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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:55.4 nTPM
HPA Brain:102.8 nTPM
GTEx:55.4 nTPM
FANTOM5:290.0 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:53.3 nTPM
Allen mouse:1.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA061358
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 74.4
2288 Male, age 75, left hemisphere 105.9
2481 Female, age 94, left hemisphere 94.1
1781 Male, age 74, unknown 71.6
2289 Male, age 61, right hemisphere 70.6
2846 Female, age 79, unknown 67.8
2290 Female, age 72, unknown 67.7
1857 Female, age 85, left hemisphere 60.7
1854 Male, age 80, left hemisphere 56.5
Globus pallidus, externus
nTPM: 92.4
2772 Female, age 79, unknown 108.0
1996 Male, age 80, right hemisphere 104.2
2395 Male, age 75, both hemispheres 84.6
2646 Male, age 61, right hemisphere 84.6
2567 Female, age 72, unknown 80.7
Globus pallidus, internus
nTPM: 102.8
2287 Male, age 75, right hemisphere 129.5
2778 Female, age 91, both hemispheres 107.7
1818 Male, age 74, unknown 104.6
2111 Female, age 85, right hemisphere 100.5
2037 Male, age 80, right hemisphere 94.0
2566 Female, age 72, unknown 92.7
2483 Female, age 94, right hemisphere 90.6
Nucleus accumbens
nTPM: 75.2
2286 Male, age 75, left hemisphere 96.0
2391 Female, age 94, left hemisphere 92.1
2698 Female, age 72, unknown 76.6
1783 Male, age 74, unknown 72.1
1806 Female, age 85, left hemisphere 68.5
1856 Female, age 91, right hemisphere 68.1
2824 Male, age 61, right hemisphere 65.4
2732 Male, age 80, right hemisphere 63.0
Nucleus basalis of Meynert
nTPM: 64.0
2569 Male, age 61, both hemispheres 77.5
2821 Male, age 75, both hemispheres 66.5
2484 Female, age 94, left hemisphere 62.7
2393 Male, age 80, right hemisphere 49.3
Nucleus of the diagonal band
nTPM: 65.6
1812 Female, age 91, both hemispheres 69.4
2775 Male, age 80, right hemisphere 67.8
2195 Female, age 85, both hemispheres 66.2
2029 Male, age 61, right hemisphere 63.6
1979 Male, age 74, unknown 61.2
Putamen
nTPM: 66.3
2482 Female, age 94, left hemisphere 90.8
1829 Male, age 74, unknown 70.1
2647 Male, age 75, left hemisphere 67.8
1937 Female, age 91, right hemisphere 64.6
2466 Female, age 79, unknown 59.1
1838 Male, age 80, right hemisphere 56.3
2489 Female, age 72, unknown 55.1
Septal nuclei
nTPM: 62.6
1960 Male, age 74, unknown 72.1
2031 Female, age 72, unknown 66.7
2394 Male, age 61, left hemisphere 63.5
2059 Female, age 85, both hemispheres 63.2
2629 Female, age 94, right hemisphere 63.2
2009 Female, age 91, both hemispheres 55.5
2199 Male, age 80, right hemisphere 54.3
Stria terminalis, bed nucleus
nTPM: 65.7
1974 Female, age 91, both hemispheres 73.9
2201 Male, age 74, unknown 63.3
2486 Female, age 94, both hemispheres 59.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 50.4
Samples: 246

