We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EEF2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • EEF2
CANCER STOMACH CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
STAD TCGA PROTEIN EXPRESSION
ANTIBODIES
AND
VALIDATION
Dictionary
Stomach cancer
Human cancer
Stomach adenocarcinoma
STOMACH ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

EEF2 is not prognostic in Stomach Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 881.3
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 1130.4
Number of samples 346
Samples
Sample Description pTPM
TCGA-BR-8361-01A 71 years, female, white, stage:Stage IIIC, alive, 946 days 3555.1
TCGA-CD-8528-01A 43 years, female, asian, stage:Stage IIIA, alive, 375 days 3178.1
TCGA-HU-8602-01A 58 years, female, asian, stage:Stage IIB, alive, 679 days 2576.6
TCGA-BR-7957-01A 50 years, female, white, stage:Stage IV, dead, 276 days 2572.4
TCGA-CG-5726-01A 73 years, male, stage:Stage IA, dead, 881 days 2568.3
TCGA-D7-8575-01A 75 years, male, white, stage:Stage IIIA, dead, 554 days 2562.2
TCGA-F1-6874-01A 79 years, male, white, stage:Stage IB, alive, 440 days 2560.7
TCGA-BR-8380-01A 55 years, male, white, stage:Stage IIIC, dead, 21 days 2555.6
TCGA-VQ-A92D-01A 67 years, male, white, stage:Stage IB, alive, 2032 days 2540.9
TCGA-BR-8367-01A 55 years, male, white, stage:Stage IIIB, dead, 801 days 2380.5
TCGA-BR-6705-01A 68 years, female, white, stage:Stage IIIB, dead, 779 days 2359.7
TCGA-BR-7851-01A 74 years, male, white, stage:Stage IIB, dead, 574 days 2353.4
TCGA-VQ-A928-01A 49 years, male, white, stage:Stage IV, dead, 174 days 2340.1
TCGA-VQ-A94T-01A 73 years, male, stage:Stage IIIB, dead, 342 days 2326.5
TCGA-HF-A5NB-01A 75 years, female, stage:Stage IIIC, alive, 928 days 2312.6
TCGA-BR-6455-01A 59 years, male, white, stage:Stage IIB, dead, 422 days 2251.7
TCGA-CD-8531-01A 66 years, female, asian, stage:Stage IIIA, alive, 383 days 2248.4
TCGA-VQ-A8PP-01A 76 years, male, stage:Stage IV, dead, 712 days 2172.5
TCGA-BR-7959-01A 59 years, male, white, stage:Stage IIIA, alive, 1010 days 2104.2
TCGA-HJ-7597-01A 71 years, female, white, stage:Stage IB, dead, 805 days 2098.3
TCGA-CD-5803-01A 78 years, female, asian, stage:Stage II, dead, 341 days 2098.1
TCGA-FP-8209-01A 49 years, male, white, stage:Stage IB, dead, 1811 days 2095.6
TCGA-CG-5722-01A 67 years, female, stage:Stage IV, alive, 30 days 2037.9
TCGA-D7-A6EX-01A 72 years, female, white, stage:Stage IIIA, alive, 344 days 2007.7
TCGA-D7-8572-01A 57 years, male, white, stage:Stage IIB, alive, 511 days 1993.5
TCGA-VQ-A94R-01A 63 years, male, white, stage:'--, dead, 1294 days 1931.1
TCGA-D7-6528-01A 70 years, female, white, stage:Stage IB, alive, 463 days 1916.1
TCGA-BR-8680-01A 45 years, male, asian, stage:Stage IV, alive, 972 days 1896.1
TCGA-HF-7133-01A female, stage:Stage IV, alive, 1918 days 1889.1
TCGA-HF-7132-01A male, stage:Stage II, alive, 2351 days 1881.0
TCGA-BR-8372-01A 63 years, male, white, stage:Stage IIIC, alive, 951 days 1875.2
TCGA-VQ-A8E3-01A 79 years, male, white, stage:Stage IIA, dead, 661 days 1873.9
TCGA-BR-8059-01A 72 years, male, white, stage:Stage III, dead, 439 days 1871.6
TCGA-BR-6457-01A 69 years, male, white, stage:Stage IIA, alive, 416 days 1816.6
TCGA-BR-8384-01A 69 years, male, white, stage:Stage IIIC, alive, 113 days 1791.6
TCGA-BR-8371-01A 62 years, male, white, stage:Stage IIIB, dead, 359 days 1787.2
TCGA-BR-6456-01A 74 years, female, white, stage:Stage IIB, dead, 526 days 1781.3
TCGA-VQ-AA69-01A 35 years, male, white, stage:Stage IIIA, alive, 864 days 1773.9
