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RPL13
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:934.7 nTPM
FANTOM5:85.1 Scaled Tags Per Million
Pig:6.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051702
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

934.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 934.7
Samples: 246

Max nTPM: 3077.2
Min nTPM: 369.4
Std nTPM: 309.0
Median nTPM: 876.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3077.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1959.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1814.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1796.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1722.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1685.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1627.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1614.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1606.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1599.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1527.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1517.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1497.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1486.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1478.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1455.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1426.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1406.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1352.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1345.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1340.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1340.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1319.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1317.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1317.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1296.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1288.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1283.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1281.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1279.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1275.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1269.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1243.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1219.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1215.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1211.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1210.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1197.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1195.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1191.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1181.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1179.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1150.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1144.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1143.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1140.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1139.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1136.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1125.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1123.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1121.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1106.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1106.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1099.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1094.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1091.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1089.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1084.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1080.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1077.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1077.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1070.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1066.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1065.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1063.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1059.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1055.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1054.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1051.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1050.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1049.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1044.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1042.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1036.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1032.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1028.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1027.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1024.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1024.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1023.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1020.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1018.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1007.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1002.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 997.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 996.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 994.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 993.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 991.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 985.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 965.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 964.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 954.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 949.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 949.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 945.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 945.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 942.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 938.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 936.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 934.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 929.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 929.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 927.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 923.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 922.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 922.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 919.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 919.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 914.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 908.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 908.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 905.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 904.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 902.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 899.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 894.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 891.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 890.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 884.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 884.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 881.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 876.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 875.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 874.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 869.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 868.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 865.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 863.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 862.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 860.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 857.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 854.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 851.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 849.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 848.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 845.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 845.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 844.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 842.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 838.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 831.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 827.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 826.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 826.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 813.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 811.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 805.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 804.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 802.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 801.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 795.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 789.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 789.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 787.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 787.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 787.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 781.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 781.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 780.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 777.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 775.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 768.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 765.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 763.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 761.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 760.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 757.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 755.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 755.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 754.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 753.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 752.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 751.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 751.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 750.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 749.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 743.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 741.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 736.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 729.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 728.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 726.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 725.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 725.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 724.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 722.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 720.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 717.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 714.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 712.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 708.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 707.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 707.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 706.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 705.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 705.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 705.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 704.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 699.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 698.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 698.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 695.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 690.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 686.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 685.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 680.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 678.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 677.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 677.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 677.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 675.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 666.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 653.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 647.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 645.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 645.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 644.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 639.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 639.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 636.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 634.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 631.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 626.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 625.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 622.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 621.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 617.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 617.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 595.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 589.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 585.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 579.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 574.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 562.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 552.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 547.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 547.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 521.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 507.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 481.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 468.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 457.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 427.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 426.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 369.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

85.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 85.1
FF:10164-103B2 76 years, female 85.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.1
Pig sample Sample description nTPM
Caudate
nTPM: 6.1
Samples: 4

Max nTPM: 8.8
Min nTPM: 4.9
Sample A Female 8.8
Sample B Female 5.6
Sample C Male 4.9
Sample D Male 5.2

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