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PCLAF
HPA
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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PCLAF
Synonyms KIAA0101, NS5ATP9, OEATC-1, p15(PAF), PAF15
Gene descriptioni

Full gene name according to HGNC.

PCNA clamp associated factor
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q22.31
Chromosome location (bp) 64364304 - 64387687
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000166803 (version 109)
Entrez gene 9768
HGNC HGNC:28961
UniProt Q15004 (UniProt - Evidence at protein level)
neXtProt NX_Q15004
GeneCards PCLAF
Antibodypedia PCLAF antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

PCNA-binding protein that acts as a regulator of DNA repair during DNA replication. Following DNA damage, the interaction with PCNA is disrupted, facilitating the interaction between monoubiquitinated PCNA and the translesion DNA synthesis DNA polymerase eta (POLH) at stalled replisomes, facilitating the bypass of replication-fork-blocking lesions. Also acts as a regulator of centrosome number.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA damage, DNA repair
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables chromatin binding activity. Involved in several processes, including cellular macromolecule biosynthetic process; centrosome cycle; and response to UV. Located in centrosome; nucleus; and perinuclear region of cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PCLAF-201
ENSP00000300035
ENST00000300035
Q15004
[Direct mapping] PCNA-associated factor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0006260 [DNA replication]
GO:0006281 [DNA repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007098 [centrosome cycle]
GO:0009411 [response to UV]
GO:0019985 [translesion synthesis]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051726 [regulation of cell cycle]
GO:0060090 [molecular adaptor activity]
Show all
111 aa
12 kDa
No 0
PCLAF-202
ENSP00000369608
ENST00000380258
Q15004
[Direct mapping] PCNA-associated factor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0006260 [DNA replication]
GO:0006281 [DNA repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007098 [centrosome cycle]
GO:0009411 [response to UV]
GO:0019985 [translesion synthesis]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051726 [regulation of cell cycle]
GO:0060090 [molecular adaptor activity]
Show all
65 aa
7.2 kDa
No 0
PCLAF-203
ENSP00000453527
ENST00000558008
H0YMA4
[Direct mapping] PCNA-associated factor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051726 [regulation of cell cycle]
Show all
115 aa
12.4 kDa
No 0
PCLAF-207
ENSP00000452975
ENST00000559519
H0YKX3
[Direct mapping] PCNA-associated factor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051726 [regulation of cell cycle]
Show all
84 aa
9.3 kDa
No 0

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