We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
UBXN6
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • UBXN6
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:113.8 nTPM
HPA Brain:100.4 nTPM
GTEx:113.8 nTPM
FANTOM5:68.3 Scaled Tags Per Million
Pig:43.3 nTPM
Mouse:55.8 nTPM
Allen mouse:5.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040906Antibody HPA041313
Glial cells Not detectedLow
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 98.1
2290 Female, age 72, unknown 108.9
1781 Male, age 74, unknown 108.3
2846 Female, age 79, unknown 103.2
2289 Male, age 61, right hemisphere 102.6
1857 Female, age 85, left hemisphere 102.5
1854 Male, age 80, left hemisphere 93.0
2288 Male, age 75, left hemisphere 83.0
2481 Female, age 94, left hemisphere 82.9
Globus pallidus, externus
nTPM: 87.3
2646 Male, age 61, right hemisphere 94.7
2772 Female, age 79, unknown 92.6
2567 Female, age 72, unknown 89.1
1996 Male, age 80, right hemisphere 86.3
2395 Male, age 75, both hemispheres 73.9
Globus pallidus, internus
nTPM: 78.5
2287 Male, age 75, right hemisphere 86.9
2483 Female, age 94, right hemisphere 85.9
1818 Male, age 74, unknown 81.2
2037 Male, age 80, right hemisphere 76.3
2566 Female, age 72, unknown 75.9
2778 Female, age 91, both hemispheres 73.0
2111 Female, age 85, right hemisphere 70.5
Nucleus accumbens
nTPM: 93.7
1783 Male, age 74, unknown 116.9
1856 Female, age 91, right hemisphere 110.5
1806 Female, age 85, left hemisphere 100.0
2824 Male, age 61, right hemisphere 95.2
2698 Female, age 72, unknown 93.7
2286 Male, age 75, left hemisphere 89.1
2732 Male, age 80, right hemisphere 75.5
2391 Female, age 94, left hemisphere 68.8
Nucleus basalis of Meynert
nTPM: 87.1
2569 Male, age 61, both hemispheres 96.5
2821 Male, age 75, both hemispheres 86.9
2484 Female, age 94, left hemisphere 84.6
2393 Male, age 80, right hemisphere 80.5
Nucleus of the diagonal band
nTPM: 100.4
2775 Male, age 80, right hemisphere 114.9
1812 Female, age 91, both hemispheres 109.8
2195 Female, age 85, both hemispheres 100.0
2029 Male, age 61, right hemisphere 96.3
1979 Male, age 74, unknown 81.0
Putamen
nTPM: 97.5
2647 Male, age 75, left hemisphere 105.4
2466 Female, age 79, unknown 104.2
2489 Female, age 72, unknown 98.8
1829 Male, age 74, unknown 98.6
1838 Male, age 80, right hemisphere 97.4
1937 Female, age 91, right hemisphere 97.0
2482 Female, age 94, left hemisphere 81.1
Septal nuclei
nTPM: 95.5
1960 Male, age 74, unknown 121.0
2031 Female, age 72, unknown 107.3
2629 Female, age 94, right hemisphere 105.7
2059 Female, age 85, both hemispheres 101.4
2009 Female, age 91, both hemispheres 89.8
2394 Male, age 61, left hemisphere 72.9
2199 Male, age 80, right hemisphere 70.6
Stria terminalis, bed nucleus
nTPM: 94.0
1974 Female, age 91, both hemispheres 112.2
2486 Female, age 94, both hemispheres 91.6
2201 Male, age 74, unknown 78.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 101.7
Samples: 246

