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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:138.0 nTPM
HPA Brain:304.4 nTPM
GTEx:138.0 nTPM
FANTOM5:437.1 Scaled Tags Per Million
Pig:183.7 nTPM
Mouse:412.4 nTPM
Allen mouse:18.6 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012928
Glial cells Not detected
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 168.2
2288 Male, age 75, left hemisphere 201.1
1857 Female, age 85, left hemisphere 200.5
2290 Female, age 72, unknown 192.2
2289 Male, age 61, right hemisphere 181.8
1781 Male, age 74, unknown 176.3
1854 Male, age 80, left hemisphere 156.7
2846 Female, age 79, unknown 132.6
2481 Female, age 94, left hemisphere 104.0
Globus pallidus, externus
nTPM: 41.1
2646 Male, age 61, right hemisphere 55.7
2772 Female, age 79, unknown 52.1
2567 Female, age 72, unknown 36.4
2395 Male, age 75, both hemispheres 35.7
1996 Male, age 80, right hemisphere 25.3
Globus pallidus, internus
nTPM: 35.2
2483 Female, age 94, right hemisphere 60.5
1818 Male, age 74, unknown 60.0
2566 Female, age 72, unknown 47.5
2037 Male, age 80, right hemisphere 30.8
2111 Female, age 85, right hemisphere 20.4
2287 Male, age 75, right hemisphere 14.1
2778 Female, age 91, both hemispheres 13.1
Nucleus accumbens
nTPM: 195.0
1856 Female, age 91, right hemisphere 317.5
2824 Male, age 61, right hemisphere 279.7
1783 Male, age 74, unknown 204.4
1806 Female, age 85, left hemisphere 204.4
2286 Male, age 75, left hemisphere 182.7
2698 Female, age 72, unknown 179.9
2732 Male, age 80, right hemisphere 113.5
2391 Female, age 94, left hemisphere 78.4
Nucleus basalis of Meynert
nTPM: 123.0
2484 Female, age 94, left hemisphere 160.4
2821 Male, age 75, both hemispheres 145.2
2393 Male, age 80, right hemisphere 122.9
2569 Male, age 61, both hemispheres 63.5
Nucleus of the diagonal band
nTPM: 301.0
1812 Female, age 91, both hemispheres 349.2
2195 Female, age 85, both hemispheres 317.8
2029 Male, age 61, right hemisphere 307.0
2775 Male, age 80, right hemisphere 294.2
1979 Male, age 74, unknown 236.9
Putamen
nTPM: 144.2
1937 Female, age 91, right hemisphere 213.5
1838 Male, age 80, right hemisphere 197.9
1829 Male, age 74, unknown 140.0
2647 Male, age 75, left hemisphere 128.6
2466 Female, age 79, unknown 122.6
2482 Female, age 94, left hemisphere 105.6
2489 Female, age 72, unknown 101.5
Septal nuclei
nTPM: 245.7
2629 Female, age 94, right hemisphere 318.7
2009 Female, age 91, both hemispheres 293.7
1960 Male, age 74, unknown 293.1
2031 Female, age 72, unknown 268.1
2059 Female, age 85, both hemispheres 223.3
2394 Male, age 61, left hemisphere 181.7
2199 Male, age 80, right hemisphere 141.4
Stria terminalis, bed nucleus
nTPM: 304.4
1974 Female, age 91, both hemispheres 353.5
2486 Female, age 94, both hemispheres 328.6
2201 Male, age 74, unknown 231.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.9
Samples: 246