TCGA-BR-8368-01A 84 years, female, white, stage:Stage IB, alive, 131 days 1762.8
TCGA-HU-8604-01A 82 years, female, asian, stage:Stage IIA, alive, 694 days 1741.8
TCGA-BR-6564-01A 46 years, female, white, stage:Stage IIIA, dead, 794 days 1734.0
TCGA-CG-5720-01A 71 years, male, stage:Stage IB, dead, 30 days 1732.4
TCGA-D7-6519-01A 64 years, female, white, stage:'--, alive, 625 days 1715.9
TCGA-BR-6452-01A 78 years, female, white, stage:Stage IIA, alive, 1055 days 1675.6
TCGA-MX-A5UG-01A 78 years, male, asian, stage:Stage IIIA, dead, 113 days 1675.1
TCGA-HU-A4G9-01A 67 years, female, asian, stage:Stage IA, alive, 736 days 1675.1
TCGA-D7-6524-01A 53 years, male, white, stage:Stage II, alive, 543 days 1673.0
TCGA-BR-8365-01A 70 years, female, white, stage:Stage IIA, dead, 533 days 1669.1
TCGA-D7-A4YX-01A 63 years, male, white, stage:Stage IIB, alive, 1108 days 1662.8
TCGA-D7-8573-01A 57 years, male, white, stage:Stage IIA, alive, 593 days 1638.9
TCGA-VQ-A91N-01A 59 years, female, stage:Stage IV, dead, 570 days 1633.1
TCGA-BR-A4QL-01A 75 years, female, white, stage:Stage IIIB, dead, 491 days 1625.0
TCGA-HF-7134-01A male, stage:Stage IA, alive, 1588 days 1622.7
TCGA-FP-7829-01A 69 years, male, white, stage:Stage IIB, alive, 594 days 1621.7
TCGA-D7-8574-01A 72 years, male, white, stage:Stage IIIA, alive, 523 days 1616.6
TCGA-HU-8608-01A 70 years, male, asian, stage:Stage IIIB, alive, 641 days 1611.2
TCGA-FP-8210-01A 48 years, male, asian, stage:Stage IIIA, dead, 153 days 1611.0
TCGA-BR-8591-01A 79 years, male, white, stage:Stage IIIC, alive, 856 days 1607.2
TCGA-BR-8058-01A 53 years, female, white, stage:Stage IIIB, alive, 1133 days 1580.7
TCGA-BR-4280-01A 78 years, female, white, stage:Stage III, dead, 201 days 1574.7
TCGA-CG-5721-01A 58 years, male, stage:Stage IV, alive, 183 days 1574.6
TCGA-BR-8676-01A 59 years, male, white, stage:Stage IIIB, alive, 229 days 1573.7
TCGA-D7-6522-01A 58 years, male, white, stage:Stage IB, alive, 566 days 1567.0
TCGA-BR-8682-01A 52 years, male, asian, stage:Stage IIB, alive, 991 days 1566.6
TCGA-BR-8284-01A 72 years, female, white, stage:Stage IIIC, dead, 245 days 1563.1
TCGA-VQ-A8PQ-01A 50 years, female, white, stage:Stage IV, dead, 476 days 1557.2
TCGA-VQ-A8P2-01A 68 years, male, white, stage:Stage IIIA, alive, 1160 days 1553.7
TCGA-BR-6458-01A 57 years, female, white, stage:Stage IIB, dead, 588 days 1548.5
TCGA-VQ-AA6F-01A 57 years, male, white, stage:Stage IIB, alive, 1646 days 1546.0
TCGA-CG-4441-01A 83 years, male, stage:Stage IIIA, dead, 426 days 1542.0
TCGA-BR-8364-01A 42 years, female, white, stage:Stage IIIC, alive, 675 days 1536.2
TCGA-BR-7707-01A 69 years, female, white, stage:Stage IB, alive, 1090 days 1525.9
TCGA-VQ-A8E2-01A 57 years, male, asian, stage:Stage IIIB, alive, 1319 days 1524.5
TCGA-IN-7806-01A 50 years, male, white, stage:Stage IIB, alive, 1106 days 1508.1
TCGA-HU-8249-01A 76 years, male, asian, stage:Stage IIIA, alive, 881 days 1504.0
TCGA-CG-4437-01A 83 years, male, stage:Stage II, alive, 245 days 1493.6
TCGA-D7-8579-01A 66 years, female, white, stage:Stage IIB, alive, 636 days 1488.6
TCGA-D7-8576-01A 54 years, female, white, stage:Stage IIIB, dead, 446 days 1475.4
TCGA-BR-8592-01A 63 years, female, white, stage:Stage IIIB, dead, 191 days 1472.8
TCGA-B7-5818-01A 62 years, male, white, stage:Stage IB, alive, 356 days 1464.6
TCGA-HU-A4G3-01A 54 years, male, asian, stage:Stage IIB, alive, 170 days 1457.0
TCGA-CD-8533-01A 48 years, male, asian, stage:Stage II, alive, 468 days 1447.1
