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SEC11C
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:99.7 nTPM
HPA Brain:79.4 nTPM
GTEx:99.7 nTPM
FANTOM5:295.8 Scaled Tags Per Million
Pig:93.1 nTPM
Mouse:109.6 nTPM
Allen mouse:4.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA026816
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 62.4
2481 Female, age 94, left hemisphere 87.7
1857 Female, age 85, left hemisphere 69.6
1854 Male, age 80, left hemisphere 67.9
2846 Female, age 79, unknown 61.8
2288 Male, age 75, left hemisphere 60.4
2290 Female, age 72, unknown 55.2
2289 Male, age 61, right hemisphere 52.8
1781 Male, age 74, unknown 43.9
Globus pallidus, externus
nTPM: 70.8
1996 Male, age 80, right hemisphere 106.7
2772 Female, age 79, unknown 89.2
2395 Male, age 75, both hemispheres 70.0
2646 Male, age 61, right hemisphere 56.9
2567 Female, age 72, unknown 31.3
Globus pallidus, internus
nTPM: 79.4
2037 Male, age 80, right hemisphere 93.7
2287 Male, age 75, right hemisphere 90.3
2483 Female, age 94, right hemisphere 86.7
2778 Female, age 91, both hemispheres 82.9
1818 Male, age 74, unknown 77.6
2111 Female, age 85, right hemisphere 69.3
2566 Female, age 72, unknown 55.6
Nucleus accumbens
nTPM: 63.6
2698 Female, age 72, unknown 82.1
2391 Female, age 94, left hemisphere 76.0
1856 Female, age 91, right hemisphere 72.1
2286 Male, age 75, left hemisphere 67.0
1806 Female, age 85, left hemisphere 62.7
2732 Male, age 80, right hemisphere 55.6
1783 Male, age 74, unknown 48.4
2824 Male, age 61, right hemisphere 44.6
Nucleus basalis of Meynert
nTPM: 58.8
2393 Male, age 80, right hemisphere 71.1
2569 Male, age 61, both hemispheres 58.8
2821 Male, age 75, both hemispheres 56.7
2484 Female, age 94, left hemisphere 48.4
Nucleus of the diagonal band
nTPM: 55.9
1812 Female, age 91, both hemispheres 75.9
2775 Male, age 80, right hemisphere 56.2
2195 Female, age 85, both hemispheres 54.9
1979 Male, age 74, unknown 49.6
2029 Male, age 61, right hemisphere 42.9
Putamen
nTPM: 51.9
2482 Female, age 94, left hemisphere 88.2
1937 Female, age 91, right hemisphere 53.5
1829 Male, age 74, unknown 51.0
1838 Male, age 80, right hemisphere 49.9
2466 Female, age 79, unknown 48.5
2489 Female, age 72, unknown 39.0
2647 Male, age 75, left hemisphere 32.9
Septal nuclei
nTPM: 57.0
2629 Female, age 94, right hemisphere 70.2
2199 Male, age 80, right hemisphere 63.5
2394 Male, age 61, left hemisphere 54.8
2009 Female, age 91, both hemispheres 53.7
2031 Female, age 72, unknown 53.6
1960 Male, age 74, unknown 52.4
2059 Female, age 85, both hemispheres 50.7
Stria terminalis, bed nucleus
nTPM: 48.5
2201 Male, age 74, unknown 56.8
1974 Female, age 91, both hemispheres 48.7
2486 Female, age 94, both hemispheres 40.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 95.7
Samples: 246

