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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:415.8 nTPM
HPA:415.8 nTPM
GTEx:367.5 nTPM
FANTOM5:410.5 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA037575
Cholangiocytes Not detected
Hepatocytes High



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

415.8
N/A
Female, age 60
Liver sample 21
nTPM: 393.5
overview
Male, age 54
Liver sample 23
nTPM: 339.6
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 426.5
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 337.7
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 288.3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 375.4
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 348.6
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 581.5
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 444.1
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 622.4
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

367.5
GTEx sample id Sample description nTPM
Liver
Average nTPM: 367.5
Samples: 226

Max nTPM: 780.7
Min nTPM: 90.2
Std nTPM: 118.4
Median nTPM: 366.9
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 780.7
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 726.2
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 647.5
GTEX-QESD-2026-SM-447BI 20-29 years, male 641.1
GTEX-R53T-0326-SM-48FEC 50-59 years, female 628.5
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 598.7
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 592.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 591.4
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 585.7
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 578.5
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 563.4
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 557.7
GTEX-14JG1-1626-SM-664NH 40-49 years, male 546.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 542.7
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 534.5
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 532.8
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 532.5
GTEX-YECK-1926-SM-4W21H 60-69 years, male 525.5
GTEX-18465-1626-SM-7LG6N 50-59 years, male 525.3
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 516.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 503.8
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 503.1
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 501.3
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 499.6
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 497.3
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 496.4
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 493.6
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 493.2
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 493.1
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 492.3
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 490.9
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 490.4
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 489.8
GTEX-P78B-1326-SM-3P611 40-49 years, female 486.3
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 484.4
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 481.3
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 480.0
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 479.6
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 478.6
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 477.1
GTEX-18A66-2026-SM-7189C 60-69 years, male 476.9
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 476.7
GTEX-14E7W-1526-SM-6871X 70-79 years, male 473.7
GTEX-17HHE-0126-SM-79398 50-59 years, male 471.7
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 470.2
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 466.7
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 464.1
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 464.0
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 463.9
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 462.0
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 461.8
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 460.8
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 460.6
GTEX-144GL-1426-SM-79OMA 50-59 years, male 458.6
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 458.1
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 457.6
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 457.5
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 448.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 446.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 445.5
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 441.6
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 441.0
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 440.4
GTEX-14PHX-0526-SM-664NW 50-59 years, male 439.5
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 433.7
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 432.4
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 430.1
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 428.6
GTEX-RN64-1826-SM-48FDV 50-59 years, male 427.8
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 427.5
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 425.5
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 424.9
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 424.3
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 423.6
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 422.6
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 421.8
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 421.0
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 418.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 416.9
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 416.8
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 414.9
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 414.5
GTEX-18A7A-1526-SM-72D69 50-59 years, female 413.8
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 409.6
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 409.1
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 406.1
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 404.0
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 402.7
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 402.3
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 402.0
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 402.0
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 400.6
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 400.0
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 398.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 398.1
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 398.1
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 397.1
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 392.9
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 390.3
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 389.8
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 386.8
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 384.7
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 382.1
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 379.2
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 376.2
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 375.2
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 371.5
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 371.1
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 370.5
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 370.2
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 369.9
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 369.1
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 368.8
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 365.1
GTEX-13113-1326-SM-5GCOI 60-69 years, female 364.9
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 363.7
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 363.6
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 362.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 361.9
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 359.0
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 357.0
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 356.4
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 355.2
GTEX-X261-1726-SM-4PQYT 50-59 years, male 354.8
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 353.0
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 352.1
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 350.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 350.2
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 350.2
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 349.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 347.8
GTEX-S33H-1626-SM-4AD68 30-39 years, male 341.7
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 340.2
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 339.9
GTEX-17F96-1226-SM-79OK2 70-79 years, male 339.6
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 334.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 333.6
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 333.2
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 332.9
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 330.4
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 329.7
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 326.5
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 318.9
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 317.1
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 314.8
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 314.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 314.4
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 313.3
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 311.7
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 310.2
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 309.8
GTEX-Q734-0326-SM-48U15 40-49 years, female 308.8
GTEX-S32W-1926-SM-4AD63 50-59 years, female 307.8
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 307.8
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 306.7
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 306.2
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 303.9
GTEX-REY6-1226-SM-48FDR 60-69 years, male 301.1
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 300.5
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 299.3
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 297.9
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 297.0
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 296.8
GTEX-12696-0826-SM-5EGGE 60-69 years, male 296.3
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 294.0
GTEX-1B932-1426-SM-793AN 40-49 years, female 293.9
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 290.5
GTEX-1B933-1226-SM-731DW 50-59 years, female 290.1
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 286.7
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 286.2
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 284.8
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 284.0
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 281.8
GTEX-QEL4-1226-SM-447A4 50-59 years, male 280.3
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 278.3
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 274.6
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 270.1
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 268.3
GTEX-O5YV-0726-SM-EV798 60-69 years, female 266.4
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 266.2
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 263.9
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 263.7
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 262.5
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 259.8
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 257.6
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 257.2
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 253.7
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 251.5
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 250.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 249.1
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 248.6
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 247.2
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 244.7
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 243.7
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 230.9
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 230.8
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 224.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 221.2
GTEX-11GSP-0626-SM-5986T 60-69 years, female 220.0
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 219.9
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 218.1
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 216.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 207.8
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 207.4
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 206.4
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 204.9
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 201.7
GTEX-14XAO-0226-SM-68728 60-69 years, female 197.8
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 196.0
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 193.0
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 189.9
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 187.8
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 187.1
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 185.3
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 174.8
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 167.3
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 159.6
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 156.0
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 155.7
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 148.8
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 147.2
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 147.0
GTEX-14PJO-1726-SM-68719 60-69 years, male 135.4
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 135.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 101.3
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 90.2
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

410.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 410.5
FF:10018-101C9 64,69,70 years, mixed 410.5

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