TCGA-BR-8289-01A 57 years, male, white, stage:Stage IV, dead, 81 days 1442.4
TCGA-BR-8369-01A 76 years, female, white, stage:Stage IIIB, alive, 427 days 1435.2
TCGA-VQ-A91K-01A 69 years, male, white, stage:Stage IIIA, alive, 1862 days 1430.2
TCGA-VQ-A91A-01A 67 years, male, white, stage:Stage IIIB, alive, 1200 days 1417.4
TCGA-BR-6803-01A 54 years, female, white, stage:Stage IIA, alive, 949 days 1406.8
TCGA-BR-8687-01A 67 years, female, white, stage:Stage IIIC, dead, 250 days 1405.6
TCGA-VQ-A91Z-01A 67 years, female, white, stage:Stage IIIA, alive, 1690 days 1399.1
TCGA-VQ-A8DU-01A 63 years, male, white, stage:Stage IIIA, dead, 166 days 1394.5
TCGA-BR-8081-01A 71 years, female, white, stage:Stage IIB, alive, 981 days 1382.3
TCGA-FP-7998-01A 77 years, male, white, stage:Stage IIIC, alive, 678 days 1379.3
TCGA-HU-8244-01A 77 years, female, asian, stage:Stage IA, alive, 742 days 1378.0
TCGA-BR-8590-01A 62 years, male, white, stage:Stage IIIC, dead, 284 days 1354.0
TCGA-CG-5719-01A 54 years, female, stage:Stage IV, alive, 31 days 1345.8
TCGA-CG-5724-01A 59 years, male, stage:Stage IV, dead, 366 days 1343.8
TCGA-VQ-A91Q-01A 61 years, male, stage:Stage IV, dead, 633 days 1332.0
TCGA-D7-6525-01A 58 years, male, white, stage:Stage IIIA, dead, 406 days 1328.0
TCGA-VQ-A8PO-01A 74 years, male, white, stage:Stage IIB, dead, 282 days 1326.6
TCGA-VQ-A91S-01A 63 years, male, black or african american, stage:Stage IIIB, alive, 1000 days 1306.5
TCGA-BR-A4IV-01A 47 years, male, asian, stage:Stage IIIB, dead, 869 days 1303.5
TCGA-VQ-A924-01A 69 years, male, stage:Stage II, dead, 1686 days 1297.2
TCGA-VQ-A8PU-01A 72 years, female, white, stage:Stage IIIA, dead, 832 days 1295.9
TCGA-BR-8589-01A 56 years, male, white, stage:Stage IIIB, alive, 825 days 1295.6
TCGA-BR-6566-01A 64 years, female, white, stage:Stage IIA, alive, 997 days 1288.3
TCGA-D7-6527-01A 62 years, male, white, stage:Stage II, dead, 312 days 1280.4
TCGA-BR-8683-01A 75 years, male, asian, stage:Stage IIIB, dead, 300 days 1275.7
TCGA-BR-7715-01A 65 years, male, white, stage:Stage IIA, alive, 1023 days 1272.0
TCGA-RD-A8NB-01A 80 years, female, white, stage:Stage IIIA, dead, 513 days 1266.3
TCGA-BR-8485-01A 68 years, female, white, stage:Stage IIIC, alive, 280 days 1261.1
TCGA-BR-6453-01A 54 years, male, white, stage:Stage IIA, alive, 485 days 1260.9
TCGA-BR-A4J9-01A 55 years, male, white, stage:Stage IIA, alive, 14 days 1257.7
TCGA-BR-7196-01A 64 years, male, white, stage:Stage IV, alive, 666 days 1255.0
TCGA-CD-5813-01A 60 years, male, asian, stage:Stage II, dead, 377 days 1248.9
TCGA-VQ-A8PC-01A 65 years, male, white, stage:Stage IIIA, dead, 1407 days 1248.2
TCGA-BR-8678-01A 76 years, male, white, stage:Stage IB, alive, 754 days 1245.4
TCGA-BR-4267-01A 51 years, male, white, stage:Stage IB, dead, 188 days 1244.7
TCGA-KB-A93G-01A 68 years, male, white, stage:Stage IB, alive, 613 days 1237.3
TCGA-BR-8677-01A 74 years, female, white, stage:Stage IIIB, alive, 813 days 1233.6
TCGA-CD-8532-01A 52 years, male, asian, stage:Stage II, dead, 354 days 1233.3
TCGA-IN-AB1X-01A 78 years, female, white, stage:Stage IIA, alive, 411 days 1232.0
TCGA-HU-A4GT-01A 71 years, female, asian, stage:Stage IIA, alive, 198 days 1227.7
TCGA-VQ-A94P-01A 57 years, male, white, stage:'--, dead, 81 days 1211.5
TCGA-D7-6822-01A 77 years, male, white, stage:Stage IB, alive, 375 days 1199.8
TCGA-BR-6852-01A 64 years, female, white, stage:Stage IIA, alive, 1367 days 1195.8
TCGA-D7-6521-01A 65 years, male, white, stage:'--, alive, 564 days 1182.7
