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GPRC5B
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  • GPRC5B
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Neuronal projections: Not detected
Synapses: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:189.9 nTPM
FANTOM5:418.3 Scaled Tags Per Million
Pig:197.1 nTPM

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA015247
Glial cells Medium
Neuronal cells Not detected
Neuronal projections Not detected
Synapses Not detected

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA015247
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 189.9
Samples: 246

Max nTPM: 435.2
Min nTPM: 44.3
Std nTPM: 63.0
Median nTPM: 182.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 435.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 379.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 361.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 353.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 334.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 331.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 331.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 330.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 322.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 321.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 319.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 318.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 311.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 310.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 303.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 298.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 294.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 293.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 289.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 289.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 287.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 283.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 282.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 274.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 273.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 271.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 271.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 270.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 269.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 266.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 261.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 259.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 258.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 258.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 253.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 253.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 252.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 252.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 252.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 247.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 246.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 244.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 242.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 242.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 242.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 238.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 238.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 236.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 236.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 235.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 235.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 231.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 230.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 229.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 228.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 227.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 227.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 226.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 226.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 225.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 223.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 222.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 221.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 221.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 220.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 218.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 217.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 216.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 216.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 215.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 215.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 215.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 214.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 214.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 214.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 214.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 213.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 212.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 212.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 212.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 212.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 209.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 207.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 206.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 206.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 206.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 205.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 204.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 204.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 203.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 203.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 202.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 202.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 200.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 199.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 199.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 199.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 198.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 198.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 198.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 196.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 196.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 196.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 195.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 195.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 194.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 194.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 193.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 192.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 192.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 191.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 190.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 188.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 187.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 187.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 187.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 186.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 184.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 184.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 184.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 182.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 182.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 182.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 181.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 181.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 180.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 179.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 178.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 178.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 178.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 177.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 177.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 177.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 176.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 175.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 175.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 175.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 174.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 174.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 171.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 171.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 171.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 170.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 169.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 168.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 167.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 167.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 166.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 166.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 166.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 166.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 166.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 165.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 165.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 165.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 165.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 164.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 162.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 162.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 161.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 161.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 161.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 160.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 160.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 160.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 159.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 157.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 157.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 156.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 156.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 155.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 155.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 154.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 154.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 154.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 153.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 153.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 152.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 150.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 150.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 149.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 149.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 148.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 147.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 147.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 145.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 145.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 144.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 144.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 143.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 142.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 141.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 140.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 140.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 138.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 138.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 135.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 131.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 131.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 131.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 131.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 131.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 130.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 129.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 129.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 127.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 127.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 126.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 125.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 124.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 123.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 122.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 120.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 120.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 119.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 118.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 117.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 115.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 113.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 113.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 112.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 111.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 111.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 109.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 109.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 108.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 107.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 100.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 98.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 94.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 93.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 92.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 88.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 87.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 87.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 83.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 66.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 58.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 46.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 44.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

418.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 418.3
FF:10164-103B2 76 years, female 418.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.1
Pig sample Sample description nTPM
Caudate
nTPM: 197.1
Samples: 4

Max nTPM: 231.0
Min nTPM: 162.5
Sample A Female 162.5
Sample B Female 209.2
Sample C Male 231.0
Sample D Male 185.7

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