We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ABCA3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ABCA3
TISSUE PRIMARY DATA CEREBELLUM Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Cerebellum
Tissue proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Low
Cells in molecular layer: High
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:39.2 nTPM
HPA Brain:59.8 nTPM
GTEx:39.2 nTPM
FANTOM5:104.7 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:13.7 nTPM
Allen mouse:4.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007884
Purkinje cells High
Cells in granular layer Low
Cells in molecular layer High



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.8
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 58.9
1769 Male, age 76, right hemisphere 68.6
1788 Male, age 55, unknown 68.5
2101 Male, age 74, right hemisphere 66.7
1768 Female, age 72, unknown 61.4
1774 Male, age 80, left hemisphere 56.6
2055 Female, age 91, right hemisphere 50.7
2003 Female, age 85, right hemisphere 50.4
2006 Male, age 61, right hemisphere 48.2
Cerebellar nuclei
nTPM: 53.2
2177 Female, age 85, both hemispheres 67.7
2318 Male, age 74, left hemisphere 57.2
2783 Female, age 72, unknown 55.3
2005 Male, age 80, left hemisphere 53.6
1966 Female, age 91, left hemisphere 52.9
1879 Male, age 55, unknown 52.2
1871 Male, age 74, unknown 51.1
2882 Male, age 76, left hemisphere 49.8
2175 Male, age 61, right hemisphere 38.6
Flocculonodular lobe
nTPM: 59.8
1767 Male, age 76, left hemisphere 72.7
2176 Female, age 91, right hemisphere 65.2
1792 Male, age 74, unknown 64.5
1771 Male, age 80, left hemisphere 61.9
1835 Female, age 85, right hemisphere 56.2
1765 Male, age 55, unknown 55.3
2004 Male, age 61, right hemisphere 42.4
Vermis
nTPM: 59.7
1770 Male, age 76, left hemisphere 74.9
1988 Female, age 85, left hemisphere 66.6
1751 Male, age 74, right hemisphere 66.4
1825 Male, age 74, unknown 59.9
1778 Female, age 91, left hemisphere 57.4
2834 Male, age 80, left hemisphere 54.8
2460 Male, age 61, both hemispheres 54.5
1928 Female, age 72, unknown 51.8
1766 Male, age 55, unknown 51.3

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 33.2
Samples: 215

Max nTPM: 50.0
Min nTPM: 19.4
Std nTPM: 5.2
Median nTPM: 33.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 50.0
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 50.0
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 49.1
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 48.4
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 45.5
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 45.3
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 45.3
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 43.8
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 43.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 42.9
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 42.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 40.7
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 40.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 40.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 40.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 40.3
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 40.3
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 40.1
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 39.9
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 39.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 39.2
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 39.1
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 39.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 38.9
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 38.9
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 38.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 38.7
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 38.6
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 38.3
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 38.3
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 38.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 38.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 38.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 37.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 37.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 37.7
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 37.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 37.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 37.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 37.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 37.0
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 37.0
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 36.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 36.7
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 36.7
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 36.7
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 36.6
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 36.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 36.4
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 36.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 36.1
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 36.0
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 36.0
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 36.0
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 35.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 35.9
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 35.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 35.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 35.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 35.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 35.6
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 35.5
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 35.4
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 35.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 35.2
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 35.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 35.1
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 35.0
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 34.9
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 34.9
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 34.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 34.9
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 34.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 34.9
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 34.8
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 34.8
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 34.8
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 34.8
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 34.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 34.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 34.7
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 34.6
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 34.4
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 34.4
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 34.3
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 34.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 34.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 34.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 34.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 34.2
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 34.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 34.0
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 33.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 33.9
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 33.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 33.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 33.6
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 33.5
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 33.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 33.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 33.5
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 33.5
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 33.5
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 33.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 33.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 33.3
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 33.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 33.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 33.2
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 33.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 33.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 33.1
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 33.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 33.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 32.9
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 32.9
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 32.9
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 32.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 32.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 32.7
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 32.7
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 32.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 32.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 32.5
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 32.5
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 32.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 32.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 32.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 32.2
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 32.2
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 32.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 31.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 31.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 31.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 31.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 31.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 31.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 31.6
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 31.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 31.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 31.4
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 31.3
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 31.1
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 31.0
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 31.0
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 31.0
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 30.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 30.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 30.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 30.6
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 30.5
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 30.5
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 30.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 30.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 30.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 30.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 30.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 30.1
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 30.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 30.0
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 29.9
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 29.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 29.8
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 29.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 29.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 29.6
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 29.6
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 29.5
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 29.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 29.3
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 29.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 29.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 29.2
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 29.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 29.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 29.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 29.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 29.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 28.9
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 28.9
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 28.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 28.7
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 28.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 28.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 28.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 28.2
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 28.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 28.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 27.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 27.4
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 27.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 27.3
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 27.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 26.9
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 26.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 26.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 26.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 26.0
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 25.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 24.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 24.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 24.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 24.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 24.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 24.6
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 24.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 23.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 23.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 23.1
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 22.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 22.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 22.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 20.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 20.7
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 19.4
Show allShow less
Brain - Cerebellum
Average nTPM: 39.2
Samples: 241

Max nTPM: 59.2
Min nTPM: 23.2
Std nTPM: 5.9
Median nTPM: 39.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 59.2
GTEX-WL46-2826-SM-3LK81 50-59 years, male 54.3
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 53.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 52.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 51.7
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 51.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 50.9
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 50.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 49.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 49.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 49.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 49.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 48.7
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 48.1
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 47.9
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 47.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 47.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 47.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 47.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 47.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 47.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 47.0
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 47.0
GTEX-13112-2926-SM-5DUWT 50-59 years, male 46.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 46.7
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 46.5
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 46.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 46.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 46.3
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 46.2
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 46.2
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 46.2
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 45.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 45.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 45.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 45.3
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 45.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 45.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 45.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 45.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 45.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 45.1
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 45.1
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 45.0
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 44.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 44.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 44.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 44.8
GTEX-14E6D-2926-SM-664OP 50-59 years, male 44.7
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 44.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 44.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 44.2
GTEX-14PN4-3026-SM-664O4 50-59 years, male 44.2
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 44.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 44.0
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 44.0
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 44.0
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 43.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 43.8
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 43.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 43.6
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 43.5
GTEX-11ONC-3026-SM-5985W 60-69 years, male 43.4
GTEX-17EVP-2926-