HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:25.9 nTPM
HPA Brain:30.2 nTPM
GTEx:25.9 nTPM
FANTOM5:75.7 Scaled Tags Per Million
Pig:23.4 nTPM
Mouse:89.8 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040697Antibody HPA059818Antibody CAB045978
Glial cells LowMediumLow
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 30.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
2529 Female, age 94, left hemisphere 32.5
1898 Male, age 80, left hemisphere 30.9
1911 Female, age 85, right hemisphere 28.7
1855 Male, age 76, left hemisphere 28.5
2148 Female, age 91, left hemisphere 25.7
2621 Female, age 67, right hemisphere 22.0
Dentate gyrus
nTPM: 26.5
2530 Female, age 94, left hemisphere 31.3
2528 Male, age 74, both hemispheres 29.9
1927 Female, age 91, both hemispheres 27.3
2246 Female, age 85, both hemispheres 25.4
2010 Male, age 76, both hemispheres 23.7
2531 Female, age 67, both hemispheres 21.4
Entorhinal gyrus
nTPM: 28.2
2117 Female, age 91, right hemisphere 33.3
1938 Female, age 85, left hemisphere 28.7
2764 Male, age 80, right hemisphere 28.2
2686 Male, age 75, right hemisphere 27.9
1787 Male, age 76, left hemisphere 26.2
2613 Female, age 94, left hemisphere 24.6
Hippocampus, CA1
nTPM: 27.6
2527 Male, age 74, both hemispheres 34.4
1873 Female, age 85, both hemispheres 28.6
2749 Male, age 80, left hemisphere 27.3
2082 Female, age 91, right hemisphere 25.1
2045 Male, age 76, both hemispheres 22.8
Hippocampus, CA2
nTPM: 29.8
1940 Female, age 85, left hemisphere 33.0
2113 Female, age 91, right hemisphere 31.8
1892 Male, age 76, both hemispheres 30.0
1963 Male, age 80, left hemisphere 30.0
2249 Male, age 74, both hemispheres 29.6
2437 Female, age 94, left hemisphere 24.3
Hippocampus, CA3
nTPM: 24.8
1891 Female, age 85, both hemispheres 29.6
2436 Male, age 74, both hemispheres 28.2
1867 Male, age 76, both hemispheres 24.4
2137 Male, age 80, left hemisphere 23.0
2861 Female, age 67, both hemispheres 22.3
2620 Female, age 94, left hemisphere 21.7
Parahippocampal cortex
nTPM: 30.0
1850 Male, age 80, both hemispheres 33.4
1990 Female, age 91, right hemisphere 32.9
2692 Male, age 74, both hemispheres 32.5
2693 Female, age 94, both hemispheres 31.9
1933 Female, age 85, both hemispheres 31.8
2532 Female, age 72, left hemisphere 30.2
2250 Female, age 67, right hemisphere 29.4
2245 Female, age 91, both hemispheres 27.9
2018 Male, age 76, both hemispheres 27.7
2622 Female, age 67, right hemisphere 21.9
Perirhinal gyrus
nTPM: 30.2
1841 Female, age 85, right hemisphere 33.2
1847 Female, age 91, left hemisphere 32.7
1794 Male, age 80, right hemisphere 30.2
2521 Female, age 94, right hemisphere 27.6
2848 Male, age 76, right hemisphere 27.5
Subiculum
nTPM: 29.2
2619 Male, age 74, both hemispheres 32.3
2438 Female, age 94, left hemisphere 30.6
2729 Female, age 91, right hemisphere 29.9
1901 Male, age 80, both hemispheres 29.6
1977 Female, age 85, both hemispheres 27.3
2042 Male, age 76, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 25.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.9
Samples: 197

Max nTPM: 47.0
Min nTPM: 12.5
Std nTPM: 5.2
Median nTPM: 25.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 47.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 43.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 42.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 37.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 36.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 36.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 35.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 35.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 34.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 34.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 75.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.7
FF:10169-103B7 60 years, female 79.9
FF:10153-102I9 76 years, female 71.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.4
Pig sample Sample description nTPM
Subiculum
nTPM: 21.8
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.9
Sample A Female 25.5
Sample B Female 21.6
Sample C Male 20.1
Sample D Male 19.9
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 28.5
Min nTPM: 17.6
Sample A Female 28.5
Sample B Female 21.6
Sample C Male 25.8
Sample D Male 17.6
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 24.9
Min nTPM: 18.9
Sample A Female 21.8
Sample B Female 24.9
Sample C Male 20.9
Sample D Male 18.9
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 19.9
Sample A Female 22.4
Sample B Female 19.9
Sample C Male 22.2
Sample D Male 23.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 89.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 84.3
Samples: 4

Max nTPM: 89.5
Min nTPM: 80.9
Sample A Male 83.8
Sample B Male 80.9
Sample C Female 89.5
Sample D Female 82.9
Hippocampal formation
nTPM: 89.9
Samples: 4

Max nTPM: 96.1
Min nTPM: 82.1
Sample A Male 96.1
Sample B Male 82.1
Sample C Female 90.0
Sample D Female 91.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69028557 Antisense, RP_050316_01_E09, Mouse strain C57BL/6J (56 days, male) 5.1

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