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  • SUMMARY

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  • BRAIN

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  • PKD1L2
BRAIN CEREBRAL CORTEX Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Cerebral cortex
CEREBRAL CORTEX - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:0.1 nTPM
HPA:0.1 nTPM
HPA Brain:3.3 nTPM
HPA PFC Brain:0.4 nTPM
FANTOM5:2.3 Scaled Tags Per Million
Pig:0.8 nTPM
Mouse:0.0 nTPM
Allen mouse:0.4 Expression energy

CEREBRAL CORTEX - Annotated protein expression
Pending normal tissue analysis

CEREBRAL CORTEX - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.1
N/A
Male, age 5
Cerebral cortex sample 48
nTPM: 0
overview
Female, age 40
Cerebral cortex sample 105
nTPM: 0
Cell types%
Neuronal cells:
35

Glial cells and endothelial cells:
65

overview
Male, age 70
Cerebral cortex sample 106
nTPM: 0.4
Cell types%
Neuronal cells:
35

Glial cells and endothelial cells:
65


CEREBRAL CORTEX - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.3
Sample id Sample description nTPM
Angular gyrus
nTPM: 1.6
2103 Male, age 75, left hemisphere 3.1
2265 Female, age 91, left hemisphere 3.0
1866 Male, age 76, both hemispheres 1.6
2602 Female, age 94, right hemisphere 1.4
1790 Male, age 76, right hemisphere 1.2
2260 Female, age 72, left hemisphere 1.0
2221 Female, age 67, right hemisphere 0.8
2722 Male, age 61, left hemisphere 0.8
Anterior cingulate cortex, supragenual-dorsal
nTPM: 1.2
2472 Male, age 75, left hemisphere 1.7
2342 Female, age 94, right hemisphere 1.4
2478 Female, age 67, right hemisphere 1.1
1896 Female, age 85, right hemisphere 1.0
2547 Male, age 74, left hemisphere 1.0
Anterior cingulate cortex, supragenual-ventral
nTPM: 1.9
1950 Female, age 85, right hemisphere 2.4
2479 Female, age 67, right hemisphere 2.3
2538 Male, age 75, left hemisphere 1.9
1755 Female, age 94, right hemisphere 1.6
1761 Male, age 74, left hemisphere 1.5
Anterior insular cortex, dorsal
nTPM: 1.3
2670 Male, age 75, left hemisphere 1.7
2506 Female, age 94, right hemisphere 1.6
2235 Female, age 91, right hemisphere 1.1
2001 Male, age 76, right hemisphere 0.9
Anterior insular cortex, ventral
nTPM: 2.0
2596 Male, age 75, left hemisphere 3.4
2507 Female, age 94, left hemisphere 2.3
1925 Female, age 91, left hemisphere 1.9
2262 Female, age 67, right hemisphere 1.9
1852 Male, age 76, left hemisphere 1.4
2757 Male, age 61, right hemisphere 1.2
Area parastriata, inferior
nTPM: 1.7
2234 Male, age 75, left hemisphere 3.5
1789 Male, age 76, right hemisphere 2.3
2421 Female, age 91, left hemisphere 1.6
2509 Female, age 94, left hemisphere 1.5
2268 Male, age 61, right hemisphere 1.2
1758 Female, age 72, right hemisphere 1.1
1760 Female, age 67, left hemisphere 0.8
Area parastriata, parietal
nTPM: 1.6
2233 Male, age 61, right hemisphere 2.1
1785 Male, age 76, right hemisphere 1.6
2420 Male, age 75, left hemisphere 1.6
2236 Female, age 91, left hemisphere 1.4
2680 Female, age 94, right hemisphere 1.2
Area parastriata, superior
nTPM: 1.3
2419 Male, age 75, right hemisphere 1.7
1773 Female, age 91, left hemisphere 1.5
2435 Male, age 61, left hemisphere 1.3
2604 Female, age 94, right hemisphere 1.2
2684 Female, age 67, left hemisphere 1.1
2881 Male, age 76, left hemisphere 0.9
Area parastriata, temporal
nTPM: 1.4
2424 Female, age 67, left hemisphere 1.6
2681 Female, age 94, right hemisphere 1.6
2267 Male, age 61, right hemisphere 1.5
2471 Male, age 75, left hemisphere 1.3
1804 Male, age 76, right hemisphere 1.2
Area striata
nTPM: 1.4
2002 Female, age 91, right hemisphere 2.3
1884 Male, age 76, left hemisphere 1.9
2679 Female, age 94, right hemisphere 1.3
