PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:748.3 nTPM
FANTOM5:214.2 Scaled Tags Per Million
Pig:228.3 nTPM
Mouse:53.7 nTPM
Allen mouse:1.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 748.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 497.7
2301 Female, age 85, both hemispheres 665.9
2090 Male, age 80, both hemispheres 534.7
2188 Female, age 91, both hemispheres 527.4
1984 Male, age 76, both hemispheres 262.9
Area postrema
nTPM: 433.7
2306 Male, age 80, both hemispheres 592.2
2799 Male, age 61, both hemispheres 467.3
2054 Male, age 76, both hemispheres 241.6
Dorsal cochlear nucleus
nTPM: 423.0
2378 Male, age 80, both hemispheres 471.3
2187 Female, age 91, both hemispheres 445.6
2370 Male, age 61, both hemispheres 422.2
2802 Male, age 74, right hemisphere 405.2
2058 Male, age 76, both hemispheres 370.7
Dorsal medullary reticular nucleus
nTPM: 525.5
2373 Male, age 61, both hemispheres 627.1
2040 Female, age 85, both hemispheres 484.3
2088 Male, age 76, both hemispheres 465.2
Dorsal motor vagal complex
nTPM: 386.4
2797 Male, age 61, both hemispheres 588.3
2185 Male, age 76, both hemispheres 543.2
2000 Male, age 74, unknown 374.1
2807 Female, age 85, both hemispheres 366.1
2643 Male, age 74, both hemispheres 363.8
2133 Female, age 91, both hemispheres 339.3
2813 Female, age 72, unknown 271.2
2844 Male, age 55, unknown 245.3
Dorsal tegmental nucleus
nTPM: 399.6
2083 Male, age 80, both hemispheres 528.7
2358 Male, age 61, both hemispheres 400.2
2326 Male, age 74, both hemispheres 373.8
1936 Male, age 76, left hemisphere 295.4
Dorsolateral tegmental area
nTPM: 437.6
2337 Male, age 61, both hemispheres 725.5
2654 Male, age 80, both hemispheres 536.0
2751 Female, age 85, both hemispheres 492.2
2360 Male, age 74, both hemispheres 234.6
2141 Male, age 76, both hemispheres 199.9
Gigantocellular reticular nuclei, medullary
nTPM: 494.5
2314 Male, age 61, both hemispheres 841.7
2387 Female, age 91, both hemispheres 530.5
2310 Male, age 80, both hemispheres 473.7
1876 Female, age 85, both hemispheres 455.5
2022 Male, age 76, right hemisphere 434.0
2462 Male, age 74, both hemispheres 231.6
Gigantocellular reticular nuclei, pars
nTPM: 438.4
2336 Male, age 61, both hemispheres 545.5
2706 Male, age 80, both hemispheres 496.8
2330 Male, age 80, both hemispheres 457.5
2084 Female, age 85, both hemispheres 373.7
2168 Male, age 76, both hemispheres 318.8
Inferior olive
nTPM: 556.4
2178 Male, age 61, both hemispheres 693.4
2628 Female, age 91, both hemispheres 621.6
2085 Female, age 85, both hemispheres 519.4
2563 Male, age 74, both hemispheres 474.1
2379 Male, age 80, both hemispheres 473.6
Kolliker-Fuse nucleus
nTPM: 453.7
2793 Female, age 91, left hemisphere 676.5
2163 Male, age 80, both hemispheres 414.6
2315 Male, age 76, right hemisphere 269.9
Lateral lemniscal nuclei
nTPM: 382.7
2320 Female, age 91, left hemisphere 526.1
2169 Male, age 76, both hemispheres 421.3
2746 Female, age 85, left hemisphere 365.8
2453 Male, age 74, right hemisphere 322.5
2036 Male, age 80, both hemispheres 277.9
Lateral medullary reticular nucleus
nTPM: 571.1
2374 Male, age 61, both hemispheres 765.2
2852 Male, age 80, both hemispheres 722.4
2190 Female, age 85, both hemispheres 524.5
2044 Male, age 76, both hemispheres 499.4
2305 Male, age 74, both hemispheres 487.7
2804 Female, age 91, both hemispheres 427.4
Lateral parabrachial nucleus
nTPM: 571.4
2792 Male, age 76, both hemispheres 806.9
2790 Male, age 61, both hemispheres 647.5
2013 Male, age 80, both hemispheres 500.4