TCGA-BR-7723-01A 59 years, male, white, stage:Stage IIIB, dead, 874 days 1182.1
TCGA-BR-8297-01A 58 years, male, white, stage:Stage IIIC, alive, 225 days 1178.0
TCGA-IN-8663-01A 68 years, male, white, stage:Stage IIB, dead, 103 days 1165.2
TCGA-BR-7717-01A 63 years, male, white, stage:Stage IV, dead, 552 days 1161.9
TCGA-ZA-A8F6-01A 71 years, male, white, stage:Stage IB, alive, 525 days 1158.5
TCGA-MX-A5UJ-01A 86 years, female, white, stage:Stage IIIA, alive, 600 days 1155.8
TCGA-RD-A8N5-01A 78 years, male, white, stage:Stage IIIA, dead, 1747 days 1150.3
TCGA-BR-8291-01A 61 years, male, white, stage:Stage IIB, dead, 607 days 1149.8
TCGA-RD-A8N1-01A 70 years, male, white, stage:Stage IIIB, alive, 3519 days 1142.6
TCGA-CD-5798-01A 82 years, male, asian, stage:Stage II, alive, 408 days 1134.3
TCGA-BR-8381-01A 51 years, male, white, stage:Stage IIB, alive, 224 days 1134.3
TCGA-FP-8099-01A 79 years, male, white, stage:Stage IIA, alive, 519 days 1132.6
TCGA-VQ-A8PX-01A 51 years, male, stage:Stage IA, alive, 1964 days 1128.4
TCGA-HU-A4GQ-01A 71 years, male, asian, stage:Stage IIIC, dead, 3 days 1123.9
TCGA-CD-8534-01A 41 years, male, asian, stage:Stage II, alive, 367 days 1118.0
TCGA-VQ-A922-01A 70 years, male, stage:Stage IV, dead, 275 days 1111.3
TCGA-CG-5717-01A 58 years, male, stage:Stage II, dead, 212 days 1110.6
TCGA-HU-A4GU-01A 73 years, male, asian, stage:Stage IIB, alive, 200 days 1110.2
TCGA-HU-8610-01A 75 years, male, asian, stage:Stage IA, alive, 23 days 1101.0
TCGA-BR-8484-01A 61 years, male, white, stage:Stage IIIA, dead, 766 days 1093.7
TCGA-VQ-A925-01A 66 years, male, white, stage:Stage IIIA, dead, 138 days 1092.9
TCGA-BR-6707-01A 75 years, male, white, stage:Stage IIA, dead, 605 days 1092.1
TCGA-BR-6563-01A 60 years, male, white, stage:Stage IIB, alive, 1190 days 1089.8
TCGA-HU-A4G8-01A 71 years, female, asian, stage:Stage IIB, alive, 690 days 1088.2
TCGA-D7-6818-01A 53 years, male, white, stage:Stage IIIA, dead, 376 days 1082.0
TCGA-CD-8535-01A 59 years, male, asian, stage:Stage IIIA, alive, 390 days 1077.5
TCGA-BR-A4PF-01A 72 years, male, white, stage:Stage IIIB, alive, 35 days 1076.6
TCGA-CD-5801-01A 69 years, male, asian, stage:Stage IIIA, dead, 401 days 1075.2
TCGA-VQ-A8PD-01A 69 years, male, white, stage:Stage IIIC, dead, 496 days 1068.8
TCGA-BR-8686-01A 69 years, male, asian, stage:Stage IIIB, dead, 635 days 1063.8
TCGA-HU-A4H5-01A 71 years, male, asian, stage:Stage IB, alive, 724 days 1061.6
TCGA-D7-5578-01A 80 years, male, white, stage:Stage IIIA, alive, 385 days 1060.8
TCGA-VQ-A8PB-01A 65 years, female, white, stage:Stage II, dead, 1043 days 1052.4
TCGA-VQ-A8PE-01A 78 years, male, white, stage:Stage IIIB, dead, 675 days 1051.9
TCGA-D7-A6EY-01A 72 years, female, white, stage:Stage IIIB, dead, 348 days 1050.2
TCGA-MX-A663-01A 66 years, male, white, stage:Stage IIA, dead, 300 days 1045.4
TCGA-D7-A4YU-01A 73 years, male, white, stage:Stage IIIB, alive, 500 days 1039.9
TCGA-RD-A7C1-01A 82 years, male, white, stage:Stage IB, dead, 507 days 1029.4
TCGA-VQ-AA6J-01A 75 years, male, black or african american, stage:Stage IIIB, alive, 838 days 1028.4
TCGA-D7-A74A-01A 61 years, female, white, stage:Stage IIIA, alive, 607 days 1018.7
TCGA-RD-A8N6-01A 78 years, female, white, stage:Stage IIIA, dead, 272 days 1016.7
TCGA-MX-A666-01A 61 years, male, white, stage:Stage IIA, alive, 427 days 1015.4
TCGA-BR-8690-01A 54 years, female, white, stage:Stage IIIB, alive, 325 days 1013.4
TCGA-CD-8530-01A 51 years, male, asian, stage:Stage II, alive, 377 days 1007.1
