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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:628.3 nTPM
HPA Brain:667.0 nTPM
GTEx:628.3 nTPM
FANTOM5:1010.1 Scaled Tags Per Million
Pig:503.1 nTPM
Mouse:792.5 nTPM
Allen mouse:20.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040534Antibody HPA057351Antibody CAB007795
Glial cells MediumNot detectedLow
Neuronal cells MediumMediumLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

667.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 607.7
2846 Female, age 79, unknown 715.7
2290 Female, age 72, unknown 690.0
1781 Male, age 74, unknown 616.2
2481 Female, age 94, left hemisphere 605.1
2288 Male, age 75, left hemisphere 579.5
1857 Female, age 85, left hemisphere 562.7
2289 Male, age 61, right hemisphere 553.9
1854 Male, age 80, left hemisphere 538.9
Globus pallidus, externus
nTPM: 636.4
1996 Male, age 80, right hemisphere 676.1
2772 Female, age 79, unknown 661.5
2395 Male, age 75, both hemispheres 630.4
2646 Male, age 61, right hemisphere 613.0
2567 Female, age 72, unknown 601.2
Globus pallidus, internus
nTPM: 623.9
2287 Male, age 75, right hemisphere 752.0
2483 Female, age 94, right hemisphere 684.5
2778 Female, age 91, both hemispheres 601.1
1818 Male, age 74, unknown 596.7
2566 Female, age 72, unknown 588.2
2111 Female, age 85, right hemisphere 573.3
2037 Male, age 80, right hemisphere 571.5
Nucleus accumbens
nTPM: 560.4
1783 Male, age 74, unknown 629.0
1856 Female, age 91, right hemisphere 609.7
2698 Female, age 72, unknown 575.7
2286 Male, age 75, left hemisphere 562.8
1806 Female, age 85, left hemisphere 560.0
2391 Female, age 94, left hemisphere 530.7
2732 Male, age 80, right hemisphere 525.5
2824 Male, age 61, right hemisphere 489.5
Nucleus basalis of Meynert
nTPM: 620.2
2484 Female, age 94, left hemisphere 662.0
2569 Male, age 61, both hemispheres 647.4
2821 Male, age 75, both hemispheres 604.5
2393 Male, age 80, right hemisphere 567.0
Nucleus of the diagonal band
nTPM: 569.7
2029 Male, age 61, right hemisphere 594.4
1812 Female, age 91, both hemispheres 586.3
2775 Male, age 80, right hemisphere 582.5
2195 Female, age 85, both hemispheres 563.2
1979 Male, age 74, unknown 522.0
Putamen
nTPM: 667.0
2489 Female, age 72, unknown 802.9
2647 Male, age 75, left hemisphere 733.8
2466 Female, age 79, unknown 693.1
2482 Female, age 94, left hemisphere 651.6
1829 Male, age 74, unknown 638.5
1937 Female, age 91, right hemisphere 589.7
1838 Male, age 80, right hemisphere 559.7
Septal nuclei
nTPM: 561.3
2031 Female, age 72, unknown 615.3
2059 Female, age 85, both hemispheres 605.6
1960 Male, age 74, unknown 592.2
2199 Male, age 80, right hemisphere 538.3
2394 Male, age 61, left hemisphere 528.0
2629 Female, age 94, right hemisphere 526.3
2009 Female, age 91, both hemispheres 523.5
Stria terminalis, bed nucleus
nTPM: 548.5
1974 Female, age 91, both hemispheres 569.9
2201 Male, age 74, unknown 544.8
2486 Female, age 94, both hemispheres 530.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