2139 Female, age 85, right hemisphere 330.7
Lateral vestibular nucleus
nTPM: 482.3
2311 Male, age 80, both hemispheres 553.0
2184 Male, age 76, both hemispheres 411.7
Locus coeruleus
nTPM: 179.9
2720 Male, age 74, both hemispheres 265.2
2162 Male, age 80, both hemispheres 258.1
2317 Female, age 72, unknown 194.0
2123 Female, age 91, both hemispheres 173.9
2014 Male, age 55, unknown 139.2
1980 Male, age 76, both hemispheres 120.8
2788 Male, age 74, unknown 108.3
Medial olivary nucleus
nTPM: 605.1
1943 Male, age 61, both hemispheres 736.1
1962 Male, age 76, both hemispheres 638.6
2851 Male, age 80, both hemispheres 625.1
2138 Female, age 91, both hemispheres 420.4
Medial parabrachial nucleus
nTPM: 505.0
2156 Male, age 61, both hemispheres 600.1
2170 Female, age 91, both hemispheres 511.1
2854 Male, age 80, both hemispheres 508.2
2463 Female, age 85, right hemisphere 485.9
2786 Male, age 76, both hemispheres 419.7
Medial periolivary nuclei
nTPM: 389.4
2458 Female, age 91, both hemispheres 493.1
2081 Male, age 80, both hemispheres 460.0
2063 Male, age 76, both hemispheres 374.9
2791 Male, age 74, right hemisphere 361.5
2171 Female, age 85, both hemispheres 257.7
Medial vestibular nucleus
nTPM: 448.1
2624 Male, age 61, both hemispheres 593.9
2803 Female, age 91, both hemispheres 575.0
2801 Male, age 74, both hemispheres 499.9
2093 Male, age 80, both hemispheres 475.5
2743 Female, age 85, both hemispheres 329.3
2134 Male, age 76, both hemispheres 214.8
Motor facial nucleus
nTPM: 446.3
2697 Female, age 85, both hemispheres 606.9
2126 Male, age 61, both hemispheres 547.1
2795 Female, age 91, both hemispheres 427.0
2365 Male, age 74, right hemisphere 406.9
2327 Male, age 80, both hemispheres 353.4
2062 Male, age 76, both hemispheres 336.4
Motor hypoglossal nucleus
nTPM: 457.3
2182 Male, age 80, both hemispheres 697.0
2132 Female, age 85, both hemispheres 563.3
2125 Female, age 91, both hemispheres 492.7
2461 Male, age 61, both hemispheres 377.5
2277 Male, age 76, both hemispheres 155.7
Motor trigeminal nucleus
nTPM: 421.8
2335 Male, age 61, both hemispheres 481.5
2321 Female, age 91, both hemispheres 470.0
2560 Male, age 74, both hemispheres 432.9
2309 Male, age 76, both hemispheres 400.7
2079 Male, age 80, both hemispheres 324.0
Nuclei of the trapezoid body
nTPM: 356.1
2166 Male, age 80, both hemispheres 464.8
2368 Female, age 91, both hemispheres 424.3
1983 Male, age 76, both hemispheres 351.7
2159 Male, age 61, both hemispheres 343.7
2735 Female, age 85, both hemispheres 195.8
Nucleus ambiguus
nTPM: 630.0
2071 Male, age 76, both hemispheres 684.5
2096 Female, age 85, both hemispheres 575.5
Nucleus cuneatus
nTPM: 547.4
2808 Female, age 85, both hemispheres 722.2
2380 Male, age 80, both hemispheres 647.5
2376 Male, age 61, both hemispheres 624.8
2381 Male, age 80, both hemispheres 583.1
2100 Male, age 76, both hemispheres 548.4
2805 Female, age 91, both hemispheres 490.6
2564 Male, age 74, both hemispheres 456.6
2562 Male, age 61, both hemispheres 448.7
2131 Male, age 76, both hemispheres 404.7
Nucleus gracilis
nTPM: 624.4
2382 Male, age 80, both hemispheres 793.7
2299 Female, age 85, both hemispheres 560.7
2627 Male, age 74, both hemispheres 518.9
Nucleus raphe magnus
nTPM: 348.2
2051 Male, age 76, both hemispheres 503.9
2328 Male, age 80, both hemispheres 441.6
2459 Female, age 91, both hemispheres 436.0
2455 Male, age 74, both hemispheres 312.8
2160 Male, age 61, both hemispheres 208.7
2172 Female, age 85, both hemispheres 186.4
Nucleus raphe obscurus
