PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:769.4 nTPM
FANTOM5:1649.6 Scaled Tags Per Million
Pig:390.1 nTPM
Mouse:293.5 nTPM
Allen mouse:1.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 769.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 428.4
2090 Male, age 80, both hemispheres 567.5
2188 Female, age 91, both hemispheres 474.7
2301 Female, age 85, both hemispheres 425.6
1984 Male, age 76, both hemispheres 245.8
Area postrema
nTPM: 502.8
2306 Male, age 80, both hemispheres 638.4
2799 Male, age 61, both hemispheres 542.4
2054 Male, age 76, both hemispheres 327.5
Dorsal cochlear nucleus
nTPM: 445.9
2378 Male, age 80, both hemispheres 551.6
2802 Male, age 74, right hemisphere 500.2
2187 Female, age 91, both hemispheres 432.3
2370 Male, age 61, both hemispheres 415.7
2058 Male, age 76, both hemispheres 329.8
Dorsal medullary reticular nucleus
nTPM: 334.5
2373 Male, age 61, both hemispheres 391.1
2040 Female, age 85, both hemispheres 325.0
2088 Male, age 76, both hemispheres 287.4
Dorsal motor vagal complex
nTPM: 481.7
2807 Female, age 85, both hemispheres 1032.2
2813 Female, age 72, unknown 577.4
2643 Male, age 74, both hemispheres 442.8
2797 Male, age 61, both hemispheres 427.3
2133 Female, age 91, both hemispheres 387.5
2185 Male, age 76, both hemispheres 346.9
2844 Male, age 55, unknown 323.3
2000 Male, age 74, unknown 316.1
Dorsal tegmental nucleus
nTPM: 421.8
2358 Male, age 61, both hemispheres 624.1
2326 Male, age 74, both hemispheres 456.7
1936 Male, age 76, left hemisphere 317.0
2083 Male, age 80, both hemispheres 289.5
Dorsolateral tegmental area
nTPM: 500.0
2337 Male, age 61, both hemispheres 1039.2
2360 Male, age 74, both hemispheres 435.2
2654 Male, age 80, both hemispheres 405.5
2751 Female, age 85, both hemispheres 376.4
2141 Male, age 76, both hemispheres 243.7
Gigantocellular reticular nuclei, medullary
nTPM: 390.8
2387 Female, age 91, both hemispheres 425.7
2314 Male, age 61, both hemispheres 406.5
2310 Male, age 80, both hemispheres 392.7
2022 Male, age 76, right hemisphere 389.7
2462 Male, age 74, both hemispheres 373.4
1876 Female, age 85, both hemispheres 356.9
Gigantocellular reticular nuclei, pars
nTPM: 305.6
2706 Male, age 80, both hemispheres 427.3
2330 Male, age 80, both hemispheres 367.6
2336 Male, age 61, both hemispheres 287.2
2084 Female, age 85, both hemispheres 250.3
2168 Male, age 76, both hemispheres 195.6
Inferior olive
nTPM: 473.1
2178 Male, age 61, both hemispheres 594.4
2379 Male, age 80, both hemispheres 570.7
2563 Male, age 74, both hemispheres 436.7
2628 Female, age 91, both hemispheres 405.5
2085 Female, age 85, both hemispheres 358.1
Kolliker-Fuse nucleus
nTPM: 432.7
2163 Male, age 80, both hemispheres 458.9
2315 Male, age 76, right hemisphere 454.8
2793 Female, age 91, left hemisphere 384.3
Lateral lemniscal nuclei
nTPM: 316.8
2746 Female, age 85, left hemisphere 388.8
2453 Male, age 74, right hemisphere 326.9
2036 Male, age 80, both hemispheres 317.0
2320 Female, age 91, left hemisphere 311.5
2169 Male, age 76, both hemispheres 240.0
Lateral medullary reticular nucleus
nTPM: 481.3
2305 Male, age 74, both hemispheres 601.6
2190 Female, age 85, both hemispheres 507.7
2852 Male, age 80, both hemispheres 507.0
2374 Male, age 61, both hemispheres 468.6
2804 Female, age 91, both hemispheres 455.5
2044 Male, age 76, both hemispheres 347.5
Lateral parabrachial nucleus
nTPM: 456.3
2013 Male, age 80, both hemispheres 597.3
2792 Male, age 76, both hemispheres 517.2
2790 Male, age 61, both hemispheres 361.4