TCGA-VQ-A8PF-01A 76 years, male, stage:Stage IIIB, dead, 76 days 1005.3
TCGA-BR-8060-01A 75 years, female, white, stage:Stage IIB, dead, 348 days 1001.6
TCGA-CD-A4MG-01A 76 years, male, asian, stage:Stage IIA, dead, 200 days 1001.3
TCGA-BR-4257-01A 79 years, female, white, stage:'--, dead, 294 days 999.1
TCGA-BR-8382-01A 67 years, female, white, stage:Stage IIIC, dead, 762 days 995.4
TCGA-IN-AB1V-01A 63 years, male, white, stage:Stage IA, alive, 479 days 994.7
TCGA-RD-A8N4-01A 58 years, female, white, stage:Stage IIIA, alive, 2171 days 994.0
TCGA-BR-8080-01A 72 years, female, white, stage:Stage IIIC, dead, 292 days 993.9
TCGA-D7-A6EV-01A 71 years, female, white, stage:Stage IIB, alive, 342 days 992.1
TCGA-BR-4256-01A 80 years, male, white, stage:'--, dead, 284 days 990.7
TCGA-BR-8373-01A 65 years, female, white, stage:Stage IIIA, alive, 450 days 990.6
TCGA-D7-8578-01A 72 years, male, white, stage:Stage IB, alive, 643 days 987.0
TCGA-R5-A7ZF-01A 65 years, female, black or african american, stage:Stage IV, dead, 259 days 984.4
TCGA-HU-A4GF-01A 69 years, male, asian, stage:Stage IIA, alive, 785 days 981.7
TCGA-HU-A4G2-01A 45 years, male, asian, stage:Stage IIB, alive, 739 days 980.2
TCGA-F1-6875-01A 79 years, male, black or african american, stage:Stage IA, dead, 2197 days 970.3
TCGA-D7-A747-01A 57 years, male, white, stage:Stage IIB, dead, 255 days 967.5
TCGA-BR-6801-01A 70 years, male, white, stage:Stage IIA, alive, 1223 days 966.2
TCGA-R5-A7ZI-01A 44 years, female, white, stage:Stage IV, alive, 2267 days 955.0
TCGA-CD-8529-01A 65 years, male, asian, stage:Stage IV, alive, 374 days 954.7
TCGA-IN-7808-01A 59 years, male, white, stage:'--, dead, 105 days 954.3
TCGA-D7-6526-01A 67 years, female, white, stage:Stage IIIA, alive, 523 days 953.3
TCGA-BR-6802-01A 65 years, male, white, stage:Stage IIIA, alive, 940 days 947.8
TCGA-IN-A6RJ-01A 64 years, male, white, stage:Stage IA, alive, 379 days 941.6
TCGA-HU-A4H0-01A 72 years, male, asian, stage:Stage IIIC, alive, 64 days 939.1
TCGA-CG-4444-01A 76 years, male, stage:Stage IIIA, alive, 1431 days 937.6
TCGA-3M-AB46-01A 70 years, male, white, stage:Stage IB, alive, 1765 days 937.5
TCGA-BR-A4J6-01A 69 years, female, white, stage:Stage IIA, alive, 20 days 933.7
TCGA-BR-8487-01A 64 years, female, white, stage:Stage IIA, alive, 34 days 931.7
TCGA-VQ-A8P8-01A 72 years, female, black or african american, stage:Stage IIB, alive, 942 days 924.3
TCGA-BR-7958-01A 60 years, male, white, stage:Stage IIIB, alive, 899 days 922.2
TCGA-HU-A4GJ-01A 60 years, female, asian, stage:Stage IIIC, alive, 650 days 920.5
TCGA-CD-8526-01A 73 years, female, asian, stage:Stage IIIA, alive, 381 days 916.1
TCGA-VQ-A91E-01A 67 years, female, white, stage:Stage IIIB, alive, 664 days 915.2
TCGA-VQ-A94U-01A 70 years, male, white, stage:Stage IIB, alive, 819 days 912.9
TCGA-RD-A7BW-01A 68 years, female, white, stage:Stage IB, dead, 156 days 910.3
TCGA-CG-4305-01A 69 years, male, stage:Stage II, alive, 485 days 909.7
TCGA-F1-A72C-01A 68 years, male, asian, stage:Stage IIA, alive, 346 days 909.6
TCGA-BR-7716-01A 62 years, female, white, stage:Stage IIB, alive, 1210 days 909.1
TCGA-VQ-A8DV-01A 48 years, male, white, stage:Stage IB, dead, 403 days 905.6
TCGA-BR-A44U-01A 70 years, male, white, stage:Stage IIIB, dead, 422 days 904.3
TCGA-BR-8286-01A 49 years, male, white, stage:Stage II, alive, 895 days 904.0
TCGA-RD-A8N2-01A 59 years, female, white, stage:Stage IB, alive, 3540 days 903.6
TCGA-BR-8366-01A 80 years, female, white, stage:Stage IIA, alive, 29 days 900.4
