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  • HTRA1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:597.6 nTPM
HPA Brain:342.7 nTPM
GTEx:597.6 nTPM
FANTOM5:253.2 Scaled Tags Per Million
Pig:115.5 nTPM
Mouse:21.7 nTPM
Allen mouse:3.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036655
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

342.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 286.6
2481 Female, age 94, left hemisphere 402.3
2288 Male, age 75, left hemisphere 323.8
1857 Female, age 85, left hemisphere 314.4
1854 Male, age 80, left hemisphere 297.1
2290 Female, age 72, unknown 293.3
2289 Male, age 61, right hemisphere 250.0
2846 Female, age 79, unknown 242.9
1781 Male, age 74, unknown 168.9
Globus pallidus, externus
nTPM: 342.7
1996 Male, age 80, right hemisphere 439.6
2646 Male, age 61, right hemisphere 399.4
2772 Female, age 79, unknown 368.5
2395 Male, age 75, both hemispheres 287.1
2567 Female, age 72, unknown 218.8
Globus pallidus, internus
nTPM: 312.1
2037 Male, age 80, right hemisphere 382.1
2778 Female, age 91, both hemispheres 337.1
2111 Female, age 85, right hemisphere 330.6
2287 Male, age 75, right hemisphere 314.9
1818 Male, age 74, unknown 310.7
2483 Female, age 94, right hemisphere 297.5
2566 Female, age 72, unknown 211.7
Nucleus accumbens
nTPM: 242.5
2286 Male, age 75, left hemisphere 364.5
1806 Female, age 85, left hemisphere 301.1
2391 Female, age 94, left hemisphere 268.9
2698 Female, age 72, unknown 220.6
2732 Male, age 80, right hemisphere 206.7
1783 Male, age 74, unknown 198.3
2824 Male, age 61, right hemisphere 190.5
1856 Female, age 91, right hemisphere 189.5
Nucleus basalis of Meynert
nTPM: 290.5
2569 Male, age 61, both hemispheres 468.8
2484 Female, age 94, left hemisphere 264.3
2393 Male, age 80, right hemisphere 233.5
2821 Male, age 75, both hemispheres 195.7
Nucleus of the diagonal band
nTPM: 151.8
1979 Male, age 74, unknown 167.4
1812 Female, age 91, both hemispheres 156.5
2029 Male, age 61, right hemisphere 153.4
2775 Male, age 80, right hemisphere 142.6
2195 Female, age 85, both hemispheres 139.3
Putamen
nTPM: 241.9
2482 Female, age 94, left hemisphere 305.3
2489 Female, age 72, unknown 272.3
2466 Female, age 79, unknown 268.8
1829 Male, age 74, unknown 241.2
1937 Female, age 91, right hemisphere 207.6
1838 Male, age 80, right hemisphere 201.3
2647 Male, age 75, left hemisphere 196.8
Septal nuclei
nTPM: 177.0
2059 Female, age 85, both hemispheres 230.0
2394 Male, age 61, left hemisphere 223.1
2199 Male, age 80, right hemisphere 198.0
2031 Female, age 72, unknown 177.9
1960 Male, age 74, unknown 148.6
2009 Female, age 91, both hemispheres 136.9
2629 Female, age 94, right hemisphere 124.5
Stria terminalis, bed nucleus
nTPM: 132.6
1974 Female, age 91, both hemispheres 139.8
2201 Male, age 74, unknown 135.2
2486 Female, age 94, both hemispheres 122.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