Max nTPM: 213.8
Min nTPM: 51.8
Std nTPM: 24.7
Median nTPM: 91.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 213.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 191.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 184.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 175.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 173.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 167.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 166.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 165.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 162.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 155.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 154.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 151.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 148.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 143.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 141.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 140.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 140.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 138.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 136.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 135.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 132.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 127.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 126.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 125.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 124.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 121.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 121.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 119.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 119.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 118.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 116.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 116.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 116.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 115.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 115.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 115.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 115.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 114.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 113.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 112.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 111.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 109.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 109.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 109.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 108.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 108.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 108.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 108.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 107.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 107.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 107.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 107.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 106.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 106.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 106.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 105.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 105.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 105.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 105.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 104.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 104.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 103.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 103.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 103.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 103.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 103.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 103.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 103.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 103.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 102.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 102.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 102.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 101.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 101.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 100.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 100.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 100.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 100.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 100.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 99.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 99.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 99.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 99.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 99.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 98.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 98.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 98.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 97.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 96.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 96.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 96.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 96.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 96.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 96.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 96.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 95.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 95.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 95.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 95.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 94.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 94.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 94.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 94.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 93.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 93.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 92.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 92.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 92.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 92.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 92.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 92.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 91.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 91.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 91.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 91.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 91.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 91.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 90.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 90.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 89.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 89.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 88.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 88.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 88.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 88.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 88.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 88.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 87.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 87.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 87.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 87.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 87.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 87.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 87.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 87.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 87.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 86.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 86.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 86.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 86.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 86.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 85.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 85.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 85.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 85.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 85.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 84.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 84.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 83.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 83.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 83.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 83.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 83.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 82.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 82.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 82.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 82.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 82.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 81.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 81.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 81.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 81.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 81.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 81.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 81.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 80.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 80.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 80.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 80.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 80.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 80.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 79.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 79.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 79.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 79.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 78.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 78.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 78.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 78.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 78.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 78.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 78.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 77.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 77.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 77.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 76.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 76.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 76.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 76.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 76.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 76.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 76.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 75.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 75.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 75.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 75.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 74.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 74.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 74.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 73.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 73.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 73.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 72.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 72.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 72.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 71.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 71.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 71.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 71.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 71.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 70.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 69.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 68.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 67.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 66.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 66.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 65.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 64.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 64.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 64.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 64.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 63.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 62.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 60.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 59.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 51.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 99.7
Samples: 246

Max nTPM: 195.9
Min nTPM: 50.4
Std nTPM: 24.9
Median nTPM: 95.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 195.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 190.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 181.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 169.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 167.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 165.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 165.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 162.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 159.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 158.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 158.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 153.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 151.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 148.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 147.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 145.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 144.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 142.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 142.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 141.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 139.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 136.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 134.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 134.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 133.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 133.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 133.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 129.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 124.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 124.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 124.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 124.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 122.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 121.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 121.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 121.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 120.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 119.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 119.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 118.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 117.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 116.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 116.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 115.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 115.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 115.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 115.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 114.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 114.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 114.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 114.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 114.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 114.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 112.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 112.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 112.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 112.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 112.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 112.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 111.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 111.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 111.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 110.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 110.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 110.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 109.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 109.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 108.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 108.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 108.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 108.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 107.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 107.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 106.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 106.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 106.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 105.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 105.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 105.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 105.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 105.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 105.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 105.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 104.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 104.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 104.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 104.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 103.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 103.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 103.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 103.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 102.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 102.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 102.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 102.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 101.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 101.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 101.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 101.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 101.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 100.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 100.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 100.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 100.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 100.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 99.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 99.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 99.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 99.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 98.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 97.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 97.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 97.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 97.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 96.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 96.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 96.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 96.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 96.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 96.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 95.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 95.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 95.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 95.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 95.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 95.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 95.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 95.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 94.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 94.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 94.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 94.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 94.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 94.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 93.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 93.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 93.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 93.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 93.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 93.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 92.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 92.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 92.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 91.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 91.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 91.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 90.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 90.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 90.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 90.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 89.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 89.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 88.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 88.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 88.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 88.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 88.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 88.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 87.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 87.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 87.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 87.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 87.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 87.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 86.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 86.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 86.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 86.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 86.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 86.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 86.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 86.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 85.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 85.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 85.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 85.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 85.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 85.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 85.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 84.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 84.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 84.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 83.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 83.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 83.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 83.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 83.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 83.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 82.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 82.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 82.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 81.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 81.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 81.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 81.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 80.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 80.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 80.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 80.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 80.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 79.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 78.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 78.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 78.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 78.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 77.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 77.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 77.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 77.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 77.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 76.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 76.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 75.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 75.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 74.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 74.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 73.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 73.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 72.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 72.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 72.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 71.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 70.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 70.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 69.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 69.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 69.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 69.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 68.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 67.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 67.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 66.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 66.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 65.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 64.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 64.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 63.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 61.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 60.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 60.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 58.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 56.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 56.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 55.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 50.4
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Brain - Putamen (basal ganglia)
Average nTPM: 96.7
Samples: 205