TCGA-KB-A6F7-01A 54 years, female, stage:Stage IB, alive, 1935 days 899.6
TCGA-BR-A4J4-01A 39 years, male, asian, stage:Stage IIIB, alive, 16 days 895.4
TCGA-KB-A93H-01A 79 years, female, asian, stage:Stage IIB, alive, 1145 days 895.1
TCGA-IN-A7NU-01A 69 years, male, white, stage:Stage IIIB, alive, 356 days 894.4
TCGA-EQ-8122-01A 71 years, female, white, stage:Stage IIB, dead, 243 days 891.0
TCGA-VQ-AA6A-01A 56 years, male, white, stage:Stage IIIC, alive, 1184 days 884.1
TCGA-D7-6815-01A 70 years, female, white, stage:Stage IIB, alive, 486 days 883.8
TCGA-BR-7901-01A 74 years, male, white, stage:Stage IIB, dead, 105 days 878.7
TCGA-IP-7968-01A 74 years, male, white, stage:Stage IIIB, alive, 77 days 878.6
TCGA-BR-8588-01A 55 years, female, white, stage:Stage IIB, alive, 389 days 876.0
TCGA-BR-6709-01A 57 years, female, white, stage:Stage IIIB, dead, 370 days 874.4
TCGA-D7-5577-01A 53 years, female, white, stage:Stage IIIA, dead, 782 days 865.4
TCGA-BR-A4J8-01A 71 years, female, white, stage:Stage IIIB, alive, 411 days 861.1
TCGA-VQ-A8P3-01A 72 years, male, white, stage:Stage IIIA, alive, 1132 days 860.3
TCGA-CG-4469-01A 70 years, male, stage:Stage IV, dead, 215 days 858.7
TCGA-CD-5799-01A 45 years, male, asian, stage:Stage II, alive, 396 days 854.7
TCGA-BR-A4J7-01A 49 years, male, asian, stage:Stage IIB, alive, 989 days 847.4
TCGA-VQ-A8PH-01A 62 years, male, white, stage:Stage IIIB, dead, 389 days 845.1
TCGA-D7-A6EZ-01A 66 years, male, white, stage:Stage IIIA, dead, 618 days 843.0
TCGA-CG-4465-01A 69 years, female, stage:Stage IV, dead, 274 days 841.6
TCGA-HU-A4GY-01A 76 years, female, asian, stage:Stage IIIA, alive, 8 days 840.1
TCGA-VQ-A91Y-01A 67 years, male, white, stage:Stage IIIC, dead, 296 days 837.1
TCGA-VQ-AA64-01A 68 years, male, white, stage:Stage IIIB, dead, 560 days 825.5
TCGA-FP-A8CX-01A 60 years, male, white, stage:Stage IIIC, alive, 7 days 825.4
TCGA-B7-A5TN-01A 60 years, male, white, stage:Stage IIB, alive, 287 days 818.4
TCGA-HU-A4H3-01A 56 years, female, asian, stage:Stage IIIC, alive, 882 days 810.8
TCGA-BR-A44T-01A 53 years, female, white, stage:Stage IIA, alive, 1038 days 807.8
TCGA-VQ-AA68-01A 52 years, female, white, stage:Stage IIIC, alive, 1328 days 807.2
TCGA-CD-8524-01A 61 years, female, asian, stage:Stage II, alive, 388 days 805.6
TCGA-VQ-A8E0-01A 68 years, male, black or african american, stage:Stage IIIA, dead, 562 days 805.1
TCGA-VQ-AA6G-01A 68 years, male, white, stage:Stage IIA, dead, 792 days 804.2
TCGA-RD-A8N9-01A 63 years, female, asian, stage:Stage II, alive, 1083 days 801.1
TCGA-VQ-A8PM-01A 56 years, male, white, stage:Stage IV, dead, 57 days 799.6
TCGA-D7-8570-01A 44 years, male, white, stage:Stage IIIB, alive, 752 days 795.6
TCGA-BR-4201-01A 66 years, female, white, stage:'--, dead, 940 days 793.0
TCGA-HU-A4GD-01A 56 years, male, asian, stage:Stage IIB, alive, 692 days 792.6
TCGA-BR-8296-01A 58 years, female, white, stage:Stage IIIC, dead, 474 days 788.8
TCGA-BR-6565-01A 67 years, male, white, stage:Stage IIB, dead, 279 days 782.9
TCGA-ZQ-A9CR-01A 79 years, female, white, stage:Stage IIIC, dead, 24 days 775.2
TCGA-HU-A4HD-01A 73 years, male, asian, stage:Stage IIIA, alive, 1016 days 774.4
TCGA-BR-4253-01A 80 years, female, white, stage:Stage IIIA, dead, 124 days 774.3
TCGA-B7-A5TK-01A 51 years, male, white, stage:Stage IIIA, alive, 288 days 773.3
TCGA-HU-A4HB-01A 68 years, male, asian, stage:Stage IIB, dead, 477 days 771.8
TCGA-BR-8295-01A 60 years, female, white, stage:Stage IIB, dead, 67 days 770.9
TCGA-F1-A448-01A 70 years, male, white, stage:Stage IIIB, alive, 647 days 770.2
