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CASKIN1
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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

125.489
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:30.1 nTPM
HPA Brain:87.3 nTPM
GTEx:30.1 nTPM
Pig:25.6 nTPM
Mouse:29.7 nTPM
Allen mouse:4.7 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB079050
Hypothalamus mean intensity 125.489
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 34.753
Periventricular hypothalamic nucleus 116.602
Supraoptic nucleus -
Tuberal nucleus 112.952
Ventral tuberomammillary nucleus 80.583
Lateral preoptic area 69.346
Medial preoptic area 75.613
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus -
Anterior hypothalamic area, central -
Ventral medial hypothalamic nucleus 85.732
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 104.176
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 37.600
Dorsal medial hypothalamic nucleus 101.919
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 66.7
1961 Female, age 42, unknown 72.5
2226 Male, age 75, left hemisphere 60.9
Dorsomedial nucleus
nTPM: 87.3
1989 Male, age 62, unknown 126.7
2017 Female, age 42, unknown 72.6
2041 Female, age 72, unknown 62.6
Lateral hypothalamic area
nTPM: 74.3
2412 Male, age 62, unknown 90.2
1791 Male, age 80, right hemisphere 83.9
2271 Male, age 75, both hemispheres 65.0
2228 Male, age 66, unknown 58.3
Mammillary body
nTPM: 77.1
2413 Male, age 66, unknown 104.9
1923 Female, age 72, unknown 90.2
1834 Female, age 42, unknown 65.3
1948 Female, age 72, unknown 64.7
1945 Male, age 80, right hemisphere 60.6
Paraventricular nucleus
nTPM: 50.6
2700 Male, age 62, unknown 50.6
Preoptic area
nTPM: 76.6
1907 Male, age 80, right hemisphere 88.6
1861 Female, age 42, unknown 84.3
2414 Female, age 72, unknown 56.9
Supraoptic nucleus
nTPM: 45.4
2835 Female, age 72, unknown 68.6
1894 Female, age 72, unknown 39.5
2043 Male, age 62, unknown 28.2
Ventromedial nucleus
nTPM: 65.1
1982 Female, age 72, unknown 71.0
1822 Female, age 42, unknown 59.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 30.1
Samples: 202

Max nTPM: 75.0
Min nTPM: 2.3
Std nTPM: 12.9
Median nTPM: 29.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 75.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 65.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 60.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 58.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 57.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 56.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 55.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 55.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 55.1
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 52.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 52.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 52.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 51.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 51.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 51.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 49.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 48.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 48.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 48.0
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 47.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 47.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 47.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 45.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 45.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 44.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 44.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 44.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 44.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 44.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 43.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 43.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 43.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 42.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 42.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 42.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 42.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 41.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 41.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 40.9
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 40.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 40.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 40.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 40.5
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 39.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 39.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 39.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 39.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 39.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 39.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 39.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 39.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 38.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 38.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 38.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 38.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 38.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 38.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 37.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 37.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 36.9
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 36.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 36.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 36.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 36.3
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 36.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 36.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 35.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 35.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 35.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 35.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 34.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 34.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 34.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 34.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 33.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 33.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 33.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 33.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 33.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 32.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 32.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 32.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 32.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 31.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 31.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 31.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 31.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 31.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 31.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 30.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 30.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 30.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 30.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 29.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 29.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 29.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 29.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 29.6
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 29.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 29.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 29.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 29.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 29.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 28.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 28.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 28.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 28.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 28.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 28.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 27.8
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 27.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 27.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 27.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 27.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 26.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 26.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 26.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 26.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 26.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 26.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 26.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 26.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 25.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 25.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 25.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 25.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 25.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 25.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 25.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 24.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 24.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 24.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 24.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 23.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 23.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 23.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 22.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 22.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 22.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 22.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 22.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 22.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 22.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 21.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 21.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 21.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 21.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 21.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 20.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 20.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 20.5
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 20.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 20.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 20.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 20.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 19.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 19.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 19.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 19.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 19.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 18.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 18.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 18.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 18.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 18.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 18.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 17.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 17.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 17.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 17.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 16.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 16.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 15.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 15.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 14.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 14.5
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 14.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 13.7
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 13.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 13.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 13.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 13.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 12.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 12.3
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 12.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 11.9
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 11.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 10.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 10.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 9.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 9.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 9.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 7.9
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 6.0
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 5.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 5.4
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 4.4
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 3.6
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 2.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 25.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 20.8
Sample A Female 31.7
Sample B Female 27.6
Sample C Male 22.3
Sample D Male 20.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 29.7
Samples: 4

Max nTPM: 33.2
Min nTPM: 26.5
Sample A Male 32.4
Sample B Male 33.2
Sample C Female 26.8
Sample D Female 26.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.7
69288836 Antisense, RP_050407_01_G01, Mouse strain C57BL/6J (56 days, male) 4.7

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