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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:153.2 nTPM
HPA Brain:97.2 nTPM
GTEx:153.2 nTPM
FANTOM5:132.7 Scaled Tags Per Million
Pig:58.0 nTPM
Mouse:184.4 nTPM
Allen mouse:5.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006065
Glial cells High

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 88.2
2846 Female, age 79, unknown 118.2
2290 Female, age 72, unknown 104.8
1857 Female, age 85, left hemisphere 91.7
1854 Male, age 80, left hemisphere 86.5
1781 Male, age 74, unknown 85.2
2481 Female, age 94, left hemisphere 81.0
2288 Male, age 75, left hemisphere 76.0
2289 Male, age 61, right hemisphere 62.1
Globus pallidus, externus
nTPM: 79.2
1996 Male, age 80, right hemisphere 85.2
2772 Female, age 79, unknown 84.2
2395 Male, age 75, both hemispheres 80.5
2646 Male, age 61, right hemisphere 76.4
2567 Female, age 72, unknown 70.0
Globus pallidus, internus
nTPM: 77.4
2287 Male, age 75, right hemisphere 94.2
2483 Female, age 94, right hemisphere 92.7
2037 Male, age 80, right hemisphere 76.4
2778 Female, age 91, both hemispheres 76.3
1818 Male, age 74, unknown 74.2
2566 Female, age 72, unknown 65.7
2111 Female, age 85, right hemisphere 62.2
Nucleus accumbens
nTPM: 76.6
1783 Male, age 74, unknown 93.8
1856 Female, age 91, right hemisphere 87.3
2698 Female, age 72, unknown 82.1
1806 Female, age 85, left hemisphere 82.0
2286 Male, age 75, left hemisphere 81.6
2391 Female, age 94, left hemisphere 68.0
2824 Male, age 61, right hemisphere 66.2
2732 Male, age 80, right hemisphere 52.0
Nucleus basalis of Meynert
nTPM: 79.1
2569 Male, age 61, both hemispheres 81.5
2821 Male, age 75, both hemispheres 81.5
2393 Male, age 80, right hemisphere 80.3
2484 Female, age 94, left hemisphere 73.1
Nucleus of the diagonal band
nTPM: 72.5
2775 Male, age 80, right hemisphere 86.8
1812 Female, age 91, both hemispheres 81.4
2029 Male, age 61, right hemisphere 70.6
2195 Female, age 85, both hemispheres 69.8
1979 Male, age 74, unknown 54.2
Putamen
nTPM: 97.2
2466 Female, age 79, unknown 119.5
1829 Male, age 74, unknown 116.3
2489 Female, age 72, unknown 99.0
2647 Male, age 75, left hemisphere 89.3
1838 Male, age 80, right hemisphere 87.1
2482 Female, age 94, left hemisphere 84.8
1937 Female, age 91, right hemisphere 84.7
Septal nuclei
nTPM: 68.0
2031 Female, age 72, unknown 82.9
1960 Male, age 74, unknown 78.0
2629 Female, age 94, right hemisphere 67.0
2059 Female, age 85, both hemispheres 65.9
2009 Female, age 91, both hemispheres 65.7
2199 Male, age 80, right hemisphere 62.3
2394 Male, age 61, left hemisphere 53.9
Stria terminalis, bed nucleus
nTPM: 63.4
1974 Female, age 91, both hemispheres 80.0
2486 Female, age 94, both hemispheres 58.7
2201 Male, age 74, unknown 51.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 138.6
Samples: 246

