We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
502.5
nTPM
FANTOM5:
1091.0
Scaled Tags Per Million
Pig:
348.1
nTPM
Allen mouse:
1.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
502.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 428.4
2090
Male, age 80, both hemispheres
567.5
2188
Female, age 91, both hemispheres
474.7
2301
Female, age 85, both hemispheres
425.6
1984
Male, age 76, both hemispheres
245.8
Dorsal cochlear nucleus nTPM: 445.9
2378
Male, age 80, both hemispheres
551.6
2802
Male, age 74, right hemisphere
500.2
2187
Female, age 91, both hemispheres
432.3
2370
Male, age 61, both hemispheres
415.7
2058
Male, age 76, both hemispheres
329.8
Dorsal tegmental nucleus nTPM: 421.8
2358
Male, age 61, both hemispheres
624.1
2326
Male, age 74, both hemispheres
456.7
1936
Male, age 76, left hemisphere
317.0
2083
Male, age 80, both hemispheres
289.5
Dorsolateral tegmental area nTPM: 500.0
2337
Male, age 61, both hemispheres
1039.2
2360
Male, age 74, both hemispheres
435.2
2654
Male, age 80, both hemispheres
405.5
2751
Female, age 85, both hemispheres
376.4
2141
Male, age 76, both hemispheres
243.7
Kolliker-Fuse nucleus nTPM: 432.7
2163
Male, age 80, both hemispheres
458.9
2315
Male, age 76, right hemisphere
454.8
2793
Female, age 91, left hemisphere
384.3
Lateral lemniscal nuclei nTPM: 316.8
2746
Female, age 85, left hemisphere
388.8
2453
Male, age 74, right hemisphere
326.9
2036
Male, age 80, both hemispheres
317.0
2320
Female, age 91, left hemisphere
311.5
2169
Male, age 76, both hemispheres
240.0
Lateral parabrachial nucleus nTPM: 456.3
2013
Male, age 80, both hemispheres
597.3
2792
Male, age 76, both hemispheres
517.2
2790
Male, age 61, both hemispheres
361.4
2139
Female, age 85, right hemisphere
349.5
Lateral vestibular nucleus nTPM: 374.3
2311
Male, age 80, both hemispheres
484.9
2184
Male, age 76, both hemispheres
263.8
Locus coeruleus nTPM: 302.8
2123
Female, age 91, both hemispheres
339.2
2162
Male, age 80, both hemispheres
338.6
2720
Male, age 74, both hemispheres
333.6
2317
Female, age 72, unknown
318.8
2788
Male, age 74, unknown
292.4
2014
Male, age 55, unknown
248.5
1980
Male, age 76, both hemispheres
248.2
Medial parabrachial nucleus nTPM: 363.2
2854
Male, age 80, both hemispheres
497.1
2170
Female, age 91, both hemispheres
428.5
2156
Male, age 61, both hemispheres
312.8
2786
Male, age 76, both hemispheres
304.7
2463
Female, age 85, right hemisphere
272.7
Medial periolivary nuclei nTPM: 373.6
2791
Male, age 74, right hemisphere
564.6
2081
Male, age 80, both hemispheres
441.5
2458
Female, age 91, both hemispheres
347.2
2063
Male, age 76, both hemispheres
290.6
2171
Female, age 85, both hemispheres
224.1
Motor facial nucleus nTPM: 356.4
2795
Female, age 91, both hemispheres
481.7
2365
Male, age 74, right hemisphere
444.0
2126
Male, age 61, both hemispheres
400.8
2697
Female, age 85, both hemispheres
326.2
2062
Male, age 76, both hemispheres
254.3
2327
Male, age 80, both hemispheres
231.1
Motor trigeminal nucleus nTPM: 346.4
2335
Male, age 61, both hemispheres
429.4
2560
Male, age 74, both hemispheres
374.1
2079
Male, age 80, both hemispheres
331.9
2321
Female, age 91, both hemispheres
313.6
2309
Male, age 76, both hemispheres
283.2
Nuclei of the trapezoid body nTPM: 279.8
1983
Male, age 76, both hemispheres
318.5
2166
Male, age 80, both hemispheres
289.3
2368
Female, age 91, both hemispheres
288.3
2159
Male, age 61, both hemispheres
278.9
2735
Female, age 85, both hemispheres
224.0
Nucleus raphe magnus nTPM: 315.4
2455
Male, age 74, both hemispheres
387.5
2459
Female, age 91, both hemispheres
376.1
2051