2427 Female, age 91, left hemisphere 1.2
2417 Male, age 61, right hemisphere 1.1
1753 Female, age 72, right hemisphere 0.4
Claustrum
nTPM: 2.6
2292 Female, age 85, both hemispheres 4.1
1956 Male, age 74, unknown 3.3
2284 Female, age 91, both hemispheres 3.1
2568 Male, age 61, both hemispheres 3.0
2198 Male, age 80, both hemispheres 2.3
2392 Female, age 94, both hemispheres 2.1
2645 Female, age 72, unknown 2.1
2196 Female, age 79, unknown 1.9
2491 Male, age 75, both hemispheres 1.9
Frontal eye field
nTPM: 1.5
2147 Male, age 61, left hemisphere 1.8
2761 Female, age 94, left hemisphere 1.7
2441 Male, age 75, left hemisphere 1.5
2543 Male, age 74, left hemisphere 1.0
Frontal operculum
nTPM: 1.7
2030 Male, age 61, right hemisphere 2.3
2781 Female, age 85, right hemisphere 1.7
2348 Male, age 75, left hemisphere 1.1
Fusiform gyrus
nTPM: 1.6
2431 Male, age 75, right hemisphere 3.0
2617 Female, age 94, left hemisphere 2.2
1807 Male, age 76, left hemisphere 2.0
2433 Female, age 72, left hemisphere 1.5
2112 Male, age 80, both hemispheres 0.9
2784 Female, age 85, left hemisphere 0.8
2074 Female, age 91, left hemisphere 0.7
Inferior frontal gyrus, opercular
nTPM: 2.0
2874 Female, age 85, right hemisphere 3.8
2873 Female, age 85, left hemisphere 2.2
2875 Female, age 67, left hemisphere 2.1
2865 Male, age 61, left hemisphere 2.0
2869 Male, age 74, left hemisphere 2.0
2871 Female, age 94, left hemisphere 2.0
2872 Female, age 94, right hemisphere 1.8
2868 Male, age 75, right hemisphere 1.6
2867 Male, age 75, left hemisphere 1.5
2866 Male, age 61, right hemisphere 1.3
Inferior parietal lobule
nTPM: 1.6
2876 Male, age 76, right hemisphere 2.3
2599 Female, age 94, left hemisphere 1.6
2418 Male, age 75, left hemisphere 1.4
2606 Female, age 67, right hemisphere 1.2
Inferior temporal gyrus
nTPM: 1.7
1808 Male, age 76, left hemisphere 2.3
2689 Female, age 94, right hemisphere 2.3
2430 Male, age 75, right hemisphere 1.9
1965 Female, age 91, left hemisphere 1.7
1880 Male, age 80, right hemisphere 1.3
1970 Female, age 85, right hemisphere 0.6
Intraparietal deep sulcus
nTPM: 2.0
2102 Female, age 91, left hemisphere 3.7
2607 Female, age 67, right hemisphere 2.5
2600 Female, age 94, right hemisphere 1.9
2669 Male, age 75, left hemisphere 1.4
2230 Male, age 61, right hemisphere 1.2
2798 Male, age 76, left hemisphere 1.1
Lingual gyrus
nTPM: 1.7
2618 Female, age 94, left hemisphere 2.1
2688 Male, age 75, right hemisphere 1.9
1893 Male, age 76, left hemisphere 1.8
2838 Male, age 80, right hemisphere 1.4
2073 Female, age 85, left hemisphere 1.2
Middle cingulate cortex
nTPM: 1.7
2539 Male, age 75, left hemisphere 2.5
2640 Female, age 94, right hemisphere 1.7
2357 Female, age 67, right hemisphere 1.5
2633 Male, age 74, left hemisphere 1.5
2028 Female, age 85, left hemisphere 1.2
Middle temporal gyrus
nTPM: 1.6
1819 Male, age 80, right hemisphere 2.1
1799 Male, age 76, left hemisphere 1.9
2616 Female, age 94, left hemisphere 1.9
2611 Male, age 75, right hemisphere 1.2
2034 Female, age 91, right hemisphere 1.1
Occipital cortex
nTPM: 1.3
2677 Female, age 67, right hemisphere 1.9
2608 Female, age 67, both hemispheres 1.7
2470 Male, age 75, right hemisphere 1.2
1842 Male, age 76, right hemisphere 1.0
2426 Male, age 75, midline 0.6
Olfactory area
nTPM: 1.8
2352 Female, age 94, right hemisphere 3.0
2440 Male, age 75, left hemisphere 2.3
2542 Male, age 74, left hemisphere 1.8
2222 Female, age 67, right hemisphere 1.4
2756 Female, age 67, right hemisphere 1.3
1805 Female, age 85, right hemisphere 1.2
Olfactory tubercle
nTPM: 1.6
2487 Female, age 94, left hemisphere 2.3
2856 Male, age 75, right hemisphere 1.7