nTPM: 748.3
2845 Female, age 85, midline 822.1
2800 Male, age 61, midline 781.9
2142 Male, age 76, midline 640.8
Nucleus raphe pallidus
nTPM: 619.1
1924 Male, age 61, midline 669.5
2145 Male, age 76, midline 656.5
2183 Male, age 80, midline 531.3
Nucleus tractus solitarii
nTPM: 198.5
2307 Male, age 80, both hemispheres 265.0
2656 Male, age 76, both hemispheres 232.9
2191 Female, age 85, both hemispheres 202.8
2144 Female, age 91, right hemisphere 93.2
Paramedian reticular nucleus
nTPM: 384.6
2057 Male, age 80, both hemispheres 443.3
2052 Male, age 76, both hemispheres 413.7
2050 Female, age 85, both hemispheres 359.8
2313 Male, age 61, both hemispheres 321.8
Parvicellular reticular nuclei
nTPM: 419.6
2119 Male, age 80, both hemispheres 465.5
2095 Male, age 76, both hemispheres 465.2
2558 Male, age 74, both hemispheres 328.1
Parvicellular reticular nuclei, medullary
nTPM: 394.7
2189 Female, age 91, both hemispheres 429.1
2181 Male, age 80, left hemisphere 382.8
2091 Female, age 85, both hemispheres 372.1
Pedunculopontine tegmental nucleus
nTPM: 430.7
2338 Male, age 61, both hemispheres 552.5
2334 Male, age 80, both hemispheres 442.4
1921 Female, age 85, both hemispheres 297.2
Peritrigeminal nucleus
nTPM: 502.7
2179 Male, age 61, both hemispheres 534.4
2067 Female, age 85, both hemispheres 491.1
2136 Male, age 76, both hemispheres 482.7
Pontine nuclei
nTPM: 413.2
2319 Female, age 91, both hemispheres 546.0
2454 Male, age 74, left hemisphere 524.5
1968 Male, age 76, left hemisphere 488.2
2115 Male, age 80, left hemisphere 446.5
2109 Female, age 72, unknown 404.8
1863 Male, age 55, unknown 400.8
2787 Female, age 85, both hemispheres 255.5
2727 Male, age 61, right hemisphere 239.4
Pontine raphe nucleus
nTPM: 274.2
2853 Male, age 76, midline 293.0
2122 Female, age 85, midline 255.4
Posteroventral cochlear nucleus
nTPM: 495.4
2341 Male, age 80, both hemispheres 557.8
2371 Male, age 61, both hemispheres 544.6
2135 Female, age 91, both hemispheres 534.8
2070 Male, age 76, both hemispheres 532.2
2752 Female, age 85, both hemispheres 307.5
Prepositus hypoglossal nucleus
nTPM: 430.1
2855 Female, age 85, right hemisphere 566.4
2086 Male, age 80, both hemispheres 293.8
Principal sensory trigeminal nucleus
nTPM: 378.2
2367 Female, age 91, left hemisphere 516.0
2324 Male, age 76, both hemispheres 410.6
2158 Male, age 61, both hemispheres 321.9
2008 Male, age 80, left hemisphere 264.2
Reticular pontine nucleus, caudal
nTPM: 472.4
2457 Female, age 91, both hemispheres 565.1
2559 Male, age 74, both hemispheres 513.7
2092 Male, age 76, both hemispheres 482.2
2332 Male, age 80, right hemisphere 328.5
Reticular pontine nucleus, oral
nTPM: 462.8
2366 Female, age 91, both hemispheres 573.0
1939 Male, age 80, both hemispheres 492.8
2167 Male, age 76, both hemispheres 481.1
2361 Male, age 74, both hemispheres 402.9
2012 Female, age 85, both hemispheres 364.1
Reticulotegmental nucleus
nTPM: 385.8
2322 Female, age 91, both hemispheres 456.5
2333 Male, age 80, both hemispheres 437.6
2452 Male, age 74, both hemispheres 408.8
2325 Male, age 76, both hemispheres 240.4
Spinal trigeminal nucleus, caudal
nTPM: 526.3
2312 Male, age 61, both hemispheres 665.9
2308 Male, age 80, both hemispheres 561.3
2447 Male, age 76, both hemispheres 508.9
2390 Female, age 91, both hemispheres 472.6
2642 Male, age 74, both hemispheres 422.8
Spinal trigeminal nucleus, interpolar
nTPM: 383.4
2033 Male, age 80, both hemispheres 434.0
2386 Female, age 85, both hemispheres 423.0