TCGA-FP-7916-01A 77 years, male, asian, stage:Stage IIIC, dead, 428 days 765.8
TCGA-FP-A9TM-01A 77 years, male, white, stage:'--, alive, 189 days 762.6
TCGA-CD-5800-01A 51 years, female, asian, stage:Stage II, alive, 400 days 758.6
TCGA-KB-A93J-01A 78 years, male, white, stage:Stage II, alive, 1124 days 755.4
TCGA-CG-4306-01A 90 years, male, stage:Stage IV, dead, 1 days 751.4
TCGA-SW-A7EB-01A 45 years, male, white, stage:Stage IIIA, alive, 176 days 744.0
TCGA-VQ-A927-01A 81 years, male, white, stage:Stage IIIB, dead, 200 days 743.2
TCGA-IN-A6RR-01A 84 years, male, white, stage:'--, dead, 205 days 740.3
TCGA-VQ-A8DT-01A 43 years, male, stage:Stage IIIB, alive, 1484 days 733.6
TCGA-BR-7722-01A 62 years, male, white, stage:Stage IIB, dead, 466 days 732.3
TCGA-SW-A7EA-01A 61 years, female, white, stage:Stage IB, alive, 579 days 727.9
TCGA-CG-5723-01A 83 years, male, stage:Stage II, alive, 2496 days 726.8
TCGA-HU-A4GP-01A 62 years, female, asian, stage:Stage IIA, alive, 273 days 722.9
TCGA-HU-A4GX-01A 70 years, female, asian, stage:Stage IIIC, alive, 616 days 722.3
TCGA-CG-5732-01A 66 years, male, stage:Stage IV, dead, 2100 days 721.7
TCGA-BR-4279-01A 43 years, male, white, stage:Stage II, dead, 291 days 718.8
TCGA-FP-8211-01A 62 years, male, white, stage:Stage IIB, alive, 413 days 715.9
TCGA-HU-8238-01A 56 years, male, asian, stage:'--, alive, 46 days 713.3
TCGA-BR-A4J5-01A 56 years, male, asian, stage:Stage IIIA, alive, 862 days 709.5
TCGA-HU-A4H4-01A 53 years, female, asian, stage:Stage IIB, alive, 725 days 706.0
TCGA-CG-5734-01A 68 years, male, stage:Stage IIIA, dead, 243 days 704.3
TCGA-B7-A5TI-01A 52 years, male, white, stage:Stage IIIC, alive, 595 days 701.3
TCGA-VQ-A94O-01A 74 years, male, black or african american, stage:Stage IIIC, dead, 640 days 696.8
TCGA-RD-A7BS-01A 46 years, male, white, stage:Stage IIIA, dead, 336 days 696.0
TCGA-CD-A487-01A 51 years, male, asian, stage:Stage IIB, alive, 374 days 693.3
TCGA-CD-A489-01A 58 years, male, asian, stage:Stage IIA, dead, 344 days 686.2
TCGA-BR-7704-01A 69 years, female, white, stage:Stage II, alive, 1072 days 686.0
TCGA-D7-A4Z0-01A 60 years, female, white, stage:Stage IIB, alive, 449 days 684.2
TCGA-D7-A748-01A 41 years, female, white, stage:Stage IV, dead, 132 days 682.1
TCGA-CG-5725-01A 72 years, male, stage:Stage IB, dead, 457 days 679.5
TCGA-VQ-A8PJ-01A 53 years, male, stage:Stage IV, dead, 82 days 678.9
TCGA-IN-A7NR-01A 64 years, female, white, stage:Stage IV, alive, 198 days 670.5
TCGA-BR-8077-01A 58 years, female, white, stage:Stage IIIB, alive, 21 days 661.8
TCGA-VQ-AA6K-01A 59 years, male, white, stage:Stage IIIC, dead, 378 days 655.0
TCGA-CD-A48C-01A 79 years, female, asian, stage:Stage IIB, dead, 353 days 653.1
TCGA-D7-6520-01A 53 years, male, white, stage:Stage IIIA, alive, 573 days 647.2
TCGA-B7-A5TJ-01A 74 years, male, white, stage:Stage IIB, alive, 335 days 645.7
TCGA-VQ-A8PK-01A 58 years, male, white, stage:Stage IIIB, dead, 543 days 639.8
TCGA-BR-4187-01A 56 years, male, white, stage:'--, dead, 141 days 631.4
TCGA-BR-8483-01A 59 years, male, white, stage:Stage IIIA, alive, 164 days 627.4
TCGA-VQ-A91U-01A 78 years, male, asian, stage:Stage IIIA, dead, 52 days 624.3
TCGA-HU-A4GC-01A 74 years, male, asian, stage:Stage IIIB, alive, 99 days 620.6
TCGA-CD-8527-01A 72 years, female, asian, stage:Stage II, dead, 218 days 609.0
TCGA-CG-4438-01A 56 years, male, stage:Stage IV, alive, 1645 days 608.6
TCGA-CG-4440-01A 68 years, female, stage:Stage IV, dead, 122 days 606.6