1998 Female, age 91, both hemispheres 1.4
1846 Male, age 80, right hemisphere 1.2
Orbitofrontal gyrus, anterior
nTPM: 3.0
2862 Female, age 85, left hemisphere 4.7
2864 Female, age 67, left hemisphere 3.7
2863 Female, age 85, right hemisphere 0.5
Paracentral lobule, anterior
nTPM: 1.6
2474 Male, age 74, left hemisphere 2.0
2340 Female, age 67, right hemisphere 1.8
1926 Male, age 61, left hemisphere 1.7
2638 Female, age 94, right hemisphere 1.7
1754 Male, age 75, left hemisphere 1.3
1776 Female, age 85, right hemisphere 1.0
Paracentral lobule, posterior
nTPM: 1.6
1764 Male, age 74, right hemisphere 2.3
2446 Male, age 75, left hemisphere 2.0
2551 Female, age 94, right hemisphere 1.5
2345 Male, age 61, left hemisphere 1.1
1775 Female, age 85, right hemisphere 1.0
Parietal operculum
nTPM: 1.6
2356 Female, age 67, right hemisphere 2.3
2552 Female, age 94, right hemisphere 1.5
2719 Male, age 75, left hemisphere 1.3
1763 Male, age 74, left hemisphere 1.2
Parieto-insular cortex
nTPM: 1.8
1976 Female, age 91, right hemisphere 2.3
2671 Male, age 75, left hemisphere 2.3
2508 Female, age 94, right hemisphere 2.1
2232 Male, age 61, right hemisphere 1.3
2831 Male, age 76, right hemisphere 0.7
Parieto-occipital transitional area
nTPM: 1.7
2683 Female, age 67, left hemisphere 2.3
2270 Male, age 61, right hemisphere 2.1
1784 Male, age 76, right hemisphere 1.5
2674 Female, age 94, right hemisphere 1.5
2468 Male, age 75, left hemisphere 1.2
Piriform cortex
nTPM: 3.3
2153 Female, age 85, left hemisphere 4.4
2347 Male, age 75, right hemisphere 2.2
Postcentral gyrus
nTPM: 1.0
2533 Male, age 75, right hemisphere 1.0
Postcentral gyrus, dorsal
nTPM: 1.6
2339 Female, age 67, right hemisphere 2.6
2350 Male, age 75, left hemisphere 1.6
2477 Female, age 94, right hemisphere 1.6
2151 Male, age 61, left hemisphere 1.3
2544 Male, age 74, left hemisphere 1.3
1836 Female, age 85, right hemisphere 0.9
Postcentral gyrus, middle
nTPM: 1.4
2545 Male, age 74, left hemisphere 1.6
2248 Male, age 61, left hemisphere 1.4
2444 Male, age 75, left hemisphere 1.4
1897 Female, age 85, right hemisphere 1.3
2146 Female, age 67, right hemisphere 1.1
Postcentral gyrus, ventral
nTPM: 2.1
2024 Female, age 85, right hemisphere 2.9
2836 Female, age 94, right hemisphere 1.9
2445 Male, age 75, left hemisphere 1.5
Posterior cingulate cortex
nTPM: 1.6
1759 Male, age 74, right hemisphere 2.0
2553 Female, age 94, right hemisphere 2.0
2473 Male, age 75, left hemisphere 0.9
Posterior cingulate cortex, dorsal
nTPM: 2.1
2556 Female, age 67, right hemisphere 3.1
2634 Male, age 74, left hemisphere 2.9
2343 Male, age 61, left hemisphere 2.1
2540 Male, age 75, right hemisphere 1.6
2641 Female, age 94, right hemisphere 1.5
2076 Female, age 85, right hemisphere 1.4
Posterior cingulate cortex, ventral
nTPM: 1.6
2541 Male, age 75, right hemisphere 2.2
2448 Female, age 67, right hemisphere 2.0
1762 Female, age 94, right hemisphere 1.6
2635 Male, age 74, left hemisphere 1.6
2346 Male, age 61, left hemisphere 1.4
1994 Female, age 85, right hemisphere 0.6
Posterior insular cortex
nTPM: 1.4
2597 Male, age 75, left hemisphere 2.0
2603 Female, age 94, left hemisphere 1.9
2231 Male, age 61, left hemisphere 1.4
2511 Female, age 67, right hemisphere 1.3
1823 Male, age 76, right hemisphere 1.2
2832 Female, age 91, right hemisphere 0.9
Precentral gyrus
nTPM: 1.8
2557 Male, age 75, right hemisphere 1.8
Precentral gyrus, dorsal
nTPM: 1.7
2442 Male, age 75, left hemisphere 2.5
2476 Female, age 94, right hemisphere 1.9
1756 Male, age 74, left hemisphere 1.5
2354 Female, age 67, right hemisphere 1.0
Precentral gyrus, middle
nTPM: 1.5
2443 Male, age 75, left hemisphere 2.2