Max nTPM: 188.0
Min nTPM: 52.3
Std nTPM: 24.8
Median nTPM: 100.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 188.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 177.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 176.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 166.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 161.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 160.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 158.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 158.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 153.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 153.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 146.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 145.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 145.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 144.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 144.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 141.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 140.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 139.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 137.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 136.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 136.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 133.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 132.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 132.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 132.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 131.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 130.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 129.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 128.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 128.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 128.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 126.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 126.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 125.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 125.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 124.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 124.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 124.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 123.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 123.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 123.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 123.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 123.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 123.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 123.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 122.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 122.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 122.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 121.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 121.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 121.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 120.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 120.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 119.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 119.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 119.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 119.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 119.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 119.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 118.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 118.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 117.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 117.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 117.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 117.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 116.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 116.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 115.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 115.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 115.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 115.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 115.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 114.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 114.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 114.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 114.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 114.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 113.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 113.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 112.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 112.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 111.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 111.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 110.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 110.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 109.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 109.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 109.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 108.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 108.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 108.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 108.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 107.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 107.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 107.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 107.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 107.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 107.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 106.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 106.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 106.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 105.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 105.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 105.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 105.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 103.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 103.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 102.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 102.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 102.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 102.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 102.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 102.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 102.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 101.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 101.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 101.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 101.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 101.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 100.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 100.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 100.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 100.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 99.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 99.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 99.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 99.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 99.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 98.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 98.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 98.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 97.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 97.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 96.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 96.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 95.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 95.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 95.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 95.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 95.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 95.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 94.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 93.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 93.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 93.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 93.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 93.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 92.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 92.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 92.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 92.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 92.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 91.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 91.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 91.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 91.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 91.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 90.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 90.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 90.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 89.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 89.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 89.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 88.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 88.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 88.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 88.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 87.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 87.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 87.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 87.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 87.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 86.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 86.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 85.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 85.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 85.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 85.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 84.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 84.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 84.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 84.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 84.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 83.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 83.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 83.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 82.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 81.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 81.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 80.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 80.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 80.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 79.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 79.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 79.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 79.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 79.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 78.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 77.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 76.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 76.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 75.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 75.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 75.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 74.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 74.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 74.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 74.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 74.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 73.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 73.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 72.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 72.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 72.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 72.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 70.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 70.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 69.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 67.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 66.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 65.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 65.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 65.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 64.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 64.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 61.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 61.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 59.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 57.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 56.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 52.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 52.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 113.8
Samples: 246

Max nTPM: 187.3
Min nTPM: 42.4
Std nTPM: 24.6
Median nTPM: 114.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 187.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 176.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 172.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 169.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 169.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 168.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 166.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 166.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 159.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 158.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 157.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 155.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 154.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 154.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 154.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 152.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 152.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 152.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 150.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 150.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 148.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 147.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 145.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 145.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 145.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 145.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 144.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 144.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 143.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 141.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 140.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 140.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 139.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 138.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 138.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 138.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 137.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 137.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 137.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 137.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 135.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 135.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 134.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 134.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 133.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 132.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 132.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 132.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 132.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 131.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 131.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 131.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 131.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 130.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 130.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 129.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 129.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 129.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 129.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 129.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 129.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 128.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 128.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 128.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 128.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 128.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 127.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 127.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 126.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 126.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 125.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 125.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 125.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 125.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 124.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 124.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 124.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 124.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 124.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 124.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 123.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 123.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 123.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 123.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 122.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 122.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 122.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 122.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 122.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 121.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 121.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 121.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 121.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 120.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 120.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 120.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 120.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 120.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 120.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 119.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 119.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 119.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 119.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 118.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 118.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 118.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 118.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 118.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 118.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 118.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 118.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 117.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 117.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 117.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 117.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 116.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 116.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 116.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 116.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 116.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 115.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 115.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 114.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 114.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 114.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 114.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 114.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 113.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 113.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 113.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 113.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 112.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 112.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 112.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 112.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 112.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 110.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 110.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 110.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 110.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 110.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 109.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 108.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 108.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 107.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 107.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 107.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 106.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 106.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 106.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 106.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 105.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 105.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 105.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 104.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 104.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 104.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 103.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 103.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 102.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 102.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 102.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 102.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 102.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 102.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 102.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 102.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 101.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 101.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 101.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 101.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 101.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 100.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 100.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 100.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 100.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 99.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 99.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 99.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 99.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 99.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 99.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 98.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 98.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 98.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 97.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 97.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 97.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 97.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 96.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 96.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 96.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 96.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 96.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 96.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 95.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 95.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 95.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 94.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 93.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 92.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 92.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 92.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 91.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 91.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 91.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 90.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 89.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 89.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 89.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 88.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 88.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 88.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 86.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 86.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 86.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 86.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 85.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 84.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 84.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 83.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 83.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 82.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 82.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 82.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 82.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 81.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 80.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 79.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 79.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 79.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 77.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 75.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 75.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 73.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 69.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 67.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 65.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 64.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 62.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 59.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 55.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 55.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 54.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 51.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 42.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 107.1
Samples: 205