TCGA-RD-A8N0-01A 53 years, female, white, stage:Stage IIIB, alive, 1236 days 602.9
TCGA-VQ-A91V-01A 58 years, male, stage:Stage IIIA, alive, 1297 days 597.2
TCGA-FP-A4BF-01A 68 years, male, white, stage:Stage IIIA, dead, 168 days 594.8
TCGA-CD-A48A-01A 57 years, male, asian, stage:Stage IIA, alive, 378 days 588.9
TCGA-D7-A6F2-01A 62 years, male, white, stage:Stage IB, alive, 476 days 587.0
TCGA-VQ-A8P5-01A 67 years, male, white, stage:Stage IIA, dead, 235 days 582.6
TCGA-BR-4191-01A 72 years, male, white, stage:'--, dead, 558 days 582.6
TCGA-VQ-AA6D-01A 52 years, female, stage:Stage IIIA, alive, 521 days 581.6
TCGA-RD-A7BT-01A 66 years, male, native hawaiian or other pacific islander, stage:Stage IV, dead, 262 days 578.9
TCGA-IN-A7NT-01A 73 years, female, white, stage:Stage IIB, alive, 323 days 578.3
TCGA-D7-A6F0-01A 79 years, female, white, stage:Stage IB, alive, 678 days 578.0
TCGA-CG-4477-01A 58 years, female, stage:Stage IB, alive, 942 days 577.0
TCGA-BR-6710-01A 41 years, male, white, stage:Stage IB, alive, 273 days 576.0
TCGA-VQ-A8DZ-01A 70 years, male, black or african american, stage:Stage IV, dead, 396 days 574.8
TCGA-HU-A4H2-01A 58 years, female, asian, stage:Stage IIIB, alive, 394 days 571.5
TCGA-RD-A8MV-01A 56 years, male, white, stage:Stage IIIB, alive, 3720 days 560.7
TCGA-CG-4475-01A 76 years, male, stage:Stage IIB, alive, 699 days 552.3
TCGA-IN-A6RN-01A 72 years, female, white, stage:Stage IIA, alive, 594 days 551.8
TCGA-FP-7735-01A 77 years, male, black or african american, stage:Stage IB, dead, 106 days 549.1
TCGA-IN-A6RI-01A 45 years, male, white, stage:Stage I, alive, 559 days 548.7
TCGA-IN-A6RL-01A 84 years, male, white, stage:'--, dead, 406 days 545.2
TCGA-VQ-A91X-01A 74 years, male, white, stage:Stage IIIB, dead, 289 days 544.9
TCGA-BR-7197-01A 69 years, male, white, stage:Stage II, alive, 280 days 541.8
TCGA-R5-A7O7-01A 51 years, male, white, stage:Stage IV, alive, 1389 days 526.2
TCGA-IN-8462-01A 80 years, male, white, stage:Stage IIB, alive, 572 days 524.0
TCGA-CD-8525-01A 82 years, female, asian, stage:Stage IIIA, alive, 383 days 522.2
TCGA-IN-A6RS-01A 76 years, male, white, stage:Stage IA, alive, 383 days 516.4
TCGA-FP-8631-01A 68 years, male, white, stage:Stage IIIA, alive, 17 days 494.5
TCGA-CD-A4MH-01A 86 years, female, asian, stage:Stage IIA, alive, 371 days 493.9
TCGA-HU-A4H6-01A 72 years, female, asian, stage:Stage IIIA, alive, 644 days 492.7
TCGA-CG-4460-01A 66 years, female, stage:Stage IV, dead, 669 days 488.4
TCGA-CG-4301-01A 75 years, female, stage:Stage IV, alive, 92 days 485.5
TCGA-RD-A8MW-01A 72 years, male, white, stage:Stage IIIB, dead, 1153 days 454.4
TCGA-CG-4466-01A 81 years, female, stage:Stage IB, alive, 577 days 444.9
TCGA-CG-5718-01A 78 years, female, stage:Stage II, dead, 1095 days 438.0
TCGA-R5-A7ZR-01A 70 years, female, black or african american, stage:Stage III, dead, 185 days 398.2
TCGA-CD-A486-01A 68 years, male, asian, stage:Stage IIA, dead, 192 days 394.6
TCGA-R5-A805-01A 71 years, male, white, stage:Stage IIIB, dead, 281 days 386.0
TCGA-BR-A4CS-01A 77 years, male, white, stage:Stage IIIC, dead, 45 days 385.0
TCGA-HU-A4GH-01A 75 years, male, asian, stage:Stage IA, alive, 358 days 359.6
TCGA-CG-4436-01A 57 years, male, stage:Stage IB, alive, 243 days 288.3
TCGA-CG-4443-01A 68 years, male, stage:Stage IA, alive, 912 days 211.8
Show allShow less
STOMACH CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA040534

Antibody HPA057351

Antibody CAB007795
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org