2389 Female, age 91, both hemispheres 407.7
2625 Male, age 61, both hemispheres 338.5
2066 Male, age 76, right hemisphere 313.7
Spinal trigeminal nucleus, oral
nTPM: 401.0
2164 Male, age 80, both hemispheres 484.4
1978 Male, age 76, both hemispheres 448.7
2737 Female, age 85, both hemispheres 269.9
Spinal vestibular nucleus
nTPM: 524.4
2748 Male, age 76, both hemispheres 686.5
2806 Female, age 85, both hemispheres 614.3
2780 Male, age 80, both hemispheres 483.7
2384 Male, age 74, both hemispheres 461.1
2186 Female, age 91, both hemispheres 458.7
2796 Male, age 61, both hemispheres 442.2
Subcoeruleus area
nTPM: 394.8
2369 Female, age 85, left hemisphere 601.3
2089 Male, age 76, left hemisphere 381.9
1958 Male, age 80, both hemispheres 363.9
2323 Female, age 91, left hemisphere 325.9
2451 Male, age 74, both hemispheres 301.3
Superior olive
nTPM: 448.0
2020 Male, age 76, both hemispheres 542.5
2561 Female, age 91, both hemispheres 518.6
2329 Male, age 80, right hemisphere 481.5
2364 Male, age 74, right hemisphere 398.6
1875 Female, age 85, both hemispheres 298.8
Superior vestibular nucleus
nTPM: 346.3
2015 Male, age 80, both hemispheres 432.7
2061 Male, age 76, both hemispheres 355.3
2383 Male, age 74, both hemispheres 250.8
Ventral medullary reticular nucleus
nTPM: 635.6
2372 Male, age 61, both hemispheres 686.4
2060 Male, age 76, both hemispheres 584.9
Ventral periolivary nuclei
nTPM: 402.6
2023 Male, age 76, both hemispheres 559.1
2165 Male, age 80, both hemispheres 421.8
2794 Female, age 91, left hemisphere 346.8
2130 Female, age 85, both hemispheres 282.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 502.0
2180 Male, age 61, both hemispheres 608.7
2118 Male, age 80, both hemispheres 587.8
2741 Female, age 85, both hemispheres 449.1
2302 Female, age 91, both hemispheres 435.6
1986 Male, age 76, both hemispheres 428.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 459.4
2456 Female, age 91, both hemispheres 556.2
2359 Male, age 61, both hemispheres 539.9
2840 Female, age 85, both hemispheres 444.2
1959 Male, age 76, both hemispheres 431.9
2161 Male, age 80, both hemispheres 428.6
2449 Male, age 74, both hemispheres 355.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 214.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 214.2
FF:10182-103D2 60 years, female 254.1
FF:10165-103B3 76 years, female 174.4
Medulla oblongata
Scaled Tags Per Million: 139.7
FF:10038-101F2 18-64 years, mixed 205.3
FF:10174-103C3 60 years, female 119.9
FF:10155-103A2 76 years, female 93.9
Pons
Scaled Tags Per Million: 180.0
FF:10033-101E6 18-54 years, mixed 180.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 228.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 228.4
Samples: 4

Max nTPM: 263.8
Min nTPM: 195.8
Sample A Female 216.6
Sample B Female 195.8
Sample C Male 237.2
Sample D Male 263.8
Pons
nTPM: 168.7
Samples: 4

Max nTPM: 263.5
Min nTPM: 106.7
Sample A Female 106.7
Sample B Female 135.4
Sample C Male 169.0
Sample D Male 263.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 53.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 53.7
Samples: 4

Max nTPM: 61.9
Min nTPM: 42.3
Sample A Male 61.9
Sample B Male 42.3
Sample C Female 58.8
Sample D Female 51.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.0
70546384 Antisense, RP_050623_04_C01, Mouse strain C57BL/6J (56 days, male) 1.0
Pons
Expression energy: 0.7
70546384 Antisense, RP_050623_04_C01, Mouse strain C57BL/6J (56 days, male) 0.7

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