Max nTPM: 295.2
Min nTPM: 48.9
Std nTPM: 40.0
Median nTPM: 133.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 295.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 267.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 265.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 260.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 257.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 248.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 230.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 230.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 228.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 228.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 225.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 225.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 223.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 218.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 217.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 216.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 214.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 204.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 202.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 201.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 201.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 191.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 184.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 183.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 183.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 183.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 180.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 177.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 177.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 177.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 175.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 175.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 173.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 173.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 173.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 172.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 172.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 171.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 170.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 170.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 169.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 169.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 168.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 168.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 167.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 166.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 165.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 165.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 164.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 164.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 164.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 163.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 162.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 161.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 161.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 160.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 160.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 159.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 159.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 159.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 158.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 157.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 157.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 156.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 156.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 155.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 155.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 154.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 154.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 153.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 153.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 153.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 152.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 152.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 152.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 152.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 152.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 151.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 151.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 151.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 151.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 150.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 150.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 150.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 149.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 149.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 148.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 148.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 148.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 148.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 148.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 147.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 145.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 145.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 144.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 144.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 144.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 144.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 142.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 142.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 142.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 141.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 140.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 140.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 140.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 140.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 139.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 138.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 138.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 138.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 138.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 137.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 137.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 137.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 136.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 135.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 135.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 135.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 134.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 133.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 133.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 133.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 133.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 133.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 133.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 133.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 132.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 132.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 132.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 132.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 132.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 131.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 130.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 130.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 130.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 130.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 129.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 129.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 128.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 128.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 127.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 127.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 126.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 126.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 126.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 126.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 125.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 125.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 125.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 123.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 122.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 122.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 122.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 121.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 121.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 121.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 121.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 120.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 120.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 120.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 119.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 118.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 117.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 117.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 116.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 116.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 114.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 114.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 114.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 114.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 114.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 114.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 113.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 113.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 112.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 111.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 110.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 110.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 110.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 110.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 109.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 109.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 109.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 109.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 108.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 108.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 108.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 108.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 108.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 108.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 108.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 107.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 107.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 107.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 106.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 106.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 106.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 105.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 105.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 105.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 105.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 104.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 104.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 103.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 103.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 103.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 103.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 101.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 100.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 100.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 99.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 98.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 98.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 97.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 96.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 96.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 96.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 95.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 95.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 93.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 92.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 91.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 91.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 90.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 89.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 87.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 87.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 86.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 84.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 82.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 81.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 80.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 78.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 72.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 70.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 65.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 65.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 59.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 48.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 115.1
Samples: 246

Max nTPM: 208.0
Min nTPM: 58.9
Std nTPM: 29.1
Median nTPM: 109.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 208.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 205.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 205.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 203.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 203.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 198.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 188.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 185.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 184.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 180.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 180.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 177.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 176.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 173.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 172.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 168.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 166.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 166.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 156.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 156.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 156.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 155.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 154.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 154.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 150.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 150.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 149.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 149.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 148.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 148.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 147.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 145.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 145.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 143.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 143.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 143.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 142.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 142.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 142.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 142.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 141.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 141.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 139.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 139.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 139.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 138.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 138.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 138.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 137.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 137.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 135.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 134.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 134.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 134.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 133.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 133.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 133.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 132.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 131.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 131.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 131.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 131.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 131.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 130.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 130.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 130.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 130.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 129.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 129.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 128.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 127.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 127.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 127.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 127.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 127.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 126.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 126.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 126.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 125.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 125.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 124.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 124.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 124.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 121.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 121.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 121.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 121.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 120.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 120.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 120.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 119.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 119.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 118.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 118.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 118.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 117.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 116.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 116.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 116.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 115.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 114.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 114.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 114.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 114.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 114.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 114.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 114.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 113.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 113.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 112.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 112.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 112.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 112.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 111.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 111.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 111.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 111.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 111.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 111.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 110.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 110.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 110.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 109.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 109.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 109.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 109.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 109.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 109.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 108.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 108.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 108.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 108.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 107.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 107.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 107.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 107.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 107.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 106.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 106.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 106.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 106.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 106.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 105.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 105.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 105.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 105.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 104.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 104.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 104.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 104.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 103.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 102.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 102.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 102.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 102.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 101.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 101.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 101.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 100.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 100.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 100.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 100.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 99.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 99.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 99.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 99.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 99.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 98.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 98.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 98.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 98.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 97.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 97.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 97.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 97.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 96.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 96.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 95.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 95.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 95.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 95.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 95.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 94.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 94.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 94.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 94.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 94.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 93.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 93.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 93.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 92.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 92.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 92.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 92.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 91.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 91.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 91.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 90.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 90.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 90.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 89.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 89.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 89.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 89.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 88.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 87.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 87.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 87.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 87.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 87.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 86.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 86.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 85.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 85.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 85.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 85.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 85.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 84.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 84.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 84.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 83.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 83.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 83.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 83.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 83.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 82.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 80.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 79.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 79.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 78.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 77.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 77.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 76.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 76.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 76.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 76.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 75.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 74.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 74.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 72.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 69.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 69.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 68.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 67.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 61.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 58.9
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Brain - Putamen (basal ganglia)
Average nTPM: 153.2
Samples: 205