Max nTPM: 242.3
Min nTPM: 6.0
Std nTPM: 53.0
Median nTPM: 83.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 242.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 209.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 204.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 196.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 195.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 189.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 187.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 185.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 181.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 179.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 178.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 177.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 176.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 175.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 173.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 172.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 171.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 171.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 169.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 168.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 165.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 161.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 160.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 160.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 157.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 154.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 154.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 154.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 154.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 153.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 152.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 152.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 152.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 150.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 149.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 147.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 147.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 146.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 145.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 145.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 145.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 144.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 143.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 142.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 142.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 141.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 141.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 141.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 138.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 136.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 133.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 132.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 131.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 128.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 127.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 127.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 126.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 124.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 124.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 124.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 121.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 120.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 119.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 119.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 118.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 118.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 116.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 116.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 116.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 115.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 114.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 114.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 114.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 114.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 113.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 111.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 110.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 110.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 109.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 109.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 108.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 107.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 107.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 107.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 107.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 107.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 106.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 105.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 105.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 104.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 104.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 103.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 103.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 103.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 102.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 102.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 101.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 101.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 101.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 100.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 99.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 95.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 93.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 93.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 91.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 90.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 90.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 90.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 89.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 89.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 89.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 88.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 88.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 88.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 87.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 86.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 85.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 85.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 85.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 84.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 84.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 83.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 83.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 81.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 80.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 80.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 80.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 77.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 77.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 76.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 76.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 74.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 72.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 72.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 71.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 71.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 71.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 71.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 69.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 69.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 69.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 69.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 67.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 67.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 66.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 65.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 63.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 62.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 62.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 62.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 60.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 59.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 57.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 55.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 55.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 53.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 53.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 53.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 51.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 51.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 47.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 46.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 44.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 40.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 39.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 38.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 38.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 36.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 34.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 34.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 33.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 33.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 32.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 32.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 32.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 31.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 30.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 29.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 29.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 29.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 28.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 28.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 28.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 26.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 25.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 25.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 25.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 25.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 24.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 23.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 23.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 23.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 22.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 22.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 21.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 20.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 19.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 19.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 18.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 17.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 17.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 17.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 17.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 16.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 16.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 15.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 15.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 13.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 13.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 12.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 12.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 12.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 11.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 11.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 10.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 9.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 9.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 8.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 7.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 7.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 6.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 138.0
Samples: 246

Max nTPM: 375.7
Min nTPM: 1.4
Std nTPM: 76.1
Median nTPM: 141.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 375.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 336.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 307.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 302.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 301.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 283.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 282.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 271.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 270.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 270.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 266.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 264.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 263.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 261.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 261.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 257.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 256.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 255.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 242.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 242.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 241.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 241.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 237.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 234.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 233.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 227.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 226.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 224.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 222.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 220.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 220.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 219.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 219.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 218.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 218.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 215.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 215.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 214.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 214.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 214.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 214.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 213.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 213.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 210.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 210.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 209.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 209.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 209.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 208.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 208.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 207.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 206.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 202.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 199.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 196.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 194.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 194.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 194.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 193.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 192.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 189.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 187.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 187.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 187.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 185.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 184.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 182.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 182.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 182.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 182.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 181.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 181.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 181.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 181.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 180.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 179.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 179.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 178.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 178.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 177.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 176.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 176.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 176.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 176.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 175.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 175.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 172.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 172.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 170.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 169.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 168.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 168.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 166.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 165.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 165.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 164.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 164.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 163.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 163.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 162.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 162.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 162.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 161.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 160.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 160.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 158.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 157.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 157.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 156.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 156.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 155.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 154.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 150.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 150.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 147.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 146.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 145.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 145.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 145.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 142.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 142.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 142.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 141.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 140.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 140.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 140.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 138.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 135.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 135.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 135.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 133.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 132.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 131.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 129.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 129.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 128.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 127.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 126.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 126.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 125.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 124.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 124.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 122.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 121.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 121.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 121.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 120.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 120.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 120.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 119.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 118.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 118.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 118.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 118.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 117.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 117.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 117.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 116.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 115.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 115.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 115.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 112.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 111.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 107.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 103.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 100.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 99.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 98.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 97.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 96.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 96.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 91.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 90.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 90.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 89.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 87.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 84.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 84.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 82.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 82.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 81.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 80.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 79.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 78.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 78.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 77.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 75.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 73.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 72.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 71.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 71.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 68.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 67.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 63.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 63.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 63.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 58.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 55.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 54.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 52.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 52.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 49.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 49.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 47.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 45.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 44.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 44.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 40.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 38.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 37.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 37.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 36.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 36.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 35.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 35.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 34.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 34.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 32.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 30.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 29.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 28.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 25.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 25.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 25.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 24.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 24.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 22.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 21.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 20.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 19.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 19.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 18.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 18.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 16.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 15.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 15.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 14.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 13.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 13.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 9.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 7.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 5.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.4
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Brain - Putamen (basal ganglia)
Average nTPM: 73.0
Samples: 205

