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MARF1
HPA
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  • MARF1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MARF1
Synonyms KIAA0430, LKAP, LMKB, PPP1R34
Gene descriptioni

Full gene name according to HGNC.

Meiosis regulator and mRNA stability factor 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p13.11
Chromosome location (bp) 15594387 - 15643154
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000166783 (version 109)
Entrez gene 9665
HGNC HGNC:29562
UniProt Q9Y4F3 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y4F3
GeneCards MARF1
Antibodypedia MARF1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Essential regulator of oogenesis required for female meiotic progression to repress transposable elements and preventing their mobilization, which is essential for the germline integrity. Probably acts via some RNA metabolic process, equivalent to the piRNA system in males, which mediates the repression of transposable elements during meiosis by forming complexes composed of RNAs and governs the methylation and subsequent repression of transposons. Also required to protect from DNA double-strand breaks (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

RNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Meiosis, Oogenesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a putative peroxisomal protein that appears to be conserved across Euteleostomi. In humans, it may be autoantigenic. [provided by RefSeq, Jul 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MARF1-201
ENSP00000379654
ENST00000396368
Q9Y4F3
[Direct mapping] Meiosis regulator and mRNA stability factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003674 [molecular_function]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0004540 [ribonuclease activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005777 [peroxisome]
GO:0005794 [Golgi apparatus]
GO:0006302 [double-strand break repair]
GO:0007143 [female meiotic nuclear division]
GO:0010468 [regulation of gene expression]
GO:0016020 [membrane]
GO:0030154 [cell differentiation]
GO:0035194 [post-transcriptional gene silencing by RNA]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048477 [oogenesis]
GO:0051321 [meiotic cell cycle]
GO:0090501 [RNA phosphodiester bond hydrolysis]
GO:1903231 [mRNA base-pairing translational repressor activity]
GO:1905762 [CCR4-NOT complex binding]
Show all
1742 aa
192.9 kDa
No 0
MARF1-202
ENSP00000439819
ENST00000540441
G8JLP4
[Direct mapping] Meiosis regulator and mRNA stability factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0004540 [ribonuclease activity]
GO:0005777 [peroxisome]
GO:0005794 [Golgi apparatus]
GO:0010468 [regulation of gene expression]
GO:0035194 [post-transcriptional gene silencing by RNA]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048477 [oogenesis]
GO:0051321 [meiotic cell cycle]
GO:0090501 [RNA phosphodiester bond hydrolysis]
GO:1903231 [mRNA base-pairing translational repressor activity]
Show all
1577 aa
175 kDa
No 0
MARF1-205
ENSP00000449376
ENST00000548025
Q9Y4F3
[Direct mapping] Meiosis regulator and mRNA stability factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003674 [molecular_function]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0004540 [ribonuclease activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005777 [peroxisome]
GO:0005794 [Golgi apparatus]
GO:0007143 [female meiotic nuclear division]
GO:0010468 [regulation of gene expression]
GO:0016020 [membrane]
GO:0030154 [cell differentiation]
GO:0035194 [post-transcriptional gene silencing by RNA]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048477 [oogenesis]
GO:0051321 [meiotic cell cycle]
GO:0090501 [RNA phosphodiester bond hydrolysis]
GO:1903231 [mRNA base-pairing translational repressor activity]
GO:1905762 [CCR4-NOT complex binding]
Show all
1739 aa
192.6 kDa
No 0
MARF1-207
ENSP00000448495
ENST00000549219
F8VRS5
[Direct mapping] Meiosis regulator and mRNA stability factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
164 aa
17.6 kDa
No 0
MARF1-211
ENSP00000450309
ENST00000551742
Q9Y4F3
[Direct mapping] Meiosis regulator and mRNA stability factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003674 [molecular_function]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0004540 [ribonuclease activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005777 [peroxisome]
GO:0005794 [Golgi apparatus]
GO:0007143 [female meiotic nuclear division]
GO:0010468 [regulation of gene expression]
GO:0016020 [membrane]
GO:0030154 [cell differentiation]
GO:0035194 [post-transcriptional gene silencing by RNA]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048477 [oogenesis]
GO:0051321 [meiotic cell cycle]
GO:0090501 [RNA phosphodiester bond hydrolysis]
GO:1903231 [mRNA base-pairing translational repressor activity]
GO:1905762 [CCR4-NOT complex binding]
Show all
1742 aa
192.8 kDa
No 0

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