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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:50.7 nTPM
HPA Brain:39.2 nTPM
GTEx:50.7 nTPM
FANTOM5:44.7 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:34.6 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041746Antibody HPA043227
Glial cells LowLow
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 23.8
2481 Female, age 94, left hemisphere 34.5
2289 Male, age 61, right hemisphere 26.6
2288 Male, age 75, left hemisphere 23.4
2290 Female, age 72, unknown 23.1
1781 Male, age 74, unknown 22.4
1854 Male, age 80, left hemisphere 22.1
1857 Female, age 85, left hemisphere 21.4
2846 Female, age 79, unknown 17.2
Globus pallidus, externus
nTPM: 39.2
2772 Female, age 79, unknown 48.6
1996 Male, age 80, right hemisphere 45.2
2646 Male, age 61, right hemisphere 38.4
2567 Female, age 72, unknown 38.3
2395 Male, age 75, both hemispheres 25.4
Globus pallidus, internus
nTPM: 35.6
2778 Female, age 91, both hemispheres 41.0
2483 Female, age 94, right hemisphere 38.7
2037 Male, age 80, right hemisphere 37.3
1818 Male, age 74, unknown 34.8
2111 Female, age 85, right hemisphere 33.5
2566 Female, age 72, unknown 31.8
2287 Male, age 75, right hemisphere 31.7
Nucleus accumbens
nTPM: 21.7
2732 Male, age 80, right hemisphere 30.3
2286 Male, age 75, left hemisphere 24.1
2391 Female, age 94, left hemisphere 23.6
1806 Female, age 85, left hemisphere 22.5
1783 Male, age 74, unknown 21.5
2824 Male, age 61, right hemisphere 18.7
2698 Female, age 72, unknown 17.8
1856 Female, age 91, right hemisphere 15.3
Nucleus basalis of Meynert
nTPM: 25.6
2569 Male, age 61, both hemispheres 40.8
2484 Female, age 94, left hemisphere 26.1
2821 Male, age 75, both hemispheres 19.3
2393 Male, age 80, right hemisphere 16.3
Nucleus of the diagonal band
nTPM: 20.6
1979 Male, age 74, unknown 27.6
1812 Female, age 91, both hemispheres 20.3
2029 Male, age 61, right hemisphere 19.7
2775 Male, age 80, right hemisphere 19.1
2195 Female, age 85, both hemispheres 16.3
Putamen
nTPM: 20.7
2647 Male, age 75, left hemisphere 29.7
2482 Female, age 94, left hemisphere 25.3
1937 Female, age 91, right hemisphere 21.9
2466 Female, age 79, unknown 19.5
2489 Female, age 72, unknown 19.4
1829 Male, age 74, unknown 15.2
1838 Male, age 80, right hemisphere 14.0
Septal nuclei
nTPM: 23.0
2059 Female, age 85, both hemispheres 28.3
2394 Male, age 61, left hemisphere 25.5
2199 Male, age 80, right hemisphere 24.8
1960 Male, age 74, unknown 23.9
2031 Female, age 72, unknown 22.1
2009 Female, age 91, both hemispheres 20.9
2629 Female, age 94, right hemisphere 15.6
Stria terminalis, bed nucleus
nTPM: 21.1
1974 Female, age 91, both hemispheres 24.1
2201 Male, age 74, unknown 20.4
2486 Female, age 94, both hemispheres 18.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 46.7
Samples: 246

