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PACSIN3
HPA
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  • PACSIN3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PACSIN3
Synonyms SDPIII
Gene descriptioni

Full gene name according to HGNC.

Protein kinase C and casein kinase substrate in neurons 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband p11.2
Chromosome location (bp) 47177522 - 47186443
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000165912 (version 109)
Entrez gene 29763
HGNC HGNC:8572
UniProt Q9UKS6 (UniProt - Evidence at protein level)
neXtProt NX_Q9UKS6
GeneCards PACSIN3
Antibodypedia PACSIN3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plays a role in endocytosis and regulates internalization of plasma membrane proteins. Overexpression impairs internalization of SLC2A1/GLUT1 and TRPV4 and increases the levels of SLC2A1/GLUT1 and TRPV4 at the cell membrane. Inhibits the TRPV4 calcium channel activity (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Endocytosis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Lipid-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is a member of the protein kinase C and casein kinase substrate in neurons family. The encoded protein is involved in linking the actin cytoskeleton with vesicle formation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PACSIN3-201
ENSP00000298838
ENST00000298838
Q9UKS6
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006897 [endocytosis]
GO:0007010 [cytoskeleton organization]
GO:0008092 [cytoskeletal protein binding]
GO:0008289 [lipid binding]
GO:0016020 [membrane]
GO:0019855 [calcium channel inhibitor activity]
GO:0030100 [regulation of endocytosis]
GO:0042802 [identical protein binding]
GO:0045806 [negative regulation of endocytosis]
GO:0051044 [positive regulation of membrane protein ectodomain proteolysis]
GO:0051926 [negative regulation of calcium ion transport]
GO:0070062 [extracellular exosome]
GO:0097320 [plasma membrane tubulation]
Show all
424 aa
48.5 kDa
No 0
PACSIN3-202
ENSP00000431861
ENST00000524509
E9PJ33
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0097320 [plasma membrane tubulation]
Show all
69 aa
7.8 kDa
No 0
PACSIN3-203
ENSP00000435638
ENST00000525725
E9PJ75
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0097320 [plasma membrane tubulation]
Show all
142 aa
16.2 kDa
No 0
PACSIN3-204
ENSP00000434521
ENST00000528201
E9PQ12
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0097320 [plasma membrane tubulation]
Show all
36 aa
4.3 kDa
No 0
PACSIN3-205
ENSP00000437252
ENST00000528462
A0A0C4DGG1
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0097320 [plasma membrane tubulation]
Show all
405 aa
46.5 kDa
No 0
PACSIN3-206
ENSP00000435672
ENST00000530405
E9PJ33
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0097320 [plasma membrane tubulation]
Show all
69 aa
7.8 kDa
No 0
PACSIN3-207
ENSP00000431924
ENST00000530513
E9PIZ6
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0097320 [plasma membrane tubulation]
Show all
48 aa
5.8 kDa
No 0
PACSIN3-208
ENSP00000434699
ENST00000531226
E9PNM9
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0097320 [plasma membrane tubulation]
Show all
148 aa
17 kDa
No 0
PACSIN3-210
ENSP00000433962
ENST00000533686
H0YDM6
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0097320 [plasma membrane tubulation]
Show all
76 aa
8.2 kDa
No 0
PACSIN3-211
ENSP00000440945
ENST00000539589
Q9UKS6
[Direct mapping] Protein kinase C and casein kinase substrate in neurons protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006897 [endocytosis]
GO:0007010 [cytoskeleton organization]
GO:0008092 [cytoskeletal protein binding]
GO:0008289 [lipid binding]
GO:0016020 [membrane]
GO:0019855 [calcium channel inhibitor activity]
GO:0030100 [regulation of endocytosis]
GO:0042802 [identical protein binding]
GO:0045806 [negative regulation of endocytosis]
GO:0051044 [positive regulation of membrane protein ectodomain proteolysis]
GO:0051926 [negative regulation of calcium ion transport]
GO:0070062 [extracellular exosome]
GO:0097320 [plasma membrane tubulation]
Show all
424 aa
48.5 kDa
No 0

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