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FAM234A
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:106.3 nTPM
HPA Brain:75.1 nTPM
GTEx:106.3 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Pig:21.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 69.6
2816 Male, age 47, midline 85.1
1981 Female, age 72, midline 72.1
2565 Male, age 75, midline 64.9
2048 Male, age 55, midline 63.6
2194 Female, age 79, both hemispheres 62.1
Cervical spinal cord, dorsal horn
nTPM: 74.4
2296 Male, age 66, both hemispheres 135.0
2173 Female, age 72, unknown 90.9
1877 Male, age 55, unknown 67.5
2069 Male, age 47, both hemispheres 64.7
2721 Male, age 90, both hemispheres 48.0
2297 Male, age 75, both hemispheres 40.5
Cervical spinal cord, ventral horn
nTPM: 75.1
2098 Female, age 72, unknown 96.7
2068 Male, age 55, unknown 78.1
2820 Female, age 79, both hemispheres 74.3
2480 Male, age 75, both hemispheres 71.3
2809 Male, age 90, both hemispheres 67.9
2295 Male, age 66, both hemispheres 62.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 106.3
Samples: 159

Max nTPM: 323.9
Min nTPM: 21.5
Std nTPM: 48.4
Median nTPM: 101.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 323.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 273.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 248.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 240.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 205.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 204.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 197.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 192.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 182.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 180.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 176.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 176.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 176.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 174.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 172.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 169.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 168.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 168.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 166.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 160.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 157.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 155.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 155.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 153.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 153.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 152.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 147.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 145.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 145.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 142.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 141.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 141.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 140.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 139.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 139.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 138.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 138.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 135.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 135.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 134.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 133.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 132.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 129.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 128.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 127.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 126.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 124.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 124.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 122.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 121.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 120.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 120.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 120.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 119.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 117.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 116.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 115.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 114.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 113.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 113.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 112.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 112.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 111.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 111.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 110.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 110.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 109.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 106.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 106.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 106.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 105.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 105.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 105.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 104.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 104.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 104.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 104.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 103.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 102.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 101.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 100.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 100.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 100.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 99.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 98.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 97.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 94.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 92.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 92.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 91.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 90.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 89.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 88.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 87.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 87.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 86.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 86.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 86.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 84.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 84.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 82.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 82.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 80.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 80.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 80.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 79.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 78.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 78.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 76.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 75.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 74.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 74.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 74.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 74.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 73.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 73.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 73.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 72.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 72.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 72.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 71.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 71.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 71.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 68.5
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 68.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 67.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 67.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 67.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 66.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 64.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 62.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 61.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 60.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 60.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 56.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 55.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 55.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 55.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 54.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 54.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 54.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 52.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 52.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 50.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 49.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 49.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 48.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 47.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 46.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 46.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 45.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 45.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 45.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 44.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 43.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 39.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 36.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 25.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 21.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 61.2
FF:10181-103D1 60 years, female 71.3
FF:10159-103A6 76 years, female 51.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 21.3
Samples: 4

Max nTPM: 33.3
Min nTPM: 13.0
Sample A Female 13.0
Sample B Female 21.5
Sample C Male 33.3
Sample D Male 17.4
Ventral spinal cord
nTPM: 15.8
Samples: 4

Max nTPM: 20.9
Min nTPM: 12.8
Sample A Female 14.8
Sample B Female 12.8
Sample C Male 20.9
Sample D Male 14.6

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