Max nTPM: 295.4
Min nTPM: 78.1
Std nTPM: 36.0
Median nTPM: 147.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 295.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 276.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 247.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 241.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 234.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 215.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 214.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 213.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 212.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 211.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 211.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 209.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 209.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 207.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 207.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 206.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 205.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 204.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 203.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 202.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 200.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 199.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 198.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 197.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 197.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 197.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 196.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 196.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 196.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 195.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 193.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 193.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 191.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 191.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 191.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 190.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 189.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 189.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 188.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 187.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 187.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 187.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 187.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 185.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 182.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 182.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 182.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 182.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 181.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 180.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 180.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 178.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 176.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 175.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 174.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 174.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 173.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 173.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 171.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 171.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 171.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 170.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 168.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 166.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 166.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 166.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 166.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 166.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 165.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 165.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 164.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 164.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 163.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 162.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 161.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 161.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 159.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 159.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 159.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 159.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 159.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 158.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 158.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 157.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 157.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 157.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 157.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 156.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 155.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 155.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 155.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 155.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 154.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 153.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 153.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 152.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 152.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 150.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 149.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 149.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 149.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 148.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 147.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 146.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 146.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 145.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 145.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 145.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 145.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 145.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 144.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 143.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 143.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 143.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 143.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 142.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 142.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 142.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 141.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 141.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 141.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 140.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 139.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 138.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 138.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 138.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 137.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 136.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 135.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 135.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 135.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 134.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 134.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 133.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 133.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 133.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 133.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 132.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 132.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 131.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 131.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 131.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 130.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 130.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 129.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 129.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 129.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 129.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 128.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 128.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 128.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 127.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 127.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 127.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 127.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 126.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 126.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 125.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 124.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 124.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 124.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 123.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 122.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 121.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 121.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 120.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 120.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 120.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 118.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 117.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 117.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 117.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 117.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 116.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 115.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 115.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 114.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 114.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 114.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 114.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 113.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 112.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 112.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 111.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 110.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 110.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 110.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 108.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 107.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 106.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 105.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 105.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 104.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 104.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 103.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 103.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 102.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 100.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 98.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 98.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 94.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 93.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 86.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 78.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

132.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 92.9
FF:10164-103B2 76 years, female 92.9
Nucleus accumbens
Scaled Tags Per Million: 132.7
FF:10037-101F1 23-56 years, mixed 132.7
Putamen
Scaled Tags Per Million: 111.3
FF:10176-103C5 60 years, female 111.3
Globus pallidus
Scaled Tags Per Million: 91.7
FF:10175-103C4 60 years, female 100.4
FF:10161-103A8 76 years, female 83.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.0
Pig sample Sample description nTPM
Caudate
nTPM: 47.5
Samples: 4

Max nTPM: 56.3
Min nTPM: 41.0
Sample A Female 41.0
Sample B Female 49.5
Sample C Male 56.3
Sample D Male 43.2
Putamen
nTPM: 58.0
Samples: 4

Max nTPM: 73.1
Min nTPM: 49.2
Sample A Female 55.2
Sample B Female 49.2
Sample C Male 73.1
Sample D Male 54.4
Septum
nTPM: 49.6
Samples: 4

Max nTPM: 57.6
Min nTPM: 42.6
Sample A Female 51.7
Sample B Female 46.3
Sample C Male 57.6
Sample D Male 42.6
Ventral pallidum
nTPM: 49.9
Samples: 4

Max nTPM: 57.4
Min nTPM: 44.2
Sample A Female 45.0
Sample B Female 52.9
Sample C Male 57.4
Sample D Male 44.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 165.3
Samples: 4

Max nTPM: 170.0
Min nTPM: 159.3
Sample A Male 164.5
Sample B Male 159.3
Sample C Female 167.2
Sample D Female 170.0
Septum
nTPM: 184.4
Samples: 4

Max nTPM: 197.4
Min nTPM: 171.4
Sample A Male 174.5
Sample B Male 194.4
Sample C Female 197.4
Sample D Female 171.4
Ventral forebrain
nTPM: 173.4
Samples: 4

Max nTPM: 187.9
Min nTPM: 165.8
Sample A Male 165.8
Sample B Male 166.4
Sample C Female 187.9
Sample D Female 173.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.0
392935 Antisense, RP_040804_02_A06, Mouse strain C57BL/6J (56 days, male) 8.0
70919149 Antisense, RP_050712_04_C08, Mouse strain C57BL/6J (56 days, male) 2.1
73512199 Antisense, RP_050712_04_C08, Mouse strain C57BL/6J (56 days, male) 2.1
Pallidum
Expression energy: 4.1
392935 Antisense, RP_040804_02_A06, Mouse strain C57BL/6J (56 days, male) 6.3
70919149 Antisense, RP_050712_04_C08, Mouse strain C57BL/6J (56 days, male) 2.0
73512199 Antisense, RP_050712_04_C08, Mouse strain C57BL/6J (56 days, male) 2.0

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