Max nTPM: 275.8
Min nTPM: 56.5
Std nTPM: 26.9
Median nTPM: 91.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 275.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 200.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 166.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 166.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 164.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 159.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 156.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 155.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 153.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 153.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 151.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 147.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 146.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 146.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 146.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 143.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 141.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 130.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 130.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 129.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 129.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 128.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 126.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 125.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 123.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 123.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 123.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 121.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 121.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 119.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 115.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 115.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 114.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 112.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 112.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 112.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 112.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 112.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 112.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 111.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 111.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 110.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 110.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 110.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 110.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 109.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 109.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 107.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 107.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 106.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 106.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 104.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 104.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 104.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 103.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 103.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 102.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 102.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 102.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 102.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 102.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 101.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 101.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 101.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 100.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 100.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 100.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 99.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 99.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 99.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 98.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 98.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 98.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 98.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 97.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 97.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 97.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 96.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 96.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 96.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 96.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 96.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 96.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 95.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 95.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 95.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 95.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 95.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 94.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 94.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 93.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 93.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 92.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 92.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 92.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 92.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 92.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 92.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 92.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 92.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 91.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 91.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 91.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 90.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 90.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 90.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 90.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 90.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 89.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 89.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 89.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 89.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 89.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 88.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 88.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 88.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 88.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 88.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 87.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 87.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 87.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 87.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 86.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 86.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 85.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 85.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 85.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 85.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 84.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 84.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 84.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 84.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 84.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 83.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 83.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 83.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 83.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 83.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 83.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 83.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 82.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 82.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 82.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 82.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 82.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 81.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 81.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 81.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 81.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 81.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 80.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 80.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 79.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 79.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 79.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 78.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 78.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 77.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 77.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 77.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 77.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 76.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 76.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 76.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 75.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 75.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 75.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 75.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 75.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 74.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 74.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 74.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 73.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 73.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 73.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 73.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 73.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 72.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 72.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 71.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 71.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 71.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 71.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 71.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 70.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 70.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 70.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 70.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 69.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 69.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 68.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 68.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 68.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 66.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 66.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 65.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 65.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 65.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 64.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 61.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 60.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 56.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 56.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

295.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 204.5
FF:10164-103B2 76 years, female 204.5
Nucleus accumbens
Scaled Tags Per Million: 159.9
FF:10037-101F1 23-56 years, mixed 159.9
Putamen
Scaled Tags Per Million: 202.7
FF:10176-103C5 60 years, female 202.7
Globus pallidus
Scaled Tags Per Million: 295.8
FF:10175-103C4 60 years, female 340.5
FF:10161-103A8 76 years, female 251.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.1
Pig sample Sample description nTPM
Caudate
nTPM: 61.9
Samples: 4

Max nTPM: 73.6
Min nTPM: 56.3
Sample A Female 59.6
Sample B Female 56.3
Sample C Male 73.6
Sample D Male 58.0
Putamen
nTPM: 93.1
Samples: 4

Max nTPM: 118.8
Min nTPM: 65.0
Sample A Female 98.1
Sample B Female 65.0
Sample C Male 118.8
Sample D Male 90.6
Septum
nTPM: 75.8
Samples: 4

Max nTPM: 91.4
Min nTPM: 66.5
Sample A Female 69.3
Sample B Female 66.5
Sample C Male 91.4
Sample D Male 75.9
Ventral pallidum
nTPM: 68.7
Samples: 4

Max nTPM: 77.7
Min nTPM: 56.3
Sample A Female 56.3
Sample B Female 70.6
Sample C Male 77.7
Sample D Male 70.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 96.3
Samples: 4

Max nTPM: 112.6
Min nTPM: 78.0
Sample A Male 101.6
Sample B Male 112.6
Sample C Female 78.0
Sample D Female 93.1
Septum
nTPM: 109.6
Samples: 4

Max nTPM: 120.8
Min nTPM: 99.0
Sample A Male 99.0
Sample B Male 117.4
Sample C Female 120.8
Sample D Female 101.3
Ventral forebrain
nTPM: 95.7
Samples: 4

Max nTPM: 103.9
Min nTPM: 87.4
Sample A Male 99.5
Sample B Male 91.9
Sample C Female 103.9
Sample D Female 87.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.2
385777 Antisense, RP_040625_01_E05, Mouse strain C57BL/6J (56 days, male) 3.2
Pallidum
Expression energy: 4.4
385777 Antisense, RP_040625_01_E05, Mouse strain C57BL/6J (56 days, male) 4.4

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