 Antisense, RP_040907_02_F10, Mouse strain C57BL/6J (56 days, male) 1.8

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