2139 Female, age 85, right hemisphere 349.5
Lateral vestibular nucleus
nTPM: 374.3
2311 Male, age 80, both hemispheres 484.9
2184 Male, age 76, both hemispheres 263.8
Locus coeruleus
nTPM: 302.8
2123 Female, age 91, both hemispheres 339.2
2162 Male, age 80, both hemispheres 338.6
2720 Male, age 74, both hemispheres 333.6
2317 Female, age 72, unknown 318.8
2788 Male, age 74, unknown 292.4
2014 Male, age 55, unknown 248.5
1980 Male, age 76, both hemispheres 248.2
Medial olivary nucleus
nTPM: 602.7
1943 Male, age 61, both hemispheres 856.6
2851 Male, age 80, both hemispheres 598.9
1962 Male, age 76, both hemispheres 490.8
2138 Female, age 91, both hemispheres 464.6
Medial parabrachial nucleus
nTPM: 363.2
2854 Male, age 80, both hemispheres 497.1
2170 Female, age 91, both hemispheres 428.5
2156 Male, age 61, both hemispheres 312.8
2786 Male, age 76, both hemispheres 304.7
2463 Female, age 85, right hemisphere 272.7
Medial periolivary nuclei
nTPM: 373.6
2791 Male, age 74, right hemisphere 564.6
2081 Male, age 80, both hemispheres 441.5
2458 Female, age 91, both hemispheres 347.2
2063 Male, age 76, both hemispheres 290.6
2171 Female, age 85, both hemispheres 224.1
Medial vestibular nucleus
nTPM: 360.0
2624 Male, age 61, both hemispheres 430.9
2801 Male, age 74, both hemispheres 407.8
2803 Female, age 91, both hemispheres 362.8
2093 Male, age 80, both hemispheres 359.4
2743 Female, age 85, both hemispheres 321.6
2134 Male, age 76, both hemispheres 277.4
Motor facial nucleus
nTPM: 356.4
2795 Female, age 91, both hemispheres 481.7
2365 Male, age 74, right hemisphere 444.0
2126 Male, age 61, both hemispheres 400.8
2697 Female, age 85, both hemispheres 326.2
2062 Male, age 76, both hemispheres 254.3
2327 Male, age 80, both hemispheres 231.1
Motor hypoglossal nucleus
nTPM: 377.1
2461 Male, age 61, both hemispheres 473.5
2182 Male, age 80, both hemispheres 431.3
2132 Female, age 85, both hemispheres 404.1
2125 Female, age 91, both hemispheres 305.7
2277 Male, age 76, both hemispheres 271.0
Motor trigeminal nucleus
nTPM: 346.4
2335 Male, age 61, both hemispheres 429.4
2560 Male, age 74, both hemispheres 374.1
2079 Male, age 80, both hemispheres 331.9
2321 Female, age 91, both hemispheres 313.6
2309 Male, age 76, both hemispheres 283.2
Nuclei of the trapezoid body
nTPM: 279.8
1983 Male, age 76, both hemispheres 318.5
2166 Male, age 80, both hemispheres 289.3
2368 Female, age 91, both hemispheres 288.3
2159 Male, age 61, both hemispheres 278.9
2735 Female, age 85, both hemispheres 224.0
Nucleus ambiguus
nTPM: 350.1
2071 Male, age 76, both hemispheres 478.4
2096 Female, age 85, both hemispheres 221.9
Nucleus cuneatus
nTPM: 579.8
2808 Female, age 85, both hemispheres 1110.2
2564 Male, age 74, both hemispheres 729.0
2376 Male, age 61, both hemispheres 707.8
2380 Male, age 80, both hemispheres 634.7
2381 Male, age 80, both hemispheres 582.0
2562 Male, age 61, both hemispheres 495.6
2805 Female, age 91, both hemispheres 447.9
2100 Male, age 76, both hemispheres 262.0
2131 Male, age 76, both hemispheres 249.2
Nucleus gracilis
nTPM: 769.4
2299 Female, age 85, both hemispheres 917.4
2627 Male, age 74, both hemispheres 729.7
2382 Male, age 80, both hemispheres 661.1
Nucleus raphe magnus
nTPM: 315.4
2455 Male, age 74, both hemispheres 387.5
2459 Female, age 91, both hemispheres 376.1
2051 Male, age 76, both hemispheres 361.5
2328 Male, age 80, both hemispheres 296.9
2160 Male, age 61, both hemispheres 271.8
2172 Female, age 85, both hemispheres 198.4
Nucleus raphe obscurus
nTPM: 483.7
2800 Male, age 61, midline 490.9
