PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:726.0 nTPM
FANTOM5:865.6 Scaled Tags Per Million
Pig:556.0 nTPM
Mouse:678.4 nTPM
Allen mouse:19.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 726.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 629.4
2301 Female, age 85, both hemispheres 661.9
2090 Male, age 80, both hemispheres 637.4
1984 Male, age 76, both hemispheres 627.0
2188 Female, age 91, both hemispheres 591.1
Area postrema
nTPM: 569.6
2306 Male, age 80, both hemispheres 664.9
2799 Male, age 61, both hemispheres 558.9
2054 Male, age 76, both hemispheres 485.0
Dorsal cochlear nucleus
nTPM: 656.6
2802 Male, age 74, right hemisphere 725.0
2058 Male, age 76, both hemispheres 669.8
2378 Male, age 80, both hemispheres 667.2
2187 Female, age 91, both hemispheres 663.5
2370 Male, age 61, both hemispheres 557.4
Dorsal medullary reticular nucleus
nTPM: 619.0
2088 Male, age 76, both hemispheres 653.4
2040 Female, age 85, both hemispheres 634.8
2373 Male, age 61, both hemispheres 568.9
Dorsal motor vagal complex
nTPM: 618.5
2643 Male, age 74, both hemispheres 710.4
2133 Female, age 91, both hemispheres 667.7
2000 Male, age 74, unknown 653.1
2185 Male, age 76, both hemispheres 652.7
2844 Male, age 55, unknown 613.7
2797 Male, age 61, both hemispheres 583.9
2813 Female, age 72, unknown 534.0
2807 Female, age 85, both hemispheres 532.6
Dorsal tegmental nucleus
nTPM: 646.6
2083 Male, age 80, both hemispheres 684.4
2326 Male, age 74, both hemispheres 684.2
2358 Male, age 61, both hemispheres 639.5
1936 Male, age 76, left hemisphere 578.1
Dorsolateral tegmental area
nTPM: 623.2
2337 Male, age 61, both hemispheres 724.7
2654 Male, age 80, both hemispheres 663.3
2141 Male, age 76, both hemispheres 605.9
2751 Female, age 85, both hemispheres 579.2
2360 Male, age 74, both hemispheres 543.0
Gigantocellular reticular nuclei, medullary
nTPM: 644.8
2462 Male, age 74, both hemispheres 753.4
2314 Male, age 61, both hemispheres 671.6
2310 Male, age 80, both hemispheres 671.5
2022 Male, age 76, right hemisphere 620.8
2387 Female, age 91, both hemispheres 605.7
1876 Female, age 85, both hemispheres 545.6
Gigantocellular reticular nuclei, pars
nTPM: 656.8
2168 Male, age 76, both hemispheres 771.9
2084 Female, age 85, both hemispheres 696.9
2336 Male, age 61, both hemispheres 618.0
2330 Male, age 80, both hemispheres 609.8
2706 Male, age 80, both hemispheres 587.2
Inferior olive
nTPM: 642.8
2178 Male, age 61, both hemispheres 658.0
2628 Female, age 91, both hemispheres 657.3
2563 Male, age 74, both hemispheres 646.3
2085 Female, age 85, both hemispheres 642.5
2379 Male, age 80, both hemispheres 610.0
Kolliker-Fuse nucleus
nTPM: 608.1
2163 Male, age 80, both hemispheres 643.7
2793 Female, age 91, left hemisphere 632.1
2315 Male, age 76, right hemisphere 548.5
Lateral lemniscal nuclei
nTPM: 673.9
2169 Male, age 76, both hemispheres 770.5
2746 Female, age 85, left hemisphere 702.3
2453 Male, age 74, right hemisphere 662.5
2320 Female, age 91, left hemisphere 653.8
2036 Male, age 80, both hemispheres 580.4
Lateral medullary reticular nucleus
nTPM: 642.6
2852 Male, age 80, both hemispheres 678.9
2044 Male, age 76, both hemispheres 658.0
2804 Female, age 91, both hemispheres 657.9
2190 Female, age 85, both hemispheres 639.5
2374 Male, age 61, both hemispheres 624.0
2305 Male, age 74, both hemispheres 597.2
Lateral parabrachial nucleus
nTPM: 613.6
2139 Female, age 85, right hemisphere 741.3
2013 Male, age 80, both hemispheres 634.2
2790 Male, age 61, both hemispheres 555.2
2792 Male, age 76, both hemispheres 523.7
