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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Medium
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Medium
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Medium
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Low
White matter cells - cytoplasm/membrane: Medium
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:40.6 nTPM
HPA Brain:34.8 nTPM
GTEx:40.6 nTPM
FANTOM5:48.4 Scaled Tags Per Million
Pig:19.7 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021178Antibody HPA021230Antibody HPA021799Antibody CAB015421
Bergmann glia - cytoplasm/membrane --Not detected-
Bergmann glia - nucleus --Not detected-
GLUC cells - cytoplasm/membrane --Medium-
GLUC cells - nucleus --Not detected-
Purkinje cells MediumMedium-Not detected
Purkinje cells - cytoplasm/membrane --Medium-
Purkinje cells - dendrites --Not detected-
Purkinje cells - nucleus --Not detected-
Cells in granular layer Not detectedNot detected-Not detected
Cells in molecular layer Not detectedMedium-Not detected
Granular cells - cytoplasm/membrane --Not detected-
Granular cells - nucleus --Not detected-
Molecular layer - neuropil --Not detected-
Molecular layer cells - cytoplasm/membrane --Medium-
Molecular layer cells - nucleus --Not detected-
Processes in granular layer --Not detected-
Processes in molecular layer --Not detected-
Processes in white matter --Not detected-
Synaptic glomeruli - capsule --Not detected-
Synaptic glomeruli - core --Low-
White matter cells - cytoplasm/membrane --Medium-
White matter cells - nucleus --Not detected-









CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.8
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 27.5
1768 Female, age 72, unknown 33.2
2101 Male, age 74, right hemisphere 31.0
1774 Male, age 80, left hemisphere 30.5
2055 Female, age 91, right hemisphere 26.8
2006 Male, age 61, right hemisphere 26.7
2003 Female, age 85, right hemisphere 25.7
1769 Male, age 76, right hemisphere 23.1
1788 Male, age 55, unknown 23.0
Cerebellar nuclei
nTPM: 34.8
2177 Female, age 85, both hemispheres 39.4
2783 Female, age 72, unknown 39.2
2882 Male, age 76, left hemisphere 36.5
1879 Male, age 55, unknown 35.1
1966 Female, age 91, left hemisphere 34.5
2175 Male, age 61, right hemisphere 34.0
1871 Male, age 74, unknown 31.8
2005 Male, age 80, left hemisphere 31.8
2318 Male, age 74, left hemisphere 31.3
Flocculonodular lobe
nTPM: 27.8
1771 Male, age 80, left hemisphere 30.6
2176 Female, age 91, right hemisphere 30.2
1765 Male, age 55, unknown 28.6
1767 Male, age 76, left hemisphere 28.4
1835 Female, age 85, right hemisphere 26.2
2004 Male, age 61, right hemisphere 25.6
1792 Male, age 74, unknown 25.0
Vermis
nTPM: 27.5
1778 Female, age 91, left hemisphere 29.3
2834 Male, age 80, left hemisphere 28.9
1928 Female, age 72, unknown 28.6
1766 Male, age 55, unknown 28.1
2460 Male, age 61, both hemispheres 27.7
1751 Male, age 74, right hemisphere 27.6
1770 Male, age 76, left hemisphere 26.8
1988 Female, age 85, left hemisphere 26.3
1825 Male, age 74, unknown 24.4

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.6
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 40.6
Samples: 215

Max nTPM: 60.8
Min nTPM: 28.3
Std nTPM: 4.7
Median nTPM: 40.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 60.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 53.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 52.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 52.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 49.7
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 49.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 49.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 49.0
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 48.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 48.9
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 47.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 47.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 47.6
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 47.6
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 47.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 47.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 47.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 47.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 47.0
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 46.9
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 46.7
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 46.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 46.6
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 46.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 46.5
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 46.3
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 46.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 45.9
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 45.8
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 45.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 45.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 45.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 45.3
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 45.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 45.3
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 45.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 45.2
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 45.2
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 44.9
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 44.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 44.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 44.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 44.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 44.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 44.1
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 44.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 43.9
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 43.9
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 43.9
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 43.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 43.8
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 43.8
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 43.7
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 43.4
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 43.4
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 43.3
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 43.2
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 43.2
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 43.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 43.1
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 42.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 42.9
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 42.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 42.8
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 42.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 42.7
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 42.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 42.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 42.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 42.5
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 42.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 42.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 42.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 42.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 42.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 42.1
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 42.1
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 41.9
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 41.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 41.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 41.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 41.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 41.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 41.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 41.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 41.5
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 41.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 41.3
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 41.3
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 41.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 41.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 41.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 41.2
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 41.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 41.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 41.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 41.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 40.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 40.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 40.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 40.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 40.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 40.6
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 40.6
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 40.5
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 40.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 40.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 40.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 40.4
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 40.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 40.4
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 40.4
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 40.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 40.3
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 40.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 40.2
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 40.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 40.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 40.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 40.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 40.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 40.0
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 39.9
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 39.9
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 39.9
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 39.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 39.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 39.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 39.6
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 39.6
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 39.5
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 39.4
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 39.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 39.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 39.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 39.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 39.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 39.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 39.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 38.9
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 38.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 38.9
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 38.9
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 38.9
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 38.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 38.6
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 38.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 38.6
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 38.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 38.4
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 38.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 38.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 37.9
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 37.8
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 37.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 37.7
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 37.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 37.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 37.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 37.5
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 37.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 37.3
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 37.3
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 37.1
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 37.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 37.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 37.1
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 37.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 37.1
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 36.6
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 36.5
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 36.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 36.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 36.4
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 36.2
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 36.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 36.1
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 36.1
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 36.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 35.9
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 35.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 35.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 35.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 35.7
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 35.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 35.7
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 35.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 35.5
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 35.5
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 35.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 35.3
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 35.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 35.1
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 34.9
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 34.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 34.9
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 34.9
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 34.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 34.1
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 34.1
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 34.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 33.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 33.1
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 33.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 32.7
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 32.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 32.2
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 32.0
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 31.7
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 31.5
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 31.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 31.3
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 31.1
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 30.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 28.3
Show allShow less
Brain - Cerebellum
Average nTPM: 38.4
Samples: 241