1969 Female, age 67, right hemisphere 1.5
2549 Female, age 94, right hemisphere 1.5
1909 Male, age 61, left hemisphere 1.3
2475 Male, age 74, right hemisphere 1.1
Precentral gyrus, ventral
nTPM: 1.5
2662 Female, age 67, right hemisphere 2.4
2550 Female, age 94, right hemisphere 1.4
2630 Male, age 75, left hemisphere 1.3
2678 Male, age 74, left hemisphere 1.2
Precuneus
nTPM: 1.7
2510 Female, age 67, right hemisphere 2.8
1780 Female, age 91, right hemisphere 1.7
2467 Male, age 75, right hemisphere 1.7
2594 Male, age 61, left hemisphere 1.6
1782 Male, age 76, right hemisphere 1.2
2673 Female, age 94, right hemisphere 1.2
Premotor cortex, dorsal
nTPM: 1.8
2554 Female, age 67, right hemisphere 2.8
2536 Male, age 75, left hemisphere 1.6
2631 Male, age 74, left hemisphere 1.6
2027 Male, age 61, left hemisphere 1.5
1878 Female, age 85, right hemisphere 1.3
Premotor cortex, ventral
nTPM: 1.8
1757 Male, age 74, left hemisphere 2.6
2349 Male, age 75, left hemisphere 2.3
1777 Female, age 67, left hemisphere 1.9
1779 Male, age 61, left hemisphere 1.6
1881 Female, age 85, right hemisphere 1.1
2637 Female, age 94, right hemisphere 1.1
Retrosplenial cortex
nTPM: 1.3
1914 Male, age 76, right hemisphere 1.7
2675 Female, age 94, left hemisphere 1.3
1951 Male, age 61, right hemisphere 1.0
Subcentral gyrus, S2
nTPM: 1.6
2351 Male, age 75, left hemisphere 2.3
2555 Female, age 67, right hemisphere 2.1
2762 Male, age 74, left hemisphere 1.6
2072 Male, age 61, left hemisphere 1.4
2839 Female, age 94, right hemisphere 1.2
1964 Female, age 85, right hemisphere 1.0
Superior parietal lobule
nTPM: 1.5
1800 Male, age 76, right hemisphere 1.6
1992 Female, age 91, right hemisphere 1.6
2605 Female, age 67, right hemisphere 1.5
2229 Male, age 61, right hemisphere 1.4
2672 Female, age 94, right hemisphere 1.3
Superior temporal gyrus
nTPM: 1.5
2615 Female, age 94, left hemisphere 1.7
2025 Male, age 80, right hemisphere 1.6
1843 Male, age 76, left hemisphere 1.5
2687 Male, age 75, right hemisphere 1.4
1844 Female, age 91, left hemisphere 1.1
Supplementary motor cortex
nTPM: 1.6
2632 Male, age 74, left hemisphere 3.3
2548 Female, age 94, right hemisphere 1.2
1993 Male, age 61, left hemisphere 1.1
2537 Male, age 75, left hemisphere 0.7
Supramarginal gyrus
nTPM: 1.2
1991 Female, age 91, right hemisphere 1.7
2601 Female, age 94, left hemisphere 1.5
2415 Male, age 61, left hemisphere 1.3
1798 Male, age 76, right hemisphere 0.9
2513 Female, age 72, left hemisphere 0.5
Temporal pole
nTPM: 1.9
2518 Male, age 75, right hemisphere 3.6
2612 Female, age 94, left hemisphere 1.9
1826 Male, age 76, right hemisphere 1.6
1832 Female, age 91, left hemisphere 1.2
1853 Female, age 85, right hemisphere 1.2
Temporo-insular cortex, parainsular gyrus
nTPM: 1.9
2264 Female, age 91, right hemisphere 3.0
2598 Male, age 75, left hemisphere 2.1
2676 Female, age 94, right hemisphere 1.9
2512 Female, age 67, right hemisphere 1.6
2416 Male, age 61, right hemisphere 1.5
1802 Male, age 76, left hemisphere 1.2
Temporo-occipital transitional zone
nTPM: 1.0
1793 Male, age 80, right hemisphere 1.6
1900 Male, age 76, left hemisphere 0.9
2251 Female, age 85, right hemisphere 0.5
Transversal temporal gyrus, anterior
nTPM: 1.4
2610 Male, age 75, right hemisphere 1.9
1809 Male, age 76, right hemisphere 1.5
1888 Female, age 91, left hemisphere 1.5
2522 Female, age 94, left hemisphere 1.2
1910 Male, age 80, right hemisphere 1.1
Transversal temporal gyrus, posterior
nTPM: 1.9
2520 Male, age 75, right hemisphere 4.0
2614 Female, age 94, left hemisphere 1.6
1967 Female, age 91, right hemisphere 1.4
1922 Male, age 76, left hemisphere 1.3
2833 Male, age 80, right hemisphere 1.3