Lateral vestibular nucleus
nTPM: 679.2
2311 Male, age 80, both hemispheres 709.8
2184 Male, age 76, both hemispheres 648.5
Locus coeruleus
nTPM: 606.2
2123 Female, age 91, both hemispheres 677.2
2162 Male, age 80, both hemispheres 660.9
2720 Male, age 74, both hemispheres 624.6
2317 Female, age 72, unknown 609.3
1980 Male, age 76, both hemispheres 599.4
2014 Male, age 55, unknown 596.7
2788 Male, age 74, unknown 475.0
Medial olivary nucleus
nTPM: 597.9
2138 Female, age 91, both hemispheres 602.6
1943 Male, age 61, both hemispheres 601.4
2851 Male, age 80, both hemispheres 598.8
1962 Male, age 76, both hemispheres 588.8
Medial parabrachial nucleus
nTPM: 633.5
2170 Female, age 91, both hemispheres 691.0
2463 Female, age 85, right hemisphere 638.4
2786 Male, age 76, both hemispheres 616.3
2156 Male, age 61, both hemispheres 611.2
2854 Male, age 80, both hemispheres 610.5
Medial periolivary nuclei
nTPM: 674.0
2063 Male, age 76, both hemispheres 848.8
2171 Female, age 85, both hemispheres 765.3
2081 Male, age 80, both hemispheres 608.9
2458 Female, age 91, both hemispheres 582.6
2791 Male, age 74, right hemisphere 564.6
Medial vestibular nucleus
nTPM: 651.8
2093 Male, age 80, both hemispheres 714.1
2801 Male, age 74, both hemispheres 657.5
2803 Female, age 91, both hemispheres 640.1
2134 Male, age 76, both hemispheres 639.5
2624 Male, age 61, both hemispheres 634.1
2743 Female, age 85, both hemispheres 625.7
Motor facial nucleus
nTPM: 682.8
2062 Male, age 76, both hemispheres 869.9
2795 Female, age 91, both hemispheres 710.1
2365 Male, age 74, right hemisphere 647.1
2327 Male, age 80, both hemispheres 628.4
2126 Male, age 61, both hemispheres 623.4
2697 Female, age 85, both hemispheres 617.8
Motor hypoglossal nucleus
nTPM: 643.1
2125 Female, age 91, both hemispheres 730.6
2182 Male, age 80, both hemispheres 720.3
2132 Female, age 85, both hemispheres 705.0
2461 Male, age 61, both hemispheres 545.4
2277 Male, age 76, both hemispheres 514.0
Motor trigeminal nucleus
nTPM: 630.2
2560 Male, age 74, both hemispheres 674.9
2079 Male, age 80, both hemispheres 630.7
2335 Male, age 61, both hemispheres 628.1
2321 Female, age 91, both hemispheres 609.1
2309 Male, age 76, both hemispheres 608.3
Nuclei of the trapezoid body
nTPM: 726.0
1983 Male, age 76, both hemispheres 850.1
2735 Female, age 85, both hemispheres 805.1
2159 Male, age 61, both hemispheres 697.1
2368 Female, age 91, both hemispheres 656.2
2166 Male, age 80, both hemispheres 621.3
Nucleus ambiguus
nTPM: 723.3
2096 Female, age 85, both hemispheres 840.2
2071 Male, age 76, both hemispheres 606.3
Nucleus cuneatus
nTPM: 623.7
2100 Male, age 76, both hemispheres 714.6
2131 Male, age 76, both hemispheres 697.7
2564 Male, age 74, both hemispheres 670.2
2805 Female, age 91, both hemispheres 623.9
2380 Male, age 80, both hemispheres 604.9
2381 Male, age 80, both hemispheres 593.1
2808 Female, age 85, both hemispheres 577.4
2562 Male, age 61, both hemispheres 572.9
2376 Male, age 61, both hemispheres 558.9
Nucleus gracilis
nTPM: 639.3
2299 Female, age 85, both hemispheres 655.1
2382 Male, age 80, both hemispheres 652.5
2627 Male, age 74, both hemispheres 610.2
Nucleus raphe magnus
nTPM: 710.8
2172 Female, age 85, both hemispheres 818.3
2160 Male, age 61, both hemispheres 785.4
2051 Male, age 76, both hemispheres 713.5
2455 Male, age 74, both hemispheres 682.8
2328 Male, age 80, both hemispheres 657.2
2459 Female, age 91, both hemispheres 607.5
Nucleus raphe obscurus
nTPM: 580.2
2800 Male, age 61, midline 598.5
2845 Female, age 85, midline 585.7
2142 Male, age 76, midline 556.3