Max nTPM: 86.5
Min nTPM: 18.6
Std nTPM: 12.3
Median nTPM: 48.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 86.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 78.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 75.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 74.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 74.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 74.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 73.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 72.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 72.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 72.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 72.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 72.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 71.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 71.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 71.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 70.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 70.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 69.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 69.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 69.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 68.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 68.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 68.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 67.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 67.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 66.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 66.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 65.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 65.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 64.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 64.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 64.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 63.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 63.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 63.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 62.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 62.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 62.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 62.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 62.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 61.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 61.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 61.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 59.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 59.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 59.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 59.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 58.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 58.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 58.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 58.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 58.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 57.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 57.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 57.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 57.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 57.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 57.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 57.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 56.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 56.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 56.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 56.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 56.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 56.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 56.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 56.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 55.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 55.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 55.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 55.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 55.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 55.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 54.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 54.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 54.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 53.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 53.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 53.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 53.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 53.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 53.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 53.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 53.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 52.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 52.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 52.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 52.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 52.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 52.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 51.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 51.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 51.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 50.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 50.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 50.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 50.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 50.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 49.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 49.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 49.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 49.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 49.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 49.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 48.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 48.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 48.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 48.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 48.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 48.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 48.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 48.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 47.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 47.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 47.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 47.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 47.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 47.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 47.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 47.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 46.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 46.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 46.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 46.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 46.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 46.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 45.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 45.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 45.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 45.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 44.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 44.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 44.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 44.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 43.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 43.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 43.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 43.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 43.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 43.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 43.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 43.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 42.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 42.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 42.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 42.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 42.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 42.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 42.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 41.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 41.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 41.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 41.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 40.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 40.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 40.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 40.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 40.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 40.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 40.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 39.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 39.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 39.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 39.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 39.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 39.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 38.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 38.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 38.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 38.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 38.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 38.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 37.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 37.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 37.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 37.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 37.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 36.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 36.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 36.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 36.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 36.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 35.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 35.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 35.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 35.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 35.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 34.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 34.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 34.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 34.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 33.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 33.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 33.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 32.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 30.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 30.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 30.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 30.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 29.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 29.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 28.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 27.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 27.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 26.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 23.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 18.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 51.6
Samples: 246

Max nTPM: 98.3
Min nTPM: 14.5
Std nTPM: 13.7
Median nTPM: 49.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 98.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 92.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 89.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 89.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 81.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 80.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 80.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 79.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 78.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 77.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 76.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 75.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 75.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 74.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 74.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 73.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 72.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 72.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 71.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 70.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 70.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 70.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 70.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 70.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 69.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 69.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 69.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 69.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 69.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 69.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 68.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 68.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 67.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 67.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 66.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 66.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 66.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 66.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 66.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 66.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 64.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 64.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 64.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 63.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 63.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 63.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 63.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 63.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 63.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 63.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 62.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 62.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 62.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 62.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 62.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 61.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 61.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 61.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 61.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 61.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 60.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 60.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 60.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 59.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 59.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 59.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 58.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 58.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 58.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 58.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 58.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 58.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 58.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 58.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 58.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 57.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 57.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 57.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 57.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 56.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 56.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 56.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 56.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 56.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 56.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 55.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 55.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 55.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 55.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 55.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 54.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 54.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 54.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 54.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 54.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 53.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 53.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 53.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 53.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 53.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 53.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 53.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 53.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 52.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 52.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 51.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 51.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 51.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 51.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 51.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 51.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 51.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 50.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 50.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 49.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 49.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 49.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 49.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 49.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 49.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 48.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 48.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 48.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 48.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 48.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 48.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 48.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 48.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 48.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 48.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 47.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 47.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 47.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 47.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 47.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 47.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 47.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 47.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 47.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 46.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 46.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 46.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 46.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 46.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 45.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 45.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 45.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 45.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 45.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 45.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 45.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 45.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 45.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 45.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 44.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 44.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 44.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 44.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 44.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 44.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 44.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 44.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 44.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 44.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 43.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 43.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 43.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 43.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 43.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 43.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 42.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 42.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 42.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 42.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 42.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 41.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 41.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 41.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 41.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 40.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 40.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 40.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 40.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 40.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 40.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 39.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 39.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 39.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 39.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 38.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 38.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 38.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 38.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 38.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 37.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 37.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 37.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 37.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 37.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 37.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 37.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 37.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 37.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 37.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 36.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 36.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 36.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 35.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 34.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 34.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 33.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 33.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 32.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 31.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 31.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 31.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 30.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 30.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 30.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 29.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 27.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 27.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 26.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 25.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 24.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 21.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 20.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 18.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 14.5
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Brain - Putamen (basal ganglia)
Average nTPM: 55.4
Samples: 205

