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LIPC
HPA
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  • LIPC
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

LIPC
Synonyms HL, HTGL
Gene descriptioni

Full gene name according to HGNC.

Lipase C, hepatic type
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q21.3
Chromosome location (bp) 58410569 - 58569844
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000166035 (version 109)
Entrez gene 3990
HGNC HGNC:6619
UniProt P11150 (UniProt - Evidence at protein level)
neXtProt NX_P11150
GeneCards LIPC
Antibodypedia LIPC antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the hydrolysis of triglycerides and phospholipids present in circulating plasma lipoproteins, including chylomicrons, intermediate density lipoproteins (IDL), low density lipoproteins (LDL) of large size and high density lipoproteins (HDL), releasing free fatty acids (FFA) and smaller lipoprotein particles 1, 2, 3, 4. Also exhibits lysophospholipase activity (By similarity). Can hydrolyze both neutral lipid and phospholipid substrates but shows a greater binding affinity for neutral lipid substrates than phospholipid substrates (By similarity). In native LDL, preferentially hydrolyzes the phosphatidylcholine species containing polyunsaturated fatty acids at sn-2 position 5.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Heparin-binding, Hydrolase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid degradation, Lipid metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

LIPC encodes hepatic triglyceride lipase, which is expressed in liver. LIPC has the dual functions of triglyceride hydrolase and ligand/bridging factor for receptor-mediated lipoprotein uptake. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
LIPC-201
ENSP00000299022
ENST00000299022
P11150
[Direct mapping] Hepatic triacylglycerol lipase
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of lipid/glycolipid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004465 [lipoprotein lipase activity]
GO:0004620 [phospholipase activity]
GO:0004622 [lysophospholipase activity]
GO:0004806 [triglyceride lipase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005788 [endoplasmic reticulum lumen]
GO:0006629 [lipid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0008201 [heparin binding]
GO:0008203 [cholesterol metabolic process]
GO:0008970 [phospholipase A1 activity]
GO:0016042 [lipid catabolic process]
GO:0016298 [lipase activity]
GO:0016787 [hydrolase activity]
GO:0019433 [triglyceride catabolic process]
GO:0030169 [low-density lipoprotein particle binding]
GO:0030301 [cholesterol transport]
GO:0034185 [apolipoprotein binding]
GO:0034364 [high-density lipoprotein particle]
GO:0034372 [very-low-density lipoprotein particle remodeling]
GO:0034373 [intermediate-density lipoprotein particle remodeling]
GO:0034374 [low-density lipoprotein particle remodeling]
GO:0034375 [high-density lipoprotein particle remodeling]
GO:0034382 [chylomicron remnant clearance]
GO:0034638 [phosphatidylcholine catabolic process]
GO:0042632 [cholesterol homeostasis]
GO:0043691 [reverse cholesterol transport]
GO:0052689 [carboxylic ester hydrolase activity]
GO:0052739 [phosphatidylserine 1-acylhydrolase activity]
GO:0052740 [1-acyl-2-lysophosphatidylserine acylhydrolase activity]
GO:0070328 [triglyceride homeostasis]
GO:0102545 [phosphatidyl phospholipase B activity]
Show all
499 aa
55.9 kDa
Yes 0
LIPC-202
ENSP00000348425
ENST00000356113
P11150
[Direct mapping] Hepatic triacylglycerol lipase
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of lipid/glycolipid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004465 [lipoprotein lipase activity]
GO:0004620 [phospholipase activity]
GO:0004622 [lysophospholipase activity]
GO:0004806 [triglyceride lipase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005788 [endoplasmic reticulum lumen]
GO:0006629 [lipid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0008201 [heparin binding]
GO:0008970 [phospholipase A1 activity]
GO:0016042 [lipid catabolic process]
GO:0016298 [lipase activity]
GO:0016787 [hydrolase activity]
GO:0019433 [triglyceride catabolic process]
GO:0030169 [low-density lipoprotein particle binding]
GO:0034185 [apolipoprotein binding]
GO:0034364 [high-density lipoprotein particle]
GO:0034372 [very-low-density lipoprotein particle remodeling]
GO:0034373 [intermediate-density lipoprotein particle remodeling]
GO:0034374 [low-density lipoprotein particle remodeling]
GO:0034375 [high-density lipoprotein particle remodeling]
GO:0034382 [chylomicron remnant clearance]
GO:0034638 [phosphatidylcholine catabolic process]
GO:0042632 [cholesterol homeostasis]
GO:0043691 [reverse cholesterol transport]
GO:0052689 [carboxylic ester hydrolase activity]
GO:0052739 [phosphatidylserine 1-acylhydrolase activity]
GO:0052740 [1-acyl-2-lysophosphatidylserine acylhydrolase activity]
GO:0070328 [triglyceride homeostasis]
GO:0102545 [phosphatidyl phospholipase B activity]
Show all
499 aa
55.9 kDa
Yes 0
LIPC-203
ENSP00000395569
ENST00000414170
E7EUJ1
[Direct mapping] Hepatic triacylglycerol lipase
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of lipid/glycolipid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004622 [lysophospholipase activity]
GO:0004806 [triglyceride lipase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0006629 [lipid metabolic process]
GO:0008970 [phospholipase A1 activity]
GO:0016298 [lipase activity]
GO:0034364 [high-density lipoprotein particle]
GO:0046872 [metal ion binding]
GO:0052689 [carboxylic ester hydrolase activity]
GO:0052739 [phosphatidylserine 1-acylhydrolase activity]
GO:0052740 [1-acyl-2-lysophosphatidylserine acylhydrolase activity]
GO:0102545 [phosphatidyl phospholipase B activity]
Show all
499 aa
55.6 kDa
Yes 0
LIPC-204
ENSP00000395002
ENST00000433326
E7EUK6
[Direct mapping] Hepatic triacylglycerol lipase
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of lipid/glycolipid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004622 [lysophospholipase activity]
GO:0004806 [triglyceride lipase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0006629 [lipid metabolic process]
GO:0008970 [phospholipase A1 activity]
GO:0016298 [lipase activity]
GO:0034364 [high-density lipoprotein particle]
GO:0046872 [metal ion binding]
GO:0052689 [carboxylic ester hydrolase activity]
GO:0052739 [phosphatidylserine 1-acylhydrolase activity]
GO:0052740 [1-acyl-2-lysophosphatidylserine acylhydrolase activity]
GO:0102545 [phosphatidyl phospholipase B activity]
Show all
438 aa
49 kDa
Yes 0

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