Nucleus raphe pallidus
nTPM: 670.0
2183 Male, age 80, midline 678.9
1924 Male, age 61, midline 675.8
2145 Male, age 76, midline 655.3
Nucleus tractus solitarii
nTPM: 527.6
2307 Male, age 80, both hemispheres 559.6
2191 Female, age 85, both hemispheres 557.3
2656 Male, age 76, both hemispheres 543.1
2144 Female, age 91, right hemisphere 450.5
Paramedian reticular nucleus
nTPM: 584.0
2057 Male, age 80, both hemispheres 646.2
2050 Female, age 85, both hemispheres 624.8
2313 Male, age 61, both hemispheres 577.4
2052 Male, age 76, both hemispheres 487.6
Parvicellular reticular nuclei
nTPM: 654.5
2558 Male, age 74, both hemispheres 708.5
2095 Male, age 76, both hemispheres 640.2
2119 Male, age 80, both hemispheres 615.0
Parvicellular reticular nuclei, medullary
nTPM: 670.8
2091 Female, age 85, both hemispheres 682.7
2189 Female, age 91, both hemispheres 674.3
2181 Male, age 80, left hemisphere 655.2
Pedunculopontine tegmental nucleus
nTPM: 604.6
2334 Male, age 80, both hemispheres 627.0
2338 Male, age 61, both hemispheres 621.9
1921 Female, age 85, both hemispheres 564.9
Peritrigeminal nucleus
nTPM: 665.0
2067 Female, age 85, both hemispheres 707.3
2179 Male, age 61, both hemispheres 646.6
2136 Male, age 76, both hemispheres 641.2
Pontine nuclei
nTPM: 719.3
2787 Female, age 85, both hemispheres 946.3
1968 Male, age 76, left hemisphere 834.0
1863 Male, age 55, unknown 768.9
2727 Male, age 61, right hemisphere 732.1
2109 Female, age 72, unknown 679.1
2115 Male, age 80, left hemisphere 632.0
2319 Female, age 91, both hemispheres 619.9
2454 Male, age 74, left hemisphere 542.3
Pontine raphe nucleus
nTPM: 651.8
2122 Female, age 85, midline 718.0
2853 Male, age 76, midline 585.6
Posteroventral cochlear nucleus
nTPM: 603.2
2752 Female, age 85, both hemispheres 697.5
2070 Male, age 76, both hemispheres 616.0
2371 Male, age 61, both hemispheres 596.0
2341 Male, age 80, both hemispheres 568.2
2135 Female, age 91, both hemispheres 538.2
Prepositus hypoglossal nucleus
nTPM: 673.6
2086 Male, age 80, both hemispheres 709.9
2855 Female, age 85, right hemisphere 637.4
Principal sensory trigeminal nucleus
nTPM: 664.9
2158 Male, age 61, both hemispheres 794.6
2324 Male, age 76, both hemispheres 650.1
2008 Male, age 80, left hemisphere 622.3
2367 Female, age 91, left hemisphere 592.6
Reticular pontine nucleus, caudal
nTPM: 657.0
2092 Male, age 76, both hemispheres 715.9
2332 Male, age 80, right hemisphere 665.3
2457 Female, age 91, both hemispheres 628.0
2559 Male, age 74, both hemispheres 618.6
Reticular pontine nucleus, oral
nTPM: 611.9
2167 Male, age 76, both hemispheres 637.3
2012 Female, age 85, both hemispheres 630.0
2361 Male, age 74, both hemispheres 613.4
2366 Female, age 91, both hemispheres 590.9
1939 Male, age 80, both hemispheres 587.8
Reticulotegmental nucleus
nTPM: 643.2
2452 Male, age 74, both hemispheres 691.6
2325 Male, age 76, both hemispheres 638.7
2333 Male, age 80, both hemispheres 624.3
2322 Female, age 91, both hemispheres 618.3
Spinal trigeminal nucleus, caudal
nTPM: 645.3
2447 Male, age 76, both hemispheres 737.8
2390 Female, age 91, both hemispheres 651.0
2308 Male, age 80, both hemispheres 638.3
2312 Male, age 61, both hemispheres 603.3
2642 Male, age 74, both hemispheres 596.2
Spinal trigeminal nucleus, interpolar
nTPM: 640.8
2066 Male, age 76, right hemisphere 714.5
2033 Male, age 80, both hemispheres 657.5
2389 Female, age 91, both hemispheres 639.1
2625 Male, age 61, both hemispheres 616.0
2386 Female, age 85, both hemispheres 577.1
Spinal trigeminal nucleus, oral
nTPM: 620.7
