HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:172.5 nTPM
HPA Brain:301.7 nTPM
GTEx:172.5 nTPM
FANTOM5:312.2 Scaled Tags Per Million
Pig:560.3 nTPM
Mouse:530.5 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007925Antibody HPA011212Antibody CAB003759Antibody CAB080290
Glial cells Not detectedMediumHighHigh
Neuronal cells HighHighHighHigh








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 301.7
Sample id Sample description nTPM
Hippocampus
nTPM: 223.4
1898 Male, age 80, left hemisphere 331.2
1855 Male, age 76, left hemisphere 263.1
2621 Female, age 67, right hemisphere 233.2
1911 Female, age 85, right hemisphere 193.8
2148 Female, age 91, left hemisphere 167.0
2529 Female, age 94, left hemisphere 151.9
Dentate gyrus
nTPM: 237.3
1927 Female, age 91, both hemispheres 317.5
2010 Male, age 76, both hemispheres 312.1
2530 Female, age 94, left hemisphere 219.6
2246 Female, age 85, both hemispheres 219.1
2528 Male, age 74, both hemispheres 194.1
2531 Female, age 67, both hemispheres 161.5
Entorhinal gyrus
nTPM: 218.2
1938 Female, age 85, left hemisphere 289.5
2764 Male, age 80, right hemisphere 254.5
2613 Female, age 94, left hemisphere 235.0
1787 Male, age 76, left hemisphere 227.8
2117 Female, age 91, right hemisphere 164.8
2686 Male, age 75, right hemisphere 137.9
Hippocampus, CA1
nTPM: 301.7
2749 Male, age 80, left hemisphere 577.8
1873 Female, age 85, both hemispheres 286.6
2045 Male, age 76, both hemispheres 236.8
2527 Male, age 74, both hemispheres 226.1
2082 Female, age 91, right hemisphere 181.2
Hippocampus, CA2
nTPM: 254.3
1892 Male, age 76, both hemispheres 377.2
1963 Male, age 80, left hemisphere 363.7
2249 Male, age 74, both hemispheres 235.5
1940 Female, age 85, left hemisphere 186.4
2437 Female, age 94, left hemisphere 181.6
2113 Female, age 91, right hemisphere 181.4
Hippocampus, CA3
nTPM: 247.3
2137 Male, age 80, left hemisphere 450.5
1867 Male, age 76, both hemispheres 279.8
2436 Male, age 74, both hemispheres 240.7
1891 Female, age 85, both hemispheres 183.7
2620 Female, age 94, left hemisphere 167.7
2861 Female, age 67, both hemispheres 161.3
Parahippocampal cortex
nTPM: 233.4
1850 Male, age 80, both hemispheres 296.2
2245 Female, age 91, both hemispheres 281.1
2250 Female, age 67, right hemisphere 275.0
1933 Female, age 85, both hemispheres 269.8
1990 Female, age 91, right hemisphere 247.5
2693 Female, age 94, both hemispheres 237.2
2532 Female, age 72, left hemisphere 230.2
2018 Male, age 76, both hemispheres 212.5
2622 Female, age 67, right hemisphere 147.7
2692 Male, age 74, both hemispheres 136.9
Perirhinal gyrus
nTPM: 300.9
1847 Female, age 91, left hemisphere 338.1
2521 Female, age 94, right hemisphere 303.3
1794 Male, age 80, right hemisphere 299.7
1841 Female, age 85, right hemisphere 291.2
2848 Male, age 76, right hemisphere 272.4
Subiculum
nTPM: 196.2
1901 Male, age 80, both hemispheres 257.5
1977 Female, age 85, both hemispheres 250.1
2042 Male, age 76, both hemispheres 197.2
2438 Female, age 94, left hemisphere 176.5
2729 Female, age 91, right hemisphere 149.2
2619 Male, age 74, both hemispheres 146.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 172.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 172.5
Samples: 197

Max nTPM: 422.8
Min nTPM: 46.8
Std nTPM: 72.1
Median nTPM: 161.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 422.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 360.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 338.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 335.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 319.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 316.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 313.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 312.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 310.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 307.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 307.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 312.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 312.2
FF:10169-103B7 60 years, female 392.5
FF:10153-102I9 76 years, female 231.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 560.3
Pig sample Sample description nTPM
Subiculum
nTPM: 490.2
Samples: 4

Max nTPM: 584.7
Min nTPM: 445.6
Sample A Female 584.7
Sample B Female 455.5
Sample C Male 475.1
Sample D Male 445.6
Dorsal hippocampus
nTPM: 560.3
Samples: 4

Max nTPM: 694.7
Min nTPM: 458.3
Sample A Female 694.7
Sample B Female 589.6
Sample C Male 498.4
Sample D Male 458.3
Entorhinal cortex
nTPM: 467.2
Samples: 4

Max nTPM: 490.8
Min nTPM: 440.2
Sample A Female 489.2
Sample B Female 440.2
Sample C Male 490.8
Sample D Male 448.5
Ventral hippocampus
nTPM: 498.9
Samples: 4

Max nTPM: 579.2
Min nTPM: 371.0
Sample A Female 528.9
Sample B Female 371.0
Sample C Male 516.4
Sample D Male 579.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 530.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 459.3
Samples: 4

Max nTPM: 488.6
Min nTPM: 416.7
Sample A Male 416.7
Sample B Male 454.1
Sample C Female 477.6
Sample D Female 488.6
Hippocampal formation
nTPM: 530.5
Samples: 4

Max nTPM: 568.0
Min nTPM: 489.1
Sample A Male 568.0
Sample B Male 529.4
Sample C Female 535.5
Sample D Female 489.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
70919836 Antisense, RP_050713_02_B06, Mouse strain C57BL/6J (56 days, male) 18.3
2738 Antisense, RP_Baylor_103195, Mouse strain C57BL/6J (56 days, male) 9.0
2737 Antisense, RP_Baylor_103195, Mouse strain C57BL/6J (56 days, male) 8.0

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