2845 Female, age 85, midline 483.7
2142 Male, age 76, midline 476.6
Nucleus raphe pallidus
nTPM: 677.4
1924 Male, age 61, midline 1113.3
2183 Male, age 80, midline 488.1
2145 Male, age 76, midline 430.7
Nucleus tractus solitarii
nTPM: 572.8
2191 Female, age 85, both hemispheres 961.8
2144 Female, age 91, right hemisphere 612.4
2307 Male, age 80, both hemispheres 392.3
2656 Male, age 76, both hemispheres 324.6
Paramedian reticular nucleus
nTPM: 371.6
2052 Male, age 76, both hemispheres 469.5
2313 Male, age 61, both hemispheres 375.4
2057 Male, age 80, both hemispheres 332.2
2050 Female, age 85, both hemispheres 309.3
Parvicellular reticular nuclei
nTPM: 336.4
2119 Male, age 80, both hemispheres 422.4
2095 Male, age 76, both hemispheres 319.3
2558 Male, age 74, both hemispheres 267.5
Parvicellular reticular nuclei, medullary
nTPM: 393.6
2091 Female, age 85, both hemispheres 538.2
2181 Male, age 80, left hemisphere 332.1
2189 Female, age 91, both hemispheres 310.4
Pedunculopontine tegmental nucleus
nTPM: 502.5
2338 Male, age 61, both hemispheres 882.6
2334 Male, age 80, both hemispheres 383.9
1921 Female, age 85, both hemispheres 241.0
Peritrigeminal nucleus
nTPM: 642.0
2067 Female, age 85, both hemispheres 1034.0
2179 Male, age 61, both hemispheres 497.3
2136 Male, age 76, both hemispheres 394.7
Pontine nuclei
nTPM: 335.9
2319 Female, age 91, both hemispheres 463.1
2454 Male, age 74, left hemisphere 381.4
2115 Male, age 80, left hemisphere 375.5
2727 Male, age 61, right hemisphere 354.5
2109 Female, age 72, unknown 316.9
1863 Male, age 55, unknown 303.6
1968 Male, age 76, left hemisphere 258.0
2787 Female, age 85, both hemispheres 234.0
Pontine raphe nucleus
nTPM: 270.1
2853 Male, age 76, midline 294.6
2122 Female, age 85, midline 245.7
Posteroventral cochlear nucleus
nTPM: 478.0
2341 Male, age 80, both hemispheres 636.2
2135 Female, age 91, both hemispheres 560.2
2371 Male, age 61, both hemispheres 528.5
2070 Male, age 76, both hemispheres 336.5
2752 Female, age 85, both hemispheres 328.4
Prepositus hypoglossal nucleus
nTPM: 419.5
2086 Male, age 80, both hemispheres 443.3
2855 Female, age 85, right hemisphere 395.8
Principal sensory trigeminal nucleus
nTPM: 310.5
2367 Female, age 91, left hemisphere 408.7
2008 Male, age 80, left hemisphere 306.3
2324 Male, age 76, both hemispheres 275.8
2158 Male, age 61, both hemispheres 251.0
Reticular pontine nucleus, caudal
nTPM: 313.8
2457 Female, age 91, both hemispheres 399.7
2559 Male, age 74, both hemispheres 322.0
2092 Male, age 76, both hemispheres 305.4
2332 Male, age 80, right hemisphere 228.2
Reticular pontine nucleus, oral
nTPM: 353.4
2361 Male, age 74, both hemispheres 410.6
1939 Male, age 80, both hemispheres 390.8
2366 Female, age 91, both hemispheres 348.2
2167 Male, age 76, both hemispheres 335.8
2012 Female, age 85, both hemispheres 281.6
Reticulotegmental nucleus
nTPM: 332.2
2333 Male, age 80, both hemispheres 377.6
2322 Female, age 91, both hemispheres 368.7
2452 Male, age 74, both hemispheres 323.3
2325 Male, age 76, both hemispheres 259.2
Spinal trigeminal nucleus, caudal
nTPM: 531.4
2312 Male, age 61, both hemispheres 897.9
2642 Male, age 74, both hemispheres 560.3
2308 Male, age 80, both hemispheres 500.1
2390 Female, age 91, both hemispheres 374.3
2447 Male, age 76, both hemispheres 324.1
Spinal trigeminal nucleus, interpolar
nTPM: 539.7
2386 Female, age 85, both hemispheres 1049.5
2033 Male, age 80, both hemispheres 532.1
2625 Male, age 61, both hemispheres 454.2
2389 Female, age 91, both hemispheres 365.1
2066 Male, age 76, right hemisphere 297.4