Max nTPM: 65.9
Min nTPM: 27.4
Std nTPM: 4.4
Median nTPM: 38.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 65.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 50.5
GTEX-1192X-3226-SM-5987D 50-59 years, male 49.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 48.7
GTEX-14ABY-3026-SM-664NE 50-59 years, male 48.4
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 48.4
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 47.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 47.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 47.4
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 47.2
GTEX-WL46-2826-SM-3LK81 50-59 years, male 46.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 46.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 46.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 45.5
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 44.8
GTEX-17EVP-2926-SM-793BU 40-49 years, male 44.6
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 44.6
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 44.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 44.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 44.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 44.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 43.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 43.6
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 43.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 43.5
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 43.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 43.4
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 43.4
GTEX-14E6D-2926-SM-664OP 50-59 years, male 43.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 43.2
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 42.9
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 42.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 42.7
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 42.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 42.5
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 42.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 42.5
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 42.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 42.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 42.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 42.2
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 42.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 42.0
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 42.0
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 41.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 41.7
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 41.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 41.6
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 41.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 41.4
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 41.3
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 41.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 41.3
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 41.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 41.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 41.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 41.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 41.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 41.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 41.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 40.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 40.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 40.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 40.7
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 40.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 40.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 40.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 40.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 40.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 40.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 40.3
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 40.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 40.2
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 40.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 40.1
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 40.0
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 39.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 39.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 39.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 39.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 39.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 39.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 39.7
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 39.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 39.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 39.7
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 39.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 39.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 39.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 39.5
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 39.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 39.4
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 39.4
GTEX-13112-2926-SM-5DUWT 50-59 years, male 39.3
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 39.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 39.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 39.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 39.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 39.0
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 39.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 38.7
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 38.6
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 38.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 38.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 38.6
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 38.5
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 38.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 38.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 38.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 38.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 38.4
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 38.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 38.4
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 38.3
GTEX-11NUK-3026-SM-5986K 50-59 years, male 38.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 38.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 38.2
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 38.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 38.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 38.1
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 38.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 38.0
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 37.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 37.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 37.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 37.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 37.8
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 37.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 37.8
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 37.8
GTEX-12126-0926-SM-5FQTW 20-29 years, male 37.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 37.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 37.7
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 37.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 37.6
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 37.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 37.6
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 37.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 37.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 37.4
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 37.3
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 37.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 37.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 37.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 37.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 37.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 37.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 37.1
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 37.0
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 37.0
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 36.9
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 36.9
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 36.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 36.8
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 36.7
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 36.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 36.7
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 36.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 36.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 36.6
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 36.6
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 36.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 36.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 36.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 36.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 36.4
GTEX-144GL-2926-SM-5O99F 50-59 years, male 36.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 36.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 36.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 36.2
GTEX-17HII-2926-SM-79OMK 50-59 years, male 36.2
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 36.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 36.2
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 36.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 36.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 36.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 36.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 36.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 35.9
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 35.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 35.9
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 35.8
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 35.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 35.6
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 35.6
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 35.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 35.4
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 35.4
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 35.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 35.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 35.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 35.2
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 35.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 35.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 35.0
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 35.0
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 34.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 34.8
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 34.8
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 34.8
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 34.7
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 34.6
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 34.6
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 34.2
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 34.2
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 34.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 34.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 34.0
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 34.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 34.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 33.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 33.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 33.5
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 33.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 33.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 33.3
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 33.0
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 32.9
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 32.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 32.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 32.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 32.5
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 32.2
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 32.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 31.9
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 31.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 31.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 31.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 31.5
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 31.5
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 31.3
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 31.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 31.1
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 31.1
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 30.9
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 30.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 30.5
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 30.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 29.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 29.1
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 27.4
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

48.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 48.4
FF:10166-103B4 76 years, female 59.7
FF:10083-102B2 22-68 years, mixed 37.2

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.7
Pig sample Sample description nTPM
Cerebellum
nTPM: 19.7
Samples: 4

Max nTPM: 27.5
Min nTPM: 15.9
Sample A Female 27.5
Sample B Female 18.6
Sample C Male 15.9
Sample D Male 16.8

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