628.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 552.0
Samples: 246

Max nTPM: 992.3
Min nTPM: 259.6
Std nTPM: 122.9
Median nTPM: 543.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 992.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 944.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 902.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 892.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 892.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 878.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 863.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 809.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 804.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 800.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 792.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 775.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 767.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 762.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 752.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 743.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 733.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 732.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 731.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 727.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 726.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 721.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 714.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 711.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 708.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 705.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 700.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 698.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 697.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 689.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 688.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 687.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 687.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 681.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 678.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 676.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 675.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 673.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 667.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 659.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 658.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 655.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 654.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 652.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 651.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 650.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 648.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 648.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 644.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 644.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 639.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 638.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 637.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 636.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 636.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 633.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 632.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 631.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 629.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 627.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 626.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 621.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 616.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 616.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 615.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 613.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 612.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 612.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 611.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 608.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 606.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 605.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 604.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 602.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 599.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 598.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 597.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 597.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 596.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 594.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 592.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 589.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 588.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 587.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 587.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 587.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 587.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 586.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 584.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 580.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 579.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 579.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 579.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 579.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 578.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 578.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 577.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 575.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 575.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 574.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 573.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 573.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 572.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 572.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 570.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 570.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 569.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 567.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 566.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 566.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 565.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 561.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 557.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 555.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 555.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 551.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 550.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 549.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 549.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 549.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 546.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 545.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 543.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 542.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 542.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 541.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 540.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 538.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 537.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 536.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 536.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 534.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 534.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 532.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 527.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 527.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 523.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 521.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 519.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 519.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 516.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 515.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 514.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 514.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 512.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 510.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 510.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 509.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 509.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 509.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 508.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 507.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 503.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 502.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 500.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 499.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 498.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 498.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 497.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 495.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 494.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 494.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 493.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 489.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 488.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 488.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 487.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 487.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 482.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 481.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 480.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 479.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 477.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 476.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 475.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 475.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 475.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 472.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 471.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 469.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 465.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 464.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 463.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 462.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 461.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 460.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 457.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 456.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 452.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 451.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 450.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 450.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 449.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 449.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 448.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 448.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 448.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 447.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 446.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 445.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 445.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 442.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 439.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 439.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 438.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 437.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 434.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 434.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 433.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 432.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 430.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 430.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 428.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 426.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 422.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 420.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 419.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 418.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 417.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 414.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 414.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 413.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 410.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 406.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 405.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 405.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 403.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 402.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 401.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 400.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 394.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 392.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 379.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 379.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 376.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 371.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 370.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 370.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 355.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 348.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 347.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 307.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 306.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 287.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 278.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 259.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 584.2
Samples: 246

Max nTPM: 1217.7
Min nTPM: 293.0
Std nTPM: 172.6
Median nTPM: 542.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1217.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1172.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1159.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1129.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1073.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1040.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1033.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1018.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1011.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 993.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 991.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 958.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 942.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 941.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 930.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 906.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 887.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 886.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 870.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 870.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 855.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 855.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 837.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 832.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 821.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 815.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 809.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 798.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 787.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 786.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 771.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 770.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 765.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 764.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 760.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 756.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 752.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 751.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 742.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 738.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 736.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 731.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 721.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 718.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 716.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 708.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 708.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 700.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 694.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 694.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 693.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 690.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 688.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 682.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 681.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 672.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 671.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 669.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 667.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 666.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 663.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 662.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 660.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 659.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 659.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 658.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 658.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 656.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 656.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 652.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 650.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 649.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 646.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 646.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 644.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 643.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 636.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 628.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 627.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 625.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 622.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 621.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 620.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 616.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 614.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 605.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 605.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 605.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 604.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 602.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 600.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 598.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 597.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 595.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 593.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 589.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 586.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 584.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 583.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 583.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 580.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 579.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 578.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 574.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 570.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 570.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 568.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 566.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 564.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 563.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 561.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 561.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 560.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 558.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 556.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 553.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 550.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 547.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 546.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 545.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 543.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 542.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 542.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 542.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 540.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 536.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 534.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 534.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 533.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 533.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 532.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 530.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 530.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 529.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 529.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 527.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 525.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 518.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 517.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 516.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 515.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 515.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 515.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 514.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 514.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 513.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 512.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 511.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 511.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 510.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 508.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 508.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 505.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 503.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 502.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 501.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 499.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 497.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 496.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 495.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 494.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 491.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 488.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 486.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 486.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 485.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 485.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 482.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 480.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 478.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 476.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 475.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 475.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 475.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 474.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 473.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 472.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 469.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 469.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 466.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 466.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 466.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 466.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 463.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 462.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 461.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 461.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 459.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 456.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 455.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 455.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 454.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 453.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 450.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 449.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 447.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 445.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 441.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 441.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 440.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 439.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 436.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 436.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 434.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 433.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 432.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 430.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 427.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 424.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 423.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 423.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 422.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 421.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 420.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 420.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 419.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 419.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 416.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 413.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 412.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 412.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 410.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 409.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 409.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 407.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 405.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 397.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 391.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 388.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 388.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 388.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 386.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 386.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 385.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 384.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 382.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 377.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 375.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 374.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 366.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 330.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 326.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 324.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 323.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 303.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 293.0
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Brain - Putamen (basal ganglia)
Average nTPM: 628.3
Samples: 205