Max nTPM: 140.5
Min nTPM: 13.4
Std nTPM: 18.5
Median nTPM: 42.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 140.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 121.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 108.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 95.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 95.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 95.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 92.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 92.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 92.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 89.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 89.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 88.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 85.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 82.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 82.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 77.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 72.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 71.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 70.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 69.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 68.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 67.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 66.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 66.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 65.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 64.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 64.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 64.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 62.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 62.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 62.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 62.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 61.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 61.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 61.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 61.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 61.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 60.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 60.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 59.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 59.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 58.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 58.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 58.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 57.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 57.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 57.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 57.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 56.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 56.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 56.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 56.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 55.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 55.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 55.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 54.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 53.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 53.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 53.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 53.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 53.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 53.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 52.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 52.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 52.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 52.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 52.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 51.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 51.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 50.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 49.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 49.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 49.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 48.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 48.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 48.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 48.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 48.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 48.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 47.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 47.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 47.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 47.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 47.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 47.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 46.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 46.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 45.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 45.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 45.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 45.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 44.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 44.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 44.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 44.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 43.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 43.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 43.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 43.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 43.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 42.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 42.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 42.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 41.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 41.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 41.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 41.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 41.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 41.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 41.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 41.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 40.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 40.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 40.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 40.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 40.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 40.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 39.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 39.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 39.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 39.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 39.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 39.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 38.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 38.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 38.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 38.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 38.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 37.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 37.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 37.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 36.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 36.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 36.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 36.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 36.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 35.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 35.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 35.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 35.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 35.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 35.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 35.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 35.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 35.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 35.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 35.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 35.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 35.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 34.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 34.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 34.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 33.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 33.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 33.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 33.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 33.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 33.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 32.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 32.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 32.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 32.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 32.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 31.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 31.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 31.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 31.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 31.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 31.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 30.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 30.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 30.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 30.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 30.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 30.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 30.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 30.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 29.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 29.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 29.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 29.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 29.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 28.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 28.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 28.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 28.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 28.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 28.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 28.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 28.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 28.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 27.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 27.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 27.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 26.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 26.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 26.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 26.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 25.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 25.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 25.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 24.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 24.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 24.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 24.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 23.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 22.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 20.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 20.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 19.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 18.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 18.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 13.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 44.8
Samples: 246

Max nTPM: 166.8
Min nTPM: 16.8
Std nTPM: 21.1
Median nTPM: 39.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 166.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 131.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 111.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 108.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 106.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 103.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 97.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 97.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 95.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 93.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 93.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 90.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 86.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 84.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 83.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 79.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 77.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 74.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 74.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 73.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 73.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 73.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 72.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 71.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 71.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 70.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 70.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 68.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 68.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 65.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 65.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 65.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 64.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 64.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 64.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 64.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 63.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 62.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 61.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 60.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 60.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 59.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 59.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 58.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 58.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 58.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 58.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 58.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 58.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 57.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 56.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 56.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 55.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 55.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 55.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 54.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 53.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 53.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 53.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 52.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 51.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 51.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 50.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 49.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 49.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 49.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 49.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 49.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 48.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 47.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 47.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 47.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 47.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 47.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 47.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 46.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 46.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 46.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 46.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 45.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 45.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 45.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 44.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 44.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 44.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 43.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 43.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 42.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 42.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 42.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 42.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 42.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 42.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 42.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 42.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 41.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 41.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 41.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 41.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 41.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 41.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 40.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 40.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 40.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 40.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 40.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 40.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 40.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 39.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 39.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 39.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 39.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 39.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 39.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 39.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 38.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 38.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 38.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 38.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 38.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 38.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 38.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 38.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 38.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 37.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 37.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 37.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 37.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 37.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 36.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 36.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 36.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 36.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 36.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 35.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 35.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 35.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 35.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 34.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 34.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 34.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 34.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 34.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 34.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 34.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 33.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 33.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 33.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 33.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 33.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 33.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 33.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 33.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 33.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 32.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 32.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 32.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 32.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 32.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 31.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 31.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 31.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 31.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 31.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 31.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 31.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 31.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 31.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 31.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 30.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 30.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 30.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 29.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 29.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 29.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 29.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 29.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 29.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 28.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 28.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 28.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 28.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 28.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 28.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 28.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 27.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 27.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 27.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 27.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 27.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 27.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 27.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 27.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 27.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 27.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 26.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 26.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 26.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 26.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 26.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 26.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 26.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 26.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 25.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 25.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 25.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 25.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 25.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 24.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 24.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 24.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 24.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 24.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 24.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 23.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 23.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 23.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 23.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 23.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 22.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 22.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 22.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 21.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 21.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 21.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 20.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 19.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 19.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 18.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 16.8
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Brain - Putamen (basal ganglia)
Average nTPM: 50.7
Samples: 205

