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PEX11A
HPA
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  • PEX11A
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PEX11A
Synonyms MGC119947, MGC138534, PEX11alpha, PMP28
Gene descriptioni

Full gene name according to HGNC.

Peroxisomal biogenesis factor 11 alpha
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q26.1
Chromosome location (bp) 89677764 - 89690783
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000166821 (version 109)
Entrez gene 8800
HGNC HGNC:8852
UniProt O75192 (UniProt - Evidence at protein level)
neXtProt NX_O75192
GeneCards PEX11A
Antibodypedia PEX11A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May be involved in peroxisomal proliferation and may regulate peroxisomes division 1. May mediate binding of coatomer proteins to the peroxisomal membrane (By similarity). Promotes membrane protrusion and elongation on the peroxisomal surface 2.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Peroxisome biogenesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is a member of the PEX11 family, which is composed of membrane elongation factors involved in regulation of peroxisome maintenance and proliferation. This gene product interacts with peroxisomal membrane protein 19 and may respond to outside stimuli to increase peroxisome abundance. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PEX11A-201
ENSP00000300056
ENST00000300056
O75192
[Direct mapping] Peroxisomal membrane protein 11A
Show all
B2R8C6
[Target identity:100%; Query identity:100%] Peroxisomal biogenesis factor 11A; cDNA FLJ10553 fis, clone NT2RP2002325, highly similar to Peroxisomal membrane protein 11A; cDNA, FLJ93834, Homo sapiens peroxisomal biogenesis factor 11A (PEX11A), mRNA
Show all
Metabolic proteins
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005779 [integral component of peroxisomal membrane]
GO:0007031 [peroxisome organization]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016557 [peroxisome membrane biogenesis]
GO:0016559 [peroxisome fission]
GO:0032991 [protein-containing complex]
GO:0042803 [protein homodimerization activity]
GO:0044375 [regulation of peroxisome size]
GO:0050873 [brown fat cell differentiation]
Show all
247 aa
28.4 kDa
No 3
PEX11A-203
ENSP00000453878
ENST00000559170
H0YN61
[Direct mapping] Peroxisomal membrane protein 11A
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
32 aa
3.8 kDa
No 0
PEX11A-204
ENSP00000453552
ENST00000561224
H0YMC7
[Direct mapping] Peroxisomal membrane protein 11A
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005779 [integral component of peroxisomal membrane]
GO:0016020 [membrane]
GO:0016559 [peroxisome fission]
Show all
64 aa
7.5 kDa
No 0
PEX11A-205
ENSP00000453492
ENST00000561257
O75192
[Direct mapping] Peroxisomal membrane protein 11A
Show all
Metabolic proteins
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005777 [peroxisome]
GO:0005778 [peroxisomal membrane]
GO:0005779 [integral component of peroxisomal membrane]
GO:0007031 [peroxisome organization]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016559 [peroxisome fission]
GO:0032991 [protein-containing complex]
GO:0042803 [protein homodimerization activity]
GO:0044375 [regulation of peroxisome size]
Show all
216 aa
24.9 kDa
No 1

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