Max nTPM: 123.0
Min nTPM: 26.9
Std nTPM: 14.0
Median nTPM: 54.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 123.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 102.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 88.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 88.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 87.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 86.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 85.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 85.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 84.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 82.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 80.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 78.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 76.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 76.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 75.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 75.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 75.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 74.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 73.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 73.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 73.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 73.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 72.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 71.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 70.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 70.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 69.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 68.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 68.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 68.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 68.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 68.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 67.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 67.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 67.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 67.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 67.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 67.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 66.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 66.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 65.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 65.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 65.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 65.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 65.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 64.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 64.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 64.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 64.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 64.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 63.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 63.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 63.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 63.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 62.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 62.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 61.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 61.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 61.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 60.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 60.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 60.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 60.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 60.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 60.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 59.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 59.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 59.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 58.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 58.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 58.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 57.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 57.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 57.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 57.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 57.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 57.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 56.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 56.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 56.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 56.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 56.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 56.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 56.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 55.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 55.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 55.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 55.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 55.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 54.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 54.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 54.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 54.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 54.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 54.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 54.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 53.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 53.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 53.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 53.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 53.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 52.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 52.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 52.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 52.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 52.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 52.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 52.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 51.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 51.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 51.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 51.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 51.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 51.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 51.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 50.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 50.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 50.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 49.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 49.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 49.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 49.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 49.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 48.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 48.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 48.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 48.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 48.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 48.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 47.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 47.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 47.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 46.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 46.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 46.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 46.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 46.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 46.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 46.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 45.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 45.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 45.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 44.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 44.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 44.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 44.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 43.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 43.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 43.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 43.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 42.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 42.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 42.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 42.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 42.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 42.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 41.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 41.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 41.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 40.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 40.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 40.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 39.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 39.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 39.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 39.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 39.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 39.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 38.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 38.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 38.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 38.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 38.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 37.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 37.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 36.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 36.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 36.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 35.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 35.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 34.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 34.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 34.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 30.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 28.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 26.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

290.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 162.6
FF:10164-103B2 76 years, female 162.6
Nucleus accumbens
Scaled Tags Per Million: 290.0
FF:10037-101F1 23-56 years, mixed 290.0
Putamen
Scaled Tags Per Million: 241.9
FF:10176-103C5 60 years, female 241.9
Globus pallidus
Scaled Tags Per Million: 204.6
FF:10161-103A8 76 years, female 206.0
FF:10175-103C4 60 years, female 203.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.2
Pig sample Sample description nTPM
Caudate
nTPM: 22.2
Samples: 4

Max nTPM: 26.9
Min nTPM: 18.4
Sample A Female 18.4
Sample B Female 23.6
Sample C Male 26.9
Sample D Male 19.9
Putamen
nTPM: 20.5
Samples: 4

Max nTPM: 28.9
Min nTPM: 16.5
Sample A Female 16.5
Sample B Female 17.3
Sample C Male 28.9
Sample D Male 19.3
Septum
nTPM: 21.5
Samples: 4

Max nTPM: 22.5
Min nTPM: 20.3
Sample A Female 22.5
Sample B Female 20.3
Sample C Male 22.5
Sample D Male 20.5
Ventral pallidum
nTPM: 20.0
Samples: 4

Max nTPM: 22.6
Min nTPM: 17.8
Sample A Female 19.5
Sample B Female 22.6
Sample C Male 20.0
Sample D Male 17.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 39.4
Samples: 4

Max nTPM: 41.1
Min nTPM: 38.3
Sample A Male 38.3
Sample B Male 39.9
Sample C Female 41.1
Sample D Female 38.3
Septum
nTPM: 36.5
Samples: 4

Max nTPM: 38.3
Min nTPM: 34.8
Sample A Male 38.3
Sample B Male 36.4
Sample C Female 36.6
Sample D Female 34.8
Ventral forebrain
nTPM: 53.4
Samples: 4

Max nTPM: 58.2
Min nTPM: 48.1
Sample A Male 55.2
Sample B Male 48.1
Sample C Female 58.2
Sample D Female 51.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
69261426 Antisense, RP_050215_01_E09, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 1.2
69261426 Antisense, RP_050215_01_E09, Mouse strain C57BL/6J (56 days, male) 1.2

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