CEREBRAL CORTEX - HPA PFC Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.4
Sample id Sample description nTPM
Anterior cingulate gyrus, pregenual-dorsal
nTPM: 0.2
1514 Male, age 74, right hemisphere 0.4
1516 Female, age 85, left hemisphere 0.3
1518 Female, age 67, right hemisphere 0.2
1511 Male, age 61, right hemisphere 0.1
1512 Male, age 75, left hemisphere 0.1
1513 Male, age 74, left hemisphere 0.1
1510 Male, age 61, left hemisphere 0.0
1515 Female, age 94, right hemisphere 0.0
1517 Female, age 67, left hemisphere 0.0
Anterior cingulate gyrus, pregenual-ventral
nTPM: 0.1
1521 Male, age 74, left hemisphere 0.3
1520 Male, age 75, right hemisphere 0.2
1523 Female, age 67, left hemisphere 0.1
1519 Male, age 61, left hemisphere 0.0
1522 Male, age 74, right hemisphere 0.0
Anterior cingulate gyrus, subgenual
nTPM: 0.2
1525 Male, age 75, left hemisphere 0.4
1530 Female, age 67, right hemisphere 0.4
1526 Male, age 75, right hemisphere 0.3
1524 Male, age 61, left hemisphere 0.2
1527 Male, age 74, left hemisphere 0.2
1529 Female, age 85, left hemisphere 0.2
1528 Male, age 74, right hemisphere 0.1
Dorsolateral prefrontal cortex
nTPM: 0.3
1445 Male, age 75, right hemisphere 0.8
1446 Male, age 74, right hemisphere 0.6
1449 Female, age 85, right hemisphere 0.5
1450 Female, age 67, right hemisphere 0.3
1444 Male, age 75, left hemisphere 0.1
1447 Female, age 94, left hemisphere 0.0
1448 Female, age 94, right hemisphere 0.0
Dorsomedial prefrontal cortex
nTPM: 0.1
1441 Male, age 75, left hemisphere 0.2
1440 Male, age 61, right hemisphere 0.1
1442 Male, age 75, right hemisphere 0.1
1443 Female, age 67, right hemisphere 0.1
1439 Male, age 61, left hemisphere 0.0
Frontal cortex
nTPM: 0.2
1574 Male, age 75, left hemisphere 0.3
1576 Male, age 74, left hemisphere 0.3
1580 Female, age 85, left hemisphere 0.3
1583 Female, age 67, right hemisphere 0.3
1572 Male, age 61, left hemisphere 0.2
1578 Female, age 94, left hemisphere 0.2
1581 Female, age 85, right hemisphere 0.2
1573 Male, age 61, right hemisphere 0.1
1575 Male, age 75, right hemisphere 0.1
1577 Male, age 74, right hemisphere 0.1
1579 Female, age 94, right hemisphere 0.0
1582 Female, age 67, left hemisphere 0.0
Frontomarginal cortex
nTPM: 0.3
1473 Female, age 67, right hemisphere 1.2
1467 Male, age 75, right hemisphere 0.6
1468 Male, age 74, left hemisphere 0.4
1469 Female, age 94, left hemisphere 0.2
1466 Male, age 61, right hemisphere 0.1
1471 Female, age 85, left hemisphere 0.1
1472 Female, age 67, left hemisphere 0.1
1465 Male, age 61, left hemisphere 0.0
1470 Female, age 94, right hemisphere 0.0
Frontopolar cortex
nTPM: 0.3
1460 Male, age 75, left hemisphere 0.7
1463 Female, age 67, left hemisphere 0.5
1464 Female, age 67, right hemisphere 0.4
1461 Male, age 75, right hemisphere 0.2
1462 Female, age 94, left hemisphere 0.1
1458 Male, age 61, left hemisphere 0.0
1459 Male, age 61, right hemisphere 0.0
Gyrus rectus
nTPM: 0.1
1476 Male, age 75, left hemisphere 0.5
1480 Female, age 85, left hemisphere 0.5
1474 Male, age 61, left hemisphere 0.1
1477 Male, age 75, right hemisphere 0.1
1481 Female, age 67, left hemisphere 0.1
1475 Male, age 61, right hemisphere 0.0
1478 Female, age 94, left hemisphere 0.0
1479 Female, age 94, right hemisphere 0.0
Inferior frontal gyrus, orbital
nTPM: 0.2
1503 Male, age 75, right hemisphere 0.5
1505 Male, age 74, right hemisphere 0.5
1502 Male, age 75, left hemisphere 0.4
1509 Female, age 67, right hemisphere 0.4
1504 Male, age 74, left hemisphere 0.1
1507 Female, age 85, left hemisphere 0.1
1508 Female, age 85, right hemisphere 0.1
1500 Male, age 61, left hemisphere 0.0
1501 Male, age 61, right hemisphere 0.0