Max nTPM: 204.4
Min nTPM: 2.6
Std nTPM: 48.8
Median nTPM: 64.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 204.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 196.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 180.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 175.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 173.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 169.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 168.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 160.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 160.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 156.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 156.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 155.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 155.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 154.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 153.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 151.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 150.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 149.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 147.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 144.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 143.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 142.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 141.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 140.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 139.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 137.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 137.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 136.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 135.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 134.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 134.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 134.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 130.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 130.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 128.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 127.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 126.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 126.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 125.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 125.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 124.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 124.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 123.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 120.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 119.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 119.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 118.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 117.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 115.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 114.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 111.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 111.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 110.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 109.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 108.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 107.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 105.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 103.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 103.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 102.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 99.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 99.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 97.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 97.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 96.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 96.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 95.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 94.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 92.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 92.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 88.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 88.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 88.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 86.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 86.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 85.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 84.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 83.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 83.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 82.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 81.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 81.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 81.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 81.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 79.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 78.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 77.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 76.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 76.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 76.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 74.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 72.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 70.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 69.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 69.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 69.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 66.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 66.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 64.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 63.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 62.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 62.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 60.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 60.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 58.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 57.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 56.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 55.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 55.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 54.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 54.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 54.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 54.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 54.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 54.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 54.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 54.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 52.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 52.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 51.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 51.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 49.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 48.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 48.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 47.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 46.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 44.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 43.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 41.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 40.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 40.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 40.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 37.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 36.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 36.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 36.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 36.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 35.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 35.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 35.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 35.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 33.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 33.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 33.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 32.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 31.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 29.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 28.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 28.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 26.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 26.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 24.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 23.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 23.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 22.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 22.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 22.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 22.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 21.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 20.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 20.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 19.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 19.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 18.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 17.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 17.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 16.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 15.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 15.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 14.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 14.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 13.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 13.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 13.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 12.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 12.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 11.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 10.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 7.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 7.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 4.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

437.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 225.8
FF:10164-103B2 76 years, female 225.8
Nucleus accumbens
Scaled Tags Per Million: 289.9
FF:10037-101F1 23-56 years, mixed 289.9
Putamen
Scaled Tags Per Million: 437.1
FF:10176-103C5 60 years, female 437.1
Globus pallidus
Scaled Tags Per Million: 74.5
FF:10175-103C4 60 years, female 128.7
FF:10161-103A8 76 years, female 20.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.7
Pig sample Sample description nTPM
Caudate
nTPM: 170.6
Samples: 4

Max nTPM: 202.7
Min nTPM: 130.7
Sample A Female 130.7
Sample B Female 179.2
Sample C Male 202.7
Sample D Male 169.9
Putamen
nTPM: 145.4
Samples: 4

Max nTPM: 198.6
Min nTPM: 79.4
Sample A Female 79.4
Sample B Female 134.4
Sample C Male 198.6
Sample D Male 169.1
Septum
nTPM: 183.7
Samples: 4

Max nTPM: 234.0
Min nTPM: 156.9
Sample A Female 159.6
Sample B Female 156.9
Sample C Male 234.0
Sample D Male 184.2
Ventral pallidum
nTPM: 146.4
Samples: 4

Max nTPM: 189.8
Min nTPM: 118.5
Sample A Female 151.0
Sample B Female 118.5
Sample C Male 189.8
Sample D Male 126.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

412.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 118.0
Samples: 4

Max nTPM: 139.6
Min nTPM: 106.4
Sample A Male 106.4
Sample B Male 117.1
Sample C Female 109.0
Sample D Female 139.6
Septum
nTPM: 412.4
Samples: 4

Max nTPM: 438.8
Min nTPM: 383.9
Sample A Male 438.8
Sample B Male 411.0
Sample C Female 383.9
Sample D Female 415.9
Ventral forebrain
nTPM: 200.0
Samples: 4

Max nTPM: 276.0
Min nTPM: 140.8
Sample A Male 140.8
Sample B Male 276.0
Sample C Female 206.3
Sample D Female 176.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.3
70305514 Antisense, RP_050609_04_D06, Mouse strain C57BL/6J (56 days, male) 13.3
73930834 Antisense, RP_051214_04_C09, Mouse strain C57BL/6J (56 days, male) 9.3
Pallidum
Expression energy: 18.6
70305514 Antisense, RP_050609_04_D06, Mouse strain C57BL/6J (56 days, male) 19.8
73930834 Antisense, RP_051214_04_C09, Mouse strain C57BL/6J (56 days, male) 17.4

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