HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:42.2 nTPM
HPA Brain:79.3 nTPM
GTEx:42.2 nTPM
FANTOM5:200.2 Scaled Tags Per Million
Pig:48.2 nTPM
Mouse:67.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043015Antibody HPA049488
Glial cells MediumMedium
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 79.3
Sample id Sample description nTPM
Hippocampus
nTPM: 79.3
1898 Male, age 80, left hemisphere 87.8
1855 Male, age 76, left hemisphere 83.2
2529 Female, age 94, left hemisphere 82.7
1911 Female, age 85, right hemisphere 76.5
2148 Female, age 91, left hemisphere 75.7
2621 Female, age 67, right hemisphere 70.0
Dentate gyrus
nTPM: 70.1
2010 Male, age 76, both hemispheres 75.6
2530 Female, age 94, left hemisphere 75.1
2246 Female, age 85, both hemispheres 73.1
2528 Male, age 74, both hemispheres 72.7
1927 Female, age 91, both hemispheres 68.9
2531 Female, age 67, both hemispheres 55.1
Entorhinal gyrus
nTPM: 69.7
2117 Female, age 91, right hemisphere 83.1
1938 Female, age 85, left hemisphere 80.8
1787 Male, age 76, left hemisphere 74.4
2686 Male, age 75, right hemisphere 62.7
2764 Male, age 80, right hemisphere 58.9
2613 Female, age 94, left hemisphere 58.2
Hippocampus, CA1
nTPM: 72.5
1873 Female, age 85, both hemispheres 78.8
2749 Male, age 80, left hemisphere 71.5
2045 Male, age 76, both hemispheres 71.3
2082 Female, age 91, right hemisphere 71.3
2527 Male, age 74, both hemispheres 69.6
Hippocampus, CA2
nTPM: 71.5
1940 Female, age 85, left hemisphere 78.6
2113 Female, age 91, right hemisphere 74.0
1892 Male, age 76, both hemispheres 71.6
2249 Male, age 74, both hemispheres 71.5
1963 Male, age 80, left hemisphere 69.3
2437 Female, age 94, left hemisphere 64.2
Hippocampus, CA3
nTPM: 69.4
1891 Female, age 85, both hemispheres 76.0
2436 Male, age 74, both hemispheres 73.7
1867 Male, age 76, both hemispheres 72.7
2137 Male, age 80, left hemisphere 68.6
2861 Female, age 67, both hemispheres 67.9
2620 Female, age 94, left hemisphere 57.5
Parahippocampal cortex
nTPM: 73.0
2250 Female, age 67, right hemisphere 84.3
1933 Female, age 85, both hemispheres 78.3
1850 Male, age 80, both hemispheres 75.7
2245 Female, age 91, both hemispheres 75.2
2692 Male, age 74, both hemispheres 72.3
2018 Male, age 76, both hemispheres 71.5
1990 Female, age 91, right hemisphere 69.5
2622 Female, age 67, right hemisphere 69.3
2693 Female, age 94, both hemispheres 68.0
2532 Female, age 72, left hemisphere 65.6
Perirhinal gyrus
nTPM: 74.3
1847 Female, age 91, left hemisphere 77.4
1841 Female, age 85, right hemisphere 75.0
2848 Male, age 76, right hemisphere 75.0
1794 Male, age 80, right hemisphere 72.9
2521 Female, age 94, right hemisphere 71.4
Subiculum
nTPM: 75.5
2729 Female, age 91, right hemisphere 84.0
2438 Female, age 94, left hemisphere 83.9
2042 Male, age 76, both hemispheres 75.1
1901 Male, age 80, both hemispheres 72.0
1977 Female, age 85, both hemispheres 70.3
2619 Male, age 74, both hemispheres 67.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 42.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.2
Samples: 197

Max nTPM: 86.2
Min nTPM: 15.9
Std nTPM: 9.1
Median nTPM: 41.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 86.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 74.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 68.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 67.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 63.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 62.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 59.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 57.8
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 57.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 200.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.2
FF:10153-102I9 76 years, female 220.8
FF:10169-103B7 60 years, female 179.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 48.2
Pig sample Sample description nTPM
Subiculum
nTPM: 45.9
Samples: 4

Max nTPM: 48.9
Min nTPM: 43.5
Sample A Female 48.9
Sample B Female 47.1
Sample C Male 43.5
Sample D Male 44.2
Dorsal hippocampus
nTPM: 43.5
Samples: 4

Max nTPM: 49.5
Min nTPM: 37.3
Sample A Female 42.9
Sample B Female 44.3
Sample C Male 49.5
Sample D Male 37.3
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 51.8
Min nTPM: 45.1
Sample A Female 45.1
Sample B Female 50.6
Sample C Male 51.8
Sample D Male 45.2
Ventral hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 44.2
Min nTPM: 37.4
Sample A Female 39.9
Sample B Female 44.2
Sample C Male 38.8
Sample D Male 37.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 67.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.3
Samples: 4

Max nTPM: 71.8
Min nTPM: 62.7
Sample A Male 69.5
Sample B Male 65.0
Sample C Female 62.7
Sample D Female 71.8
Hippocampal formation
nTPM: 67.5
Samples: 4

Max nTPM: 73.5
Min nTPM: 61.3
Sample A Male 61.3
Sample B Male 72.7
Sample C Female 73.5
Sample D Female 62.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org