Max nTPM: 1160.1
Min nTPM: 283.8
Std nTPM: 154.1
Median nTPM: 604.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1160.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1145.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1137.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1056.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1053.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1000.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 968.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 964.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 961.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 938.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 917.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 887.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 875.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 874.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 861.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 856.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 851.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 851.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 843.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 842.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 841.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 830.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 828.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 823.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 815.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 794.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 793.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 791.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 788.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 786.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 786.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 773.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 771.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 769.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 760.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 759.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 759.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 749.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 745.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 744.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 743.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 741.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 739.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 732.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 730.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 729.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 721.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 714.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 714.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 709.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 707.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 705.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 702.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 700.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 699.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 698.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 697.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 696.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 689.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 688.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 685.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 681.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 679.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 676.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 674.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 674.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 673.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 673.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 672.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 672.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 667.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 667.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 664.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 663.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 662.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 662.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 662.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 656.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 654.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 652.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 651.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 650.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 645.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 645.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 642.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 642.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 641.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 638.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 637.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 636.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 633.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 632.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 631.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 625.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 616.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 614.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 612.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 611.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 611.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 608.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 608.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 608.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 604.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 602.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 601.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 600.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 599.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 598.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 597.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 596.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 596.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 590.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 584.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 580.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 579.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 579.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 578.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 577.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 577.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 577.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 576.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 575.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 574.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 573.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 572.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 569.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 566.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 565.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 551.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 550.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 547.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 547.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 546.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 545.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 544.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 543.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 541.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 538.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 537.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 537.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 537.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 537.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 535.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 534.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 529.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 528.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 528.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 525.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 524.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 523.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 522.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 521.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 518.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 517.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 512.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 510.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 509.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 508.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 506.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 505.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 505.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 504.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 503.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 502.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 499.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 498.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 494.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 491.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 490.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 490.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 490.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 488.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 486.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 482.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 482.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 480.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 479.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 478.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 477.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 476.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 476.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 470.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 470.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 465.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 465.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 455.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 454.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 450.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 444.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 443.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 440.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 433.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 431.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 425.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 424.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 424.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 421.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 419.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 416.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 410.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 402.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 395.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 381.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 288.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 283.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1010.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 663.1
FF:10164-103B2 76 years, female 663.1
Nucleus accumbens
Scaled Tags Per Million: 1010.1
FF:10037-101F1 23-56 years, mixed 1010.1
Putamen
Scaled Tags Per Million: 720.7
FF:10176-103C5 60 years, female 720.7
Globus pallidus
Scaled Tags Per Million: 531.4
FF:10161-103A8 76 years, female 563.8
FF:10175-103C4 60 years, female 499.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

503.1
Pig sample Sample description nTPM
Caudate
nTPM: 451.3
Samples: 4

Max nTPM: 532.2
Min nTPM: 391.5
Sample A Female 391.5
Sample B Female 473.6
Sample C Male 532.2
Sample D Male 408.0
Putamen
nTPM: 503.2
Samples: 4

Max nTPM: 626.1
Min nTPM: 426.1
Sample A Female 450.8
Sample B Female 426.1
Sample C Male 626.1
Sample D Male 509.6
Septum
nTPM: 472.9
Samples: 4

Max nTPM: 546.8
Min nTPM: 373.0
Sample A Female 546.8
Sample B Female 457.0
Sample C Male 514.8
Sample D Male 373.0
Ventral pallidum
nTPM: 493.4
Samples: 4

Max nTPM: 547.7
Min nTPM: 438.0
Sample A Female 438.0
Sample B Female 544.7
Sample C Male 547.7
Sample D Male 443.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

792.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 728.3
Samples: 4

Max nTPM: 816.7
Min nTPM: 622.2
Sample A Male 727.6
Sample B Male 816.7
Sample C Female 622.2
Sample D Female 746.5
Septum
nTPM: 792.5
Samples: 4

Max nTPM: 858.7
Min nTPM: 730.0
Sample A Male 755.3
Sample B Male 858.7
Sample C Female 825.8
Sample D Female 730.0
Ventral forebrain
nTPM: 760.1
Samples: 4

Max nTPM: 882.7
Min nTPM: 711.7
Sample A Male 711.7
Sample B Male 733.7
Sample C Female 882.7
Sample D Female 712.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 20.4
308055136 Antisense, RP_140710_01_A05, Mouse strain C57BL/6J (56 days, male) 25.1
67936204 Antisense, RP_041102_01_B02, Mouse strain C57BL/6J (56 days, male) 15.8
Pallidum
Expression energy: 20.8
308055136 Antisense, RP_140710_01_A05, Mouse strain C57BL/6J (56 days, male) 23.7
67936204 Antisense, RP_041102_01_B02, Mouse strain C57BL/6J (56 days, male) 17.9

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