Max nTPM: 142.8
Min nTPM: 14.7
Std nTPM: 18.5
Median nTPM: 46.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 142.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 111.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 101.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 96.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 92.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 91.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 90.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 89.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 89.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 88.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 88.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 88.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 87.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 80.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 79.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 79.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 77.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 75.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 75.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 74.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 73.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 73.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 73.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 72.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 72.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 70.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 69.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 69.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 69.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 68.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 68.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 67.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 67.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 67.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 66.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 65.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 65.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 65.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 64.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 63.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 62.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 62.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 62.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 62.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 62.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 62.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 61.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 61.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 61.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 61.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 60.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 60.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 60.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 59.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 59.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 59.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 58.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 57.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 56.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 56.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 55.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 55.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 55.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 55.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 55.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 55.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 55.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 54.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 54.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 54.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 54.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 54.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 54.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 53.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 53.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 53.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 53.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 52.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 52.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 52.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 51.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 51.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 51.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 51.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 50.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 50.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 49.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 49.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 49.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 48.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 48.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 47.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 47.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 47.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 46.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 46.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 46.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 46.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 46.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 46.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 45.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 45.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 45.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 45.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 45.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 44.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 44.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 44.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 43.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 43.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 42.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 42.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 42.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 42.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 42.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 42.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 42.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 41.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 41.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 41.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 41.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 40.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 40.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 40.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 39.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 39.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 39.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 39.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 39.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 39.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 39.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 39.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 38.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 38.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 38.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 38.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 38.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 37.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 37.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 37.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 37.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 36.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 36.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 36.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 35.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 35.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 35.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 35.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 35.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 35.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 35.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 35.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 35.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 34.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 34.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 34.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 34.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 34.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 34.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 34.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 33.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 33.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 33.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 33.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 32.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 32.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 32.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 32.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 32.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 32.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 31.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 31.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 31.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 31.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 31.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 31.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 30.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 29.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 29.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 29.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 29.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 28.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 28.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 27.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 26.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 25.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 24.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 19.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 17.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 14.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

44.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 28.7
FF:10164-103B2 76 years, female 28.7
Nucleus accumbens
Scaled Tags Per Million: 24.9
FF:10037-101F1 23-56 years, mixed 24.9
Putamen
Scaled Tags Per Million: 22.4
FF:10176-103C5 60 years, female 22.4
Globus pallidus
Scaled Tags Per Million: 44.7
FF:10175-103C4 60 years, female 44.7
FF:10161-103A8 76 years, female 44.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.4
Pig sample Sample description nTPM
Caudate
nTPM: 29.5
Samples: 4

Max nTPM: 36.9
Min nTPM: 22.1
Sample A Female 24.5
Sample B Female 36.9
Sample C Male 34.6
Sample D Male 22.1
Putamen
nTPM: 33.5
Samples: 4

Max nTPM: 40.0
Min nTPM: 28.3
Sample A Female 36.1
Sample B Female 28.3
Sample C Male 40.0
Sample D Male 29.4
Septum
nTPM: 31.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 28.9
Sample A Female 32.7
Sample B Female 34.9
Sample C Male 31.2
Sample D Male 28.9
Ventral pallidum
nTPM: 29.9
Samples: 4

Max nTPM: 38.9
Min nTPM: 24.1
Sample A Female 25.8
Sample B Female 38.9
Sample C Male 30.9
Sample D Male 24.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 29.3
Samples: 4

Max nTPM: 32.4
Min nTPM: 26.4
Sample A Male 28.0
Sample B Male 30.5
Sample C Female 26.4
Sample D Female 32.4
Septum
nTPM: 34.6
Samples: 4

Max nTPM: 37.9
Min nTPM: 28.9
Sample A Male 28.9
Sample B Male 37.9
Sample C Female 36.1
Sample D Female 35.5
Ventral forebrain
nTPM: 28.1
Samples: 4

Max nTPM: 31.3
Min nTPM: 24.8
Sample A Male 26.8
Sample B Male 24.8
Sample C Female 31.3
Sample D Female 29.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
68498741 Antisense, RP_050113_02_D04, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
68498741 Antisense, RP_050113_02_D04, Mouse strain C57BL/6J (56 days, male) 0.0

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