1506 Female, age 94, left hemisphere 0.0
Inferior frontal gyrus, triangular
nTPM: 0.4
1547 Female, age 85, left hemisphere 1.7
1548 Female, age 85, right hemisphere 0.5
1544 Male, age 75, right hemisphere 0.4
1549 Female, age 67, left hemisphere 0.2
1545 Male, age 74, right hemisphere 0.1
1542 Male, age 61, left hemisphere 0.0
1543 Male, age 61, right hemisphere 0.0
1546 Female, age 94, right hemisphere 0.0
Orbitofrontal gyrus, lateral
nTPM: 0.2
1494 Male, age 75, left hemisphere 0.5
1499 Female, age 67, right hemisphere 0.5
1498 Female, age 85, right hemisphere 0.4
1496 Female, age 94, right hemisphere 0.1
1493 Male, age 61, right hemisphere 0.0
1495 Female, age 94, left hemisphere 0.0
1497 Female, age 85, left hemisphere 0.0
Orbitofrontal gyrus, medial
nTPM: 0.2
1491 Female, age 67, left hemisphere 0.8
1484 Male, age 75, right hemisphere 0.4
1489 Female, age 85, left hemisphere 0.4
1490 Female, age 85, right hemisphere 0.4
1482 Male, age 61, left hemisphere 0.2
1485 Male, age 74, left hemisphere 0.2
1483 Male, age 75, left hemisphere 0.1
1486 Male, age 74, right hemisphere 0.1
1492 Female, age 67, right hemisphere 0.1
1487 Female, age 94, left hemisphere 0.0
1488 Female, age 94, right hemisphere 0.0
Orbitofrontal gyrus, posterior
nTPM: 0.2
1534 Male, age 75, right hemisphere 0.7
1539 Female, age 85, right hemisphere 0.5
1533 Male, age 75, left hemisphere 0.4
1538 Female, age 85, left hemisphere 0.1
1531 Male, age 61, left hemisphere 0.0
1532 Male, age 61, right hemisphere 0.0
1535 Male, age 74, left hemisphere 0.0
1536 Female, age 94, left hemisphere 0.0
1537 Female, age 94, right hemisphere 0.0
1540 Female, age 67, left hemisphere 0.0
1541 Female, age 67, right hemisphere 0.0
Subcallosal gyrus
nTPM: 0.1
1557 Female, age 94, right hemisphere 0.3
1559 Female, age 85, right hemisphere 0.3
1561 Female, age 67, right hemisphere 0.3
1552 Male, age 75, left hemisphere 0.2
1553 Male, age 75, right hemisphere 0.1
1558 Female, age 85, left hemisphere 0.1
1550 Male, age 61, left hemisphere 0.0
1551 Male, age 61, right hemisphere 0.0
1554 Male, age 74, left hemisphere 0.0
1555 Male, age 74, right hemisphere 0.0
1556 Female, age 94, left hemisphere 0.0
1560 Female, age 67, left hemisphere 0.0
Superior frontal gyrus
nTPM: 0.1
1569 Female, age 85, left hemisphere 0.4
1570 Female, age 85, right hemisphere 0.4
1562 Male, age 61, left hemisphere 0.2
1564 Male, age 75, left hemisphere 0.2
1565 Male, age 75, right hemisphere 0.1
1566 Male, age 74, right hemisphere 0.1
1571 Female, age 67, right hemisphere 0.1
1563 Male, age 61, right hemisphere 0.0
1567 Female, age 94, left hemisphere 0.0
1568 Female, age 94, right hemisphere 0.0
Temporal cortex
nTPM: 0.2
1596 Female, age 85, right hemisphere 0.5
1592 Male, age 74, left hemisphere 0.3
1591 Male, age 75, right hemisphere 0.2
1593 Male, age 74, right hemisphere 0.2
1590 Male, age 61, right hemisphere 0.1
1594 Female, age 94, left hemisphere 0.0
1595 Female, age 94, right hemisphere 0.0
Ventrolateral prefrontal cortex
nTPM: 0.3
1451 Male, age 75, right hemisphere 0.9
1453 Male, age 74, right hemisphere 0.5
1455 Female, age 85, right hemisphere 0.5
1452 Male, age 74, left hemisphere 0.2
1457 Female, age 67, right hemisphere 0.2
1454 Female, age 94, left hemisphere 0.0
1456 Female, age 67, left hemisphere 0.0
Ventromedial prefrontal cortex
nTPM: 0.2
1437 Female, age 85, right hemisphere 0.5
1434 Male, age 75, right hemisphere 0.4
1436 Female, age 85, left hemisphere 0.2
1438 Female, age 67, left hemisphere 0.2
1432 Male, age 61, left hemisphere 0.0
1433 Male, age 61, right hemisphere 0.0
1435 Female, age 94, right hemisphere 0.0