Male, age 76, both hemispheres
361.5
2328
Male, age 80, both hemispheres
296.9
2160
Male, age 61, both hemispheres
271.8
2172
Female, age 85, both hemispheres
198.4
Paramedian reticular nucleus nTPM: 371.6
2052
Male, age 76, both hemispheres
469.5
2313
Male, age 61, both hemispheres
375.4
2057
Male, age 80, both hemispheres
332.2
2050
Female, age 85, both hemispheres
309.3
Pedunculopontine tegmental nucleus nTPM: 502.5
2338
Male, age 61, both hemispheres
882.6
2334
Male, age 80, both hemispheres
383.9
1921
Female, age 85, both hemispheres
241.0
Pontine nuclei nTPM: 335.9
2319
Female, age 91, both hemispheres
463.1
2454
Male, age 74, left hemisphere
381.4
2115
Male, age 80, left hemisphere
375.5
2727
Male, age 61, right hemisphere
354.5
2109
Female, age 72, unknown
316.9
1863
Male, age 55, unknown
303.6
1968
Male, age 76, left hemisphere
258.0
2787
Female, age 85, both hemispheres
234.0
Pontine raphe nucleus nTPM: 270.1
2853
Male, age 76, midline
294.6
2122
Female, age 85, midline
245.7
Posteroventral cochlear nucleus nTPM: 478.0
2341
Male, age 80, both hemispheres
636.2
2135
Female, age 91, both hemispheres
560.2
2371
Male, age 61, both hemispheres
528.5
2070
Male, age 76, both hemispheres
336.5
2752
Female, age 85, both hemispheres
328.4
Principal sensory trigeminal nucleus nTPM: 310.5
2367
Female, age 91, left hemisphere
408.7
2008
Male, age 80, left hemisphere
306.3
2324
Male, age 76, both hemispheres
275.8
2158
Male, age 61, both hemispheres
251.0
Reticular pontine nucleus, caudal nTPM: 313.8
2457
Female, age 91, both hemispheres
399.7
2559
Male, age 74, both hemispheres
322.0
2092
Male, age 76, both hemispheres
305.4
2332
Male, age 80, right hemisphere
228.2
Reticular pontine nucleus, oral nTPM: 353.4
2361
Male, age 74, both hemispheres
410.6
1939
Male, age 80, both hemispheres
390.8
2366
Female, age 91, both hemispheres
348.2
2167
Male, age 76, both hemispheres
335.8
2012
Female, age 85, both hemispheres
281.6
Reticulotegmental nucleus nTPM: 332.2
2333
Male, age 80, both hemispheres
377.6
2322
Female, age 91, both hemispheres
368.7
2452
Male, age 74, both hemispheres
323.3
2325
Male, age 76, both hemispheres
259.2
Spinal trigeminal nucleus, oral nTPM: 380.3
2737
Female, age 85, both hemispheres
431.9
2164
Male, age 80, both hemispheres
403.8
1978
Male, age 76, both hemispheres
305.3
Subcoeruleus area nTPM: 340.7
2451
Male, age 74, both hemispheres
425.6
2369
Female, age 85, left hemisphere
425.1
1958
Male, age 80, both hemispheres
348.0
2323
Female, age 91, left hemisphere
276.1
2089
Male, age 76, left hemisphere
228.4
Superior olive nTPM: 329.7
2364
Male, age 74, right hemisphere
453.4
2020
Male, age 76, both hemispheres
336.4
2561
Female, age 91, both hemispheres
329.2
2329
Male, age 80, right hemisphere
275.0
1875
Female, age 85, both hemispheres
254.7
Ventral periolivary nuclei nTPM: 346.6
2794
Female, age 91, left hemisphere
450.0
2023
Male, age 76, both hemispheres
392.1
2165
Male, age 80, both hemispheres
294.0
2130
Female, age 85, both hemispheres
250.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 446.7
2359
Male, age 61, both hemispheres
815.7
2161
Male, age 80, both hemispheres
433.6
2840
Female, age 85, both hemispheres
428.3
2456
Female, age 91, both hemispheres
371.6
2449
Male, age 74, both hemispheres
333.6
1959
Male, age 76, both hemispheres
297.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
348.1
Pig sample
Sample description
nTPM
Pons nTPM: 348.2
Samples: 4
Max nTPM: 402.6
Min nTPM: 276.1
Sample A
Female
402.6
Sample B
Female
276.1
Sample C
Male
334.6
Sample D
Male
379.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