Max nTPM: 211.2
Min nTPM: 52.5
Std nTPM: 25.0
Median nTPM: 103.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 211.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 175.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 172.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 170.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 166.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 166.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 163.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 158.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 155.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 154.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 149.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 149.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 149.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 148.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 146.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 145.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 143.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 142.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 141.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 138.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 138.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 138.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 137.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 136.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 135.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 135.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 134.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 134.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 133.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 133.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 133.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 132.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 131.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 130.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 129.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 129.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 129.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 129.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 129.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 128.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 128.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 128.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 127.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 127.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 127.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 126.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 126.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 125.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 125.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 124.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 123.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 122.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 122.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 121.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 121.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 121.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 120.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 120.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 119.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 119.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 118.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 118.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 117.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 117.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 117.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 117.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 116.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 116.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 116.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 115.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 114.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 113.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 113.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 112.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 112.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 112.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 112.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 111.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 111.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 111.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 110.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 110.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 109.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 109.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 108.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 107.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 106.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 106.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 106.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 105.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 105.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 105.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 105.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 105.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 105.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 104.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 104.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 104.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 104.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 104.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 104.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 103.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 103.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 103.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 103.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 102.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 102.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 102.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 102.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 102.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 101.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 101.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 101.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 101.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 101.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 101.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 100.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 100.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 99.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 99.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 98.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 98.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 98.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 97.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 97.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 97.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 97.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 97.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 96.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 96.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 96.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 95.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 95.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 95.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 95.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 95.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 94.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 94.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 94.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 92.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 92.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 92.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 92.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 91.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 91.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 91.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 91.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 91.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 90.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 89.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 89.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 88.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 88.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 88.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 88.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 88.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 87.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 87.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 87.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 87.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 87.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 86.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 86.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 85.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 85.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 85.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 85.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 85.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 84.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 83.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 83.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 83.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 82.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 82.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 81.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 81.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 80.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 80.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 79.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 79.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 79.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 79.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 78.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 78.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 78.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 77.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 77.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 77.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 75.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 75.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 75.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 74.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 73.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 73.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 73.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 70.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 68.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 68.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 68.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 65.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 63.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 63.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 59.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 68.3
FF:10164-103B2 76 years, female 68.3
Nucleus accumbens
Scaled Tags Per Million: 26.9
FF:10037-101F1 23-56 years, mixed 26.9
Putamen
Scaled Tags Per Million: 57.4
FF:10176-103C5 60 years, female 57.4
Globus pallidus
Scaled Tags Per Million: 36.1
FF:10175-103C4 60 years, female 38.4
FF:10161-103A8 76 years, female 33.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.3
Pig sample Sample description nTPM
Caudate
nTPM: 37.2
Samples: 4

Max nTPM: 40.9
Min nTPM: 32.2
Sample A Female 35.0
Sample B Female 40.9
Sample C Male 40.5
Sample D Male 32.2
Putamen
nTPM: 43.3
Samples: 4

Max nTPM: 52.7
Min nTPM: 33.6
Sample A Female 43.2
Sample B Female 33.6
Sample C Male 52.7
Sample D Male 43.7
Septum
nTPM: 35.5
Samples: 4

Max nTPM: 38.9
Min nTPM: 30.9
Sample A Female 38.9
Sample B Female 34.7
Sample C Male 37.6
Sample D Male 30.9
Ventral pallidum
nTPM: 39.0
Samples: 4

Max nTPM: 45.1
Min nTPM: 32.3
Sample A Female 32.3
Sample B Female 40.0
Sample C Male 45.1
Sample D Male 38.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 55.8
Samples: 4

Max nTPM: 63.2
Min nTPM: 51.1
Sample A Male 54.3
Sample B Male 63.2
Sample C Female 51.1
Sample D Female 54.5
Septum
nTPM: 51.3
Samples: 4

Max nTPM: 55.9
Min nTPM: 39.6
Sample A Male 55.9
Sample B Male 55.4
Sample C Female 54.2
Sample D Female 39.6
Ventral forebrain
nTPM: 54.1
Samples: 4

Max nTPM: 64.5
Min nTPM: 47.4
Sample A Male 49.7
Sample B Male 54.7
Sample C Female 64.5
Sample D Female 47.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.9
69015440 Antisense, RP_050315_01_A04, Mouse strain C57BL/6J (56 days, male) 5.9
Pallidum
Expression energy: 4.2
69015440 Antisense, RP_050315_01_A04, Mouse strain C57BL/6J (56 days, male) 4.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org