CEREBRAL CORTEX - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Occipital cortex
Scaled Tags Per Million: 2.3
FF:10163-103B1 76 years, female 2.3
Postcentral gyrus
Scaled Tags Per Million: 0.8
FF:10032-101E5 44-52 years, mixed 0.8
Frontal lobe
Scaled Tags Per Million: 2.0
FF:10040-101F4 32-61 years, mixed 2.0
Insula
Scaled Tags Per Million: 1.0
FF:10039-101F3 20-68 years, mixed 1.0
Medial frontal gyrus
Scaled Tags Per Million: 1.7
FF:10150-102I6 76 years, female 1.7
Medial temporal gyrus
Scaled Tags Per Million: 1.5
FF:10156-103A3 76 years, female 2.4
FF:10183-103D3 60 years, female 0.6
Occipital lobe
Scaled Tags Per Million: 0.5
FF:10076-102A4 27 years, male 0.5
Occipital pole
Scaled Tags Per Million: 1.0
FF:10036-101E9 22-68 years, mixed 1.0
Paracentral gyrus
Scaled Tags Per Million: 0.5
FF:10035-101E8 22-69 years, mixed 0.5
Parietal lobe
Scaled Tags Per Million: 0.8
FF:10157-103A4 76 years, female 1.2
FF:10034-101E7 35-89 years, mixed 1.1
FF:10171-103B9 60 years, female 0.0
Temporal lobe
Scaled Tags Per Million: 1.4
FF:10031-101E4 32-61 years, mixed 1.4

