HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:26.0 nTPM
HPA Brain:50.3 nTPM
GTEx:26.0 nTPM
FANTOM5:3.0 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:2.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038044Antibody HPA038045
Glial cells LowNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
1855 Male, age 76, left hemisphere 40.1
2148 Female, age 91, left hemisphere 37.6
1898 Male, age 80, left hemisphere 34.0
1911 Female, age 85, right hemisphere 26.3
2621 Female, age 67, right hemisphere 21.5
2529 Female, age 94, left hemisphere 16.8
Dentate gyrus
nTPM: 38.3
2531 Female, age 67, both hemispheres 68.9
1927 Female, age 91, both hemispheres 55.5
2246 Female, age 85, both hemispheres 35.8
2010 Male, age 76, both hemispheres 35.5
2528 Male, age 74, both hemispheres 27.3
2530 Female, age 94, left hemisphere 7.2
Entorhinal gyrus
nTPM: 13.7
2764 Male, age 80, right hemisphere 30.4
2117 Female, age 91, right hemisphere 11.8
2686 Male, age 75, right hemisphere 11.8
1787 Male, age 76, left hemisphere 11.6
1938 Female, age 85, left hemisphere 10.3
2613 Female, age 94, left hemisphere 6.1
Hippocampus, CA1
nTPM: 50.3
2045 Male, age 76, both hemispheres 107.4
2749 Male, age 80, left hemisphere 44.4
1873 Female, age 85, both hemispheres 37.1
2082 Female, age 91, right hemisphere 35.4
2527 Male, age 74, both hemispheres 26.9
Hippocampus, CA2
nTPM: 20.1
1892 Male, age 76, both hemispheres 39.6
2113 Female, age 91, right hemisphere 27.2
1940 Female, age 85, left hemisphere 17.9
2249 Male, age 74, both hemispheres 15.5
2437 Female, age 94, left hemisphere 11.4
1963 Male, age 80, left hemisphere 8.8
Hippocampus, CA3
nTPM: 43.7
2620 Female, age 94, left hemisphere 64.7
1867 Male, age 76, both hemispheres 55.4
2861 Female, age 67, both hemispheres 44.7
2137 Male, age 80, left hemisphere 38.3
1891 Female, age 85, both hemispheres 35.8
2436 Male, age 74, both hemispheres 23.4
Parahippocampal cortex
nTPM: 26.2
2018 Male, age 76, both hemispheres 41.7
1850 Male, age 80, both hemispheres 41.6
2250 Female, age 67, right hemisphere 32.7
1933 Female, age 85, both hemispheres 32.0
2693 Female, age 94, both hemispheres 31.2
2245 Female, age 91, both hemispheres 28.5
2532 Female, age 72, left hemisphere 27.5
2622 Female, age 67, right hemisphere 14.9
1990 Female, age 91, right hemisphere 7.0
2692 Male, age 74, both hemispheres 5.4
Perirhinal gyrus
nTPM: 40.8
2848 Male, age 76, right hemisphere 46.2
2521 Female, age 94, right hemisphere 41.9
1841 Female, age 85, right hemisphere 40.9
1794 Male, age 80, right hemisphere 40.3
1847 Female, age 91, left hemisphere 34.9
Subiculum
nTPM: 20.8
2729 Female, age 91, right hemisphere 37.9
1901 Male, age 80, both hemispheres 25.2
1977 Female, age 85, both hemispheres 20.8
2042 Male, age 76, both hemispheres 18.6
2438 Female, age 94, left hemisphere 14.6
2619 Male, age 74, both hemispheres 7.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 146.9
Min nTPM: 0.5
Std nTPM: 26.2
Median nTPM: 17.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 146.9
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 119.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 113.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 112.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 111.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 110.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 106.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 100.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 91.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 85.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 80.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 3.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3.0
FF:10169-103B7 60 years, female 3.1
FF:10153-102I9 76 years, female 2.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.9
Pig sample Sample description nTPM
Subiculum
nTPM: 6.8
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.6
Sample A Female 7.1
Sample B Female 5.6
Sample C Male 6.7
Sample D Male 7.7
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.7
Min nTPM: 6.3
Sample A Female 6.9
Sample B Female 6.3
Sample C Male 6.8
Sample D Male 7.7
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.1
Sample A Female 6.8
Sample B Female 4.1
Sample C Male 4.8
Sample D Male 4.5
Ventral hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.6
Sample A Female 5.6
Sample B Female 7.4
Sample C Male 5.7
Sample D Male 6.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.1
Sample A Male 2.9
Sample B Male 2.3
Sample C Female 2.9
Sample D Female 2.1
Hippocampal formation
nTPM: 2.9
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.9
Sample A Male 3.1
Sample B Male 1.9
Sample C Female 3.3
Sample D Female 3.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763849 Antisense, RP_050921_02_G03, Mouse strain C57BL/6J (56 days, male) 0.0

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