597.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 478.4
Samples: 246

Max nTPM: 1450.4
Min nTPM: 101.3
Std nTPM: 195.5
Median nTPM: 445.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1450.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1123.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1074.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1054.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1046.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1038.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 941.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 886.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 876.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 852.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 825.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 824.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 822.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 812.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 811.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 811.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 796.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 790.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 784.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 775.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 774.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 771.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 764.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 756.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 738.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 721.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 717.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 712.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 709.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 695.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 695.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 694.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 690.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 688.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 684.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 679.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 678.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 672.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 662.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 661.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 658.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 651.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 643.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 632.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 632.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 628.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 623.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 618.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 617.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 615.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 614.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 613.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 612.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 610.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 609.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 605.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 599.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 596.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 596.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 596.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 595.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 576.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 575.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 568.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 567.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 563.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 557.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 552.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 552.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 552.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 551.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 550.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 546.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 546.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 545.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 540.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 539.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 538.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 537.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 537.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 536.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 534.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 534.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 532.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 528.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 527.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 526.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 524.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 522.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 521.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 519.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 517.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 513.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 512.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 511.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 509.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 506.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 506.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 501.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 500.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 499.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 489.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 486.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 481.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 477.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 476.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 474.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 472.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 471.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 468.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 467.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 467.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 465.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 464.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 462.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 461.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 460.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 459.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 459.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 452.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 451.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 448.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 445.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 444.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 444.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 443.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 442.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 441.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 437.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 435.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 430.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 429.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 426.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 421.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 420.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 419.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 419.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 417.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 415.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 413.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 409.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 405.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 404.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 403.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 401.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 395.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 394.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 390.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 387.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 387.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 386.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 385.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 380.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 379.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 378.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 377.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 373.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 372.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 366.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 363.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 362.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 362.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 361.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 359.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 358.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 358.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 358.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 357.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 357.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 356.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 354.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 353.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 349.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 347.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 347.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 346.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 345.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 345.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 342.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 341.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 338.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 338.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 337.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 336.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 335.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 333.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 331.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 330.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 330.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 326.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 326.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 325.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 324.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 324.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 322.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 321.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 321.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 316.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 316.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 314.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 311.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 309.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 304.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 303.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 303.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 299.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 297.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 293.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 291.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 291.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 290.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 289.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 283.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 282.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 281.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 280.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 280.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 279.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 278.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 277.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 274.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 273.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 271.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 269.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 266.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 266.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 265.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 264.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 262.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 259.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 256.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 255.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 250.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 244.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 239.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 231.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 224.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 224.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 218.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 203.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 200.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 196.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 181.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 171.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 127.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 101.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 390.9
Samples: 246

Max nTPM: 1678.7
Min nTPM: 96.6
Std nTPM: 189.6
Median nTPM: 341.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1678.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1089.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 998.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 920.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 881.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 855.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 847.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 791.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 761.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 758.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 753.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 747.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 734.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 729.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 720.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 717.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 713.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 693.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 692.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 691.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 689.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 672.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 665.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 655.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 641.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 638.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 631.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 627.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 620.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 617.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 616.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 609.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 606.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 604.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 599.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 591.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 581.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 549.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 544.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 544.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 543.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 538.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 537.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 529.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 527.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 525.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 522.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 519.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 516.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 516.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 512.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 505.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 502.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 502.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 499.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 499.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 498.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 496.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 487.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 473.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 468.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 458.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 452.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 449.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 445.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 444.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 443.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 442.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 440.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 440.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 437.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 435.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 434.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 432.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 429.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 425.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 420.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 413.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 412.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 412.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 412.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 411.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 410.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 403.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 403.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 403.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 401.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 400.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 400.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 399.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 395.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 393.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 390.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 390.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 386.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 384.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 382.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 377.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 375.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 375.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 374.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 374.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 373.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 371.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 369.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 369.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 365.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 365.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 364.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 362.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 361.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 356.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 353.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 352.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 348.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 348.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 348.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 346.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 346.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 346.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 344.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 343.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 342.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 341.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 341.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 339.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 337.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 336.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 335.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 334.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 334.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 332.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 331.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 331.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 329.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 328.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 323.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 322.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 322.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 322.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 321.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 320.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 320.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 317.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 317.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 317.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 316.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 315.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 314.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 312.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 307.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 305.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 304.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 304.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 301.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 298.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 298.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 297.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 296.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 295.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 290.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 287.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 286.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 285.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 284.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 283.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 282.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 281.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 279.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 279.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 279.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 279.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 279.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 278.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 278.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 277.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 275.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 274.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 273.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 272.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 271.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 270.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 267.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 265.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 263.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 257.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 256.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 256.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 255.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 254.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 254.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 254.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 254.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 252.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 252.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 247.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 245.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 244.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 243.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 242.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 242.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 241.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 240.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 239.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 238.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 238.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 237.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 232.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 232.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 231.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 228.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 228.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 226.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 225.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 224.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 223.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 223.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 220.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 219.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 216.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 213.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 212.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 209.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 209.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 207.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 207.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 205.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 202.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 201.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 200.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 200.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 199.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 197.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 197.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 190.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 190.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 187.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 181.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 180.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 179.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 173.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 167.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 155.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 129.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 109.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 96.6
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Brain - Putamen (basal ganglia)
Average nTPM: 597.6
Samples: 205