CEREBRAL CORTEX - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.8
Pig sample Sample description nTPM
Occipital cortex
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.4
Sample A Female 0.5
Sample B Female 0.4
Sample C Male 0.5
Sample D Male 0.8
Retrosplenial cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.7
Sample A Female 0.7
Sample B Female 0.7
Sample C Male 0.9
Sample D Male 1.1
Cingulate cortex
nTPM: 0.7
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 0.7
Sample C Male 0.6
Sample D Male 0.9
Insular cortex
nTPM: 0.8
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 0.9
Sample C Male 0.8
Sample D Male 1.1
Motor cortex
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.5
Sample A Female 0.5
Sample B Female 0.6
Sample C Male 0.5
Sample D Male 0.8
Prefrontal cortex
nTPM: 0.6
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.4
Sample A Female 0.5
Sample B Female 0.4
Sample C Male 0.7
Sample D Male 0.9
Somatosensory cortex
nTPM: 0.6
Samples: 3

Max nTPM: 0.7
Min nTPM: 0.5
Sample B Female 0.7
Sample C Male 0.5
Sample D Male 0.5
Temporal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.6
Sample A Female 0.6
Sample B Female 0.6
Sample C Male 0.8
Sample D Male 0.9

CEREBRAL CORTEX - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Mouse sample Sample description nTPM
Occipital cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.1
Frontal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.1
Retrosplenial and cingulate cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.0
Somatosensory cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.1

CEREBRAL CORTEX - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Cerebral cortex
Expression energy: 0.4
69258298 Antisense, RP_050331_04_C06, Mouse strain C57BL/6J (56 days, male) 0.4

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