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RAB4B
HPA
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  • RAB4B
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RAB4B
Synonyms FLJ78649, MGC52123
Gene descriptioni

Full gene name according to HGNC.

RAB4B, member RAS oncogene family
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband q13.2
Chromosome location (bp) 40778216 - 40796942
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000167578 (version 109)
Entrez gene 53916
HGNC HGNC:9782
UniProt P61018 (UniProt - Evidence at protein level)
neXtProt NX_P61018
GeneCards RAB4B
Antibodypedia RAB4B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion (Probable). Mediates endosomal tethering and fusion through the interaction with RUFY1 and RAB14 1. Acts as a regulator of platelet alpha-granule release during activation and aggregation of platelets (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

GTP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

RAB proteins, such as RAB4B, are members of the RAS superfamily of small GTPases that are involved in vesicular trafficking (He et al., 2002).[supplied by OMIM, Aug 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RAB4B-201
ENSP00000349560
ENST00000357052
P61018
[Direct mapping] Ras-related protein Rab-4B
Show all
A0A024R0K8
[Target identity:100%; Query identity:100%] Ras-related protein Rab-4
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003674 [molecular_function]
GO:0003924 [GTPase activity]
GO:0003925 [G protein activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0016787 [hydrolase activity]
GO:0030100 [regulation of endocytosis]
GO:0030667 [secretory granule membrane]
GO:0032482 [Rab protein signal transduction]
GO:0032593 [insulin-responsive compartment]
GO:0046323 [glucose import]
GO:0048471 [perinuclear region of cytoplasm]
GO:0055037 [recycling endosome]
Show all
213 aa
23.6 kDa
No 0
RAB4B-203
ENSP00000470246
ENST00000594800
P61018
[Direct mapping] Ras-related protein Rab-4B
Show all
A0A024R0K8
[Target identity:100%; Query identity:100%] Ras-related protein Rab-4
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003674 [molecular_function]
GO:0003924 [GTPase activity]
GO:0003925 [G protein activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0016787 [hydrolase activity]
GO:0030100 [regulation of endocytosis]
GO:0030667 [secretory granule membrane]
GO:0032482 [Rab protein signal transduction]
GO:0032593 [insulin-responsive compartment]
GO:0046323 [glucose import]
GO:0048471 [perinuclear region of cytoplasm]
GO:0055037 [recycling endosome]
Show all
213 aa
23.6 kDa
No 0
RAB4B-208
ENSP00000471504
ENST00000602173
M0R0X1
[Direct mapping] Ras-related protein Rab-4B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003924 [GTPase activity]
GO:0005525 [GTP binding]
Show all
192 aa
21.2 kDa
No 0

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