Max nTPM: 1668.8
Min nTPM: 161.5
Std nTPM: 265.6
Median nTPM: 532.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1668.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1401.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1335.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1327.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1204.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1197.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1183.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1153.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1148.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1127.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1108.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1106.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1086.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1084.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1050.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 997.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 971.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 966.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 963.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 959.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 954.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 951.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 949.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 948.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 930.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 928.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 924.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 922.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 920.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 899.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 890.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 878.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 864.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 855.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 847.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 823.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 811.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 810.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 808.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 804.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 801.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 800.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 793.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 780.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 779.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 769.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 765.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 761.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 759.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 758.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 749.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 748.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 747.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 742.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 725.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 724.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 724.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 720.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 719.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 719.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 718.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 717.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 711.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 708.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 704.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 703.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 702.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 699.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 697.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 691.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 683.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 677.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 677.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 662.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 647.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 645.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 641.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 634.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 630.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 628.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 628.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 627.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 625.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 623.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 622.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 621.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 619.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 613.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 607.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 603.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 590.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 589.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 580.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 578.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 576.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 574.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 569.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 566.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 564.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 564.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 562.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 550.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 532.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 532.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 526.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 525.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 524.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 521.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 517.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 517.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 513.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 512.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 511.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 509.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 506.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 505.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 496.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 489.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 485.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 481.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 478.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 475.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 474.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 472.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 469.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 469.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 467.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 465.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 464.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 462.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 461.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 459.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 457.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 454.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 453.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 450.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 449.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 441.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 436.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 429.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 422.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 420.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 418.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 416.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 415.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 410.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 407.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 402.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 402.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 400.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 396.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 394.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 394.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 392.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 391.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 390.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 381.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 381.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 378.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 373.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 369.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 368.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 362.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 362.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 361.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 356.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 356.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 354.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 348.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 347.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 347.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 344.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 342.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 340.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 338.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 337.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 334.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 330.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 328.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 324.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 321.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 316.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 316.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 312.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 290.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 289.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 288.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 287.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 285.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 284.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 281.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 274.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 267.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 266.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 264.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 257.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 257.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 255.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 255.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 248.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 241.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 231.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 214.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 188.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 161.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

253.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 236.7
FF:10164-103B2 76 years, female 236.7
Nucleus accumbens
Scaled Tags Per Million: 224.7
FF:10037-101F1 23-56 years, mixed 224.7
Putamen
Scaled Tags Per Million: 226.4
FF:10176-103C5 60 years, female 226.4
Globus pallidus
Scaled Tags Per Million: 253.2
FF:10175-103C4 60 years, female 262.1
FF:10161-103A8 76 years, female 244.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.5
Pig sample Sample description nTPM
Caudate
nTPM: 84.1
Samples: 4

Max nTPM: 97.2
Min nTPM: 70.0
Sample A Female 70.0
Sample B Female 92.0
Sample C Male 97.2
Sample D Male 77.1
Putamen
nTPM: 115.5
Samples: 4

Max nTPM: 139.3
Min nTPM: 86.3
Sample A Female 139.3
Sample B Female 86.3
Sample C Male 130.7
Sample D Male 105.8
Septum
nTPM: 109.8
Samples: 4

Max nTPM: 126.8
Min nTPM: 98.2
Sample A Female 99.7
Sample B Female 98.2
Sample C Male 126.8
Sample D Male 114.6
Ventral pallidum
nTPM: 102.7
Samples: 4

Max nTPM: 134.5
Min nTPM: 69.4
Sample A Female 69.4
Sample B Female 107.6
Sample C Male 134.5
Sample D Male 99.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 20.0
Samples: 4

Max nTPM: 22.3
Min nTPM: 17.4
Sample A Male 20.3
Sample B Male 22.3
Sample C Female 20.1
Sample D Female 17.4
Septum
nTPM: 21.3
Samples: 4

Max nTPM: 24.4
Min nTPM: 17.4
Sample A Male 17.4
Sample B Male 22.5
Sample C Female 24.4
Sample D Female 20.8
Ventral forebrain
nTPM: 21.8
Samples: 4

Max nTPM: 33.3
Min nTPM: 16.5
Sample A Male 18.8
Sample B Male 18.4
Sample C Female 33.3
Sample D Female 16.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.5
68321650 Antisense, RP_041130_02_H01, Mouse strain C57BL/6J (56 days, male) 3.5
Pallidum
Expression energy: 1.8
68321650 Antisense, RP_041130_02_H01, Mouse strain C57BL/6J (56 days, male) 1.8

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