2164 Male, age 80, both hemispheres 648.5
1978 Male, age 76, both hemispheres 628.5
2737 Female, age 85, both hemispheres 585.1
Spinal vestibular nucleus
nTPM: 699.7
2384 Male, age 74, both hemispheres 768.2
2780 Male, age 80, both hemispheres 732.9
2748 Male, age 76, both hemispheres 732.6
2186 Female, age 91, both hemispheres 721.0
2806 Female, age 85, both hemispheres 654.8
2796 Male, age 61, both hemispheres 588.7
Subcoeruleus area
nTPM: 649.7
2451 Male, age 74, both hemispheres 739.3
2089 Male, age 76, left hemisphere 697.7
2323 Female, age 91, left hemisphere 645.9
1958 Male, age 80, both hemispheres 598.8
2369 Female, age 85, left hemisphere 566.8
Superior olive
nTPM: 648.9
2020 Male, age 76, both hemispheres 714.3
1875 Female, age 85, both hemispheres 654.6
2561 Female, age 91, both hemispheres 653.7
2329 Male, age 80, right hemisphere 630.4
2364 Male, age 74, right hemisphere 591.6
Superior vestibular nucleus
nTPM: 598.3
2015 Male, age 80, both hemispheres 662.7
2061 Male, age 76, both hemispheres 591.0
2383 Male, age 74, both hemispheres 541.1
Ventral medullary reticular nucleus
nTPM: 647.3
2060 Male, age 76, both hemispheres 686.0
2372 Male, age 61, both hemispheres 608.6
Ventral periolivary nuclei
nTPM: 693.9
2130 Female, age 85, both hemispheres 805.5
2165 Male, age 80, both hemispheres 685.0
2023 Male, age 76, both hemispheres 665.5
2794 Female, age 91, left hemisphere 619.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 661.2
2302 Female, age 91, both hemispheres 692.0
2118 Male, age 80, both hemispheres 671.6
2741 Female, age 85, both hemispheres 665.9
1986 Male, age 76, both hemispheres 653.7
2180 Male, age 61, both hemispheres 622.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 640.9
2161 Male, age 80, both hemispheres 667.0
2449 Male, age 74, both hemispheres 665.6
1959 Male, age 76, both hemispheres 662.6
2359 Male, age 61, both hemispheres 618.9
2456 Female, age 91, both hemispheres 618.3
2840 Female, age 85, both hemispheres 612.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 865.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 621.5
FF:10182-103D2 60 years, female 630.2
FF:10165-103B3 76 years, female 612.8
Medulla oblongata
Scaled Tags Per Million: 736.3
FF:10038-101F2 18-64 years, mixed 995.6
FF:10155-103A2 76 years, female 631.3
FF:10174-103C3 60 years, female 581.9
Pons
Scaled Tags Per Million: 865.6
FF:10033-101E6 18-54 years, mixed 865.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 556.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 511.6
Samples: 4

Max nTPM: 561.1
Min nTPM: 473.4
Sample A Female 473.4
Sample B Female 504.8
Sample C Male 561.1
Sample D Male 507.1
Pons
nTPM: 556.0
Samples: 4

Max nTPM: 649.4
Min nTPM: 449.6
Sample A Female 649.4
Sample B Female 449.6
Sample C Male 545.3
Sample D Male 579.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 678.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 678.4
Samples: 4

Max nTPM: 746.3
Min nTPM: 626.0
Sample A Male 746.3
Sample B Male 644.9
Sample C Female 696.4
Sample D Female 626.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 19.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 18.6
67936204 Antisense, RP_041102_01_B02, Mouse strain C57BL/6J (56 days, male) 18.9
308055136 Antisense, RP_140710_01_A05, Mouse strain C57BL/6J (56 days, male) 18.4
Pons
Expression energy: 19.0
308055136 Antisense, RP_140710_01_A05, Mouse strain C57BL/6J (56 days, male) 19.0
67936204 Antisense, RP_041102_01_B02, Mouse strain C57BL/6J (56 days, male) 18.9

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