Spinal trigeminal nucleus, oral
nTPM: 380.3
2737 Female, age 85, both hemispheres 431.9
2164 Male, age 80, both hemispheres 403.8
1978 Male, age 76, both hemispheres 305.3
Spinal vestibular nucleus
nTPM: 387.1
2796 Male, age 61, both hemispheres 477.1
2780 Male, age 80, both hemispheres 420.5
2384 Male, age 74, both hemispheres 401.0
2806 Female, age 85, both hemispheres 380.5
2748 Male, age 76, both hemispheres 357.3
2186 Female, age 91, both hemispheres 286.3
Subcoeruleus area
nTPM: 340.7
2451 Male, age 74, both hemispheres 425.6
2369 Female, age 85, left hemisphere 425.1
1958 Male, age 80, both hemispheres 348.0
2323 Female, age 91, left hemisphere 276.1
2089 Male, age 76, left hemisphere 228.4
Superior olive
nTPM: 329.7
2364 Male, age 74, right hemisphere 453.4
2020 Male, age 76, both hemispheres 336.4
2561 Female, age 91, both hemispheres 329.2
2329 Male, age 80, right hemisphere 275.0
1875 Female, age 85, both hemispheres 254.7
Superior vestibular nucleus
nTPM: 472.9
2383 Male, age 74, both hemispheres 617.8
2015 Male, age 80, both hemispheres 505.0
2061 Male, age 76, both hemispheres 295.9
Ventral medullary reticular nucleus
nTPM: 385.3
2372 Male, age 61, both hemispheres 479.5
2060 Male, age 76, both hemispheres 291.1
Ventral periolivary nuclei
nTPM: 346.6
2794 Female, age 91, left hemisphere 450.0
2023 Male, age 76, both hemispheres 392.1
2165 Male, age 80, both hemispheres 294.0
2130 Female, age 85, both hemispheres 250.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 538.4
2741 Female, age 85, both hemispheres 737.5
2118 Male, age 80, both hemispheres 593.7
2180 Male, age 61, both hemispheres 536.0
2302 Female, age 91, both hemispheres 458.0
1986 Male, age 76, both hemispheres 366.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 446.7
2359 Male, age 61, both hemispheres 815.7
2161 Male, age 80, both hemispheres 433.6
2840 Female, age 85, both hemispheres 428.3
2456 Female, age 91, both hemispheres 371.6
2449 Male, age 74, both hemispheres 333.6
1959 Male, age 76, both hemispheres 297.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1649.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1091.0
FF:10165-103B3 76 years, female 1383.5
FF:10182-103D2 60 years, female 798.4
Medulla oblongata
Scaled Tags Per Million: 1649.6
FF:10174-103C3 60 years, female 1959.2
FF:10038-101F2 18-64 years, mixed 1610.9
FF:10155-103A2 76 years, female 1378.9
Pons
Scaled Tags Per Million: 1019.2
FF:10033-101E6 18-54 years, mixed 1019.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 390.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 390.1
Samples: 4

Max nTPM: 578.2
Min nTPM: 280.3
Sample A Female 280.3
Sample B Female 338.0
Sample C Male 363.9
Sample D Male 578.2
Pons
nTPM: 348.2
Samples: 4

Max nTPM: 402.6
Min nTPM: 276.1
Sample A Female 402.6
Sample B Female 276.1
Sample C Male 334.6
Sample D Male 379.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 293.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 293.5
Samples: 4

Max nTPM: 324.4
Min nTPM: 272.7
Sample A Male 272.7
Sample B Male 287.2
Sample C Female 289.8
Sample D Female 324.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.3
70305443 Antisense, RP_050609_04_B12, Mouse strain C57BL/6J (56 days, male) 1.3
71924291 Antisense, RP_050609_04_B12, Mouse strain C57BL/6J (56 days, male) 0.8
Pons
Expression energy: 1.1
70305443 Antisense, RP_050609_04_B12, Mouse strain C57BL/6J (56 days, male) 1.1
71924291 Antisense, RP_050609_04_B12, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org