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AGBL2
HPA
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  • AGBL2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

AGBL2
Synonyms CCP2, FLJ23598
Gene descriptioni

Full gene name according to HGNC.

AGBL carboxypeptidase 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband p11.2
Chromosome location (bp) 47659591 - 47715389
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000165923 (version 109)
Entrez gene 79841
HGNC HGNC:26296
UniProt Q5U5Z8 (UniProt - Evidence at protein level)
neXtProt NX_Q5U5Z8
GeneCards AGBL2
Antibodypedia AGBL2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Metallocarboxypeptidase that mediates deglutamylation of tubulin and non-tubulin target proteins. Catalyzes the removal of polyglutamate side chains present on the gamma-carboxyl group of glutamate residues within the C-terminal tail of tubulin protein. Specifically cleaves tubulin long-side-chains, while it is not able to remove the branching point glutamate. Also catalyzes the removal of polyglutamate residues from the carboxy-terminus of non-tubulin proteins such as MYLK.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Carboxypeptidase, Hydrolase, Metalloprotease, Protease
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in protein side chain deglutamylation. Located in centriole and ciliary basal body. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
AGBL2-202
ENSP00000435582
ENST00000525123
Q5U5Z8
[Direct mapping] Cytosolic carboxypeptidase 2
Show all
A0A140VKH9
[Target identity:100%; Query identity:100%] ATP/GTP binding protein-like 2, isoform CRA_b; Testis tissue sperm-binding protein Li 96mP
Show all
Enzymes
   Peptidases
   Metallopeptidases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0004180 [carboxypeptidase activity]
GO:0004181 [metallocarboxypeptidase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006508 [proteolysis]
GO:0008233 [peptidase activity]
GO:0008237 [metallopeptidase activity]
GO:0008270 [zinc ion binding]
GO:0016787 [hydrolase activity]
GO:0035610 [protein side chain deglutamylation]
GO:0036064 [ciliary basal body]
GO:0042995 [cell projection]
GO:0046872 [metal ion binding]
Show all
902 aa
104.2 kDa
No 0
AGBL2-204
ENSP00000436630
ENST00000528244
F6U0I4
[Direct mapping] Cytosolic carboxypeptidase 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0004181 [metallocarboxypeptidase activity]
GO:0005829 [cytosol]
GO:0006508 [proteolysis]
GO:0008270 [zinc ion binding]
Show all
824 aa
95.5 kDa
No 0
AGBL2-207
ENSP00000436518
ENST00000529154
E9PI49
[Direct mapping] Cytosolic carboxypeptidase 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
95 aa
11.1 kDa
No 0
AGBL2-209
ENSP00000432264
ENST00000530577
E9PRJ1
[Direct mapping] Cytosolic carboxypeptidase 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
148 aa
17.5 kDa
No 0
AGBL2-210
ENSP00000431835
ENST00000530969
E9PJH3
[Direct mapping] Cytosolic carboxypeptidase 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
32 aa
4 kDa
No 0
AGBL2-212
ENSP00000436063
ENST00000532595
E9PR59
[Direct mapping] Cytosolic carboxypeptidase 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
331 aa
39 kDa
No 0

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