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VKORC1
HPA
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  • VKORC1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

VKORC1
Synonyms VKCFD2
Gene descriptioni

Full gene name according to HGNC.

Vitamin K epoxide reductase complex subunit 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
FDA approved drug targets
Human disease related genes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p11.2
Chromosome location (bp) 31090842 - 31095980
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000167397 (version 109)
Entrez gene 79001
HGNC HGNC:23663
UniProt Q9BQB6 (UniProt - Evidence at protein level)
neXtProt NX_Q9BQB6
GeneCards VKORC1
Antibodypedia VKORC1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Involved in vitamin K metabolism. Catalytic subunit of the vitamin K epoxide reductase (VKOR) complex which reduces inactive vitamin K 2,3-epoxide to active vitamin K. Vitamin K is required for the gamma-carboxylation of various proteins, including clotting factors, and is required for normal blood coagulation, but also for normal bone development.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Oxidoreductase
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes the catalytic subunit of the vitamin K epoxide reductase complex, which is responsible for the reduction of inactive vitamin K 2,3-epoxide to active vitamin K in the endoplasmic reticulum membrane. Vitamin K is a required co-factor for carboxylation of glutamic acid residues by vitamin K-dependent gamma-carboxylase in blood-clotting enzymes. Allelic variation in this gene is associated with vitamin k-dependent clotting factors combined deficiency of 2, and increased resistance or sensitivity to warfarin, an inhibitor of vitamin K epoxide reductase. Pseudogenes of this gene are located on chromosomes 1 and X. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
VKORC1-201
ENSP00000300851
ENST00000300851
F8W9H0
[Direct mapping] Vitamin-K-epoxide reductase (warfarin-sensitive)
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
GO:0016728 [oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor]
GO:0042373 [vitamin K metabolic process]
GO:0047057 [vitamin-K-epoxide reductase (warfarin-sensitive) activity]
GO:0048038 [quinone binding]
Show all
149 aa
16 kDa
No 0
VKORC1-202
ENSP00000326135
ENST00000319788
Q9BQB6
[Direct mapping] Vitamin K epoxide reductase complex subunit 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006805 [xenobiotic metabolic process]
GO:0007596 [blood coagulation]
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
GO:0016728 [oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor]
GO:0017187 [peptidyl-glutamic acid carboxylation]
GO:0042373 [vitamin K metabolic process]
GO:0047057 [vitamin-K-epoxide reductase (warfarin-sensitive) activity]
GO:0048038 [quinone binding]
GO:0060348 [bone development]
Show all
156 aa
16.7 kDa
No 1
VKORC1-203
ENSP00000346969
ENST00000354895
Q9BQB6
[Direct mapping] Vitamin K epoxide reductase complex subunit 1
Show all
A0A0S2Z5X7
[Target identity:100%; Query identity:100%] Vitamin-K-epoxide reductase (warfarin-sensitive)
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006805 [xenobiotic metabolic process]
GO:0007596 [blood coagulation]
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
GO:0016728 [oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor]
GO:0017187 [peptidyl-glutamic acid carboxylation]
GO:0042373 [vitamin K metabolic process]
GO:0047057 [vitamin-K-epoxide reductase (warfarin-sensitive) activity]
GO:0048038 [quinone binding]
GO:0060348 [bone development]
Show all
92 aa
9.9 kDa
No 0
VKORC1-204
ENSP00000378422
ENST00000394971
A8MV79
[Direct mapping] Vitamin K epoxide reductase complex subunit 1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
Show all
160 aa
17.1 kDa
No 0
VKORC1-205
ENSP00000378426
ENST00000394975
Q9BQB6
[Direct mapping] Vitamin K epoxide reductase complex subunit 1
Show all
A0A0S2Z6I4
[Target identity:100%; Query identity:100%] Vitamin-K-epoxide reductase (warfarin-sensitive)
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006805 [xenobiotic metabolic process]
GO:0007596 [blood coagulation]
GO:0010243 [response to organonitrogen compound]
GO:0014070 [response to organic cyclic compound]
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
GO:0016728 [oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor]
GO:0017187 [peptidyl-glutamic acid carboxylation]
GO:0030193 [regulation of blood coagulation]
GO:0042373 [vitamin K metabolic process]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046677 [response to antibiotic]
GO:0047057 [vitamin-K-epoxide reductase (warfarin-sensitive) activity]
GO:0047058 [vitamin-K-epoxide reductase (warfarin-insensitive) activity]
GO:0048038 [quinone binding]
GO:0050820 [positive regulation of coagulation]
GO:0060348 [bone development]
Show all
163 aa
18.2 kDa
No 1
VKORC1-206
ENSP00000437064
ENST00000420057
H0YF24
[Direct mapping] Vitamin K epoxide reductase complex subunit 1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
Show all
92 aa
10.1 kDa
No 0
VKORC1-207
ENSP00000458994
ENST00000472468
I3L1P9
[Direct mapping] Vitamin-K-epoxide reductase (warfarin-sensitive)
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
GO:0016728 [oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor]
GO:0042373 [vitamin K metabolic process]
GO:0047057 [vitamin-K-epoxide reductase (warfarin-sensitive) activity]
GO:0048038 [quinone binding]
Show all
43 aa
4.9 kDa
No 1
VKORC1-208
ENSP00000417662
ENST00000498155
F2Z3Q2
[Direct mapping] Vitamin K epoxide reductase complex subunit 1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
Show all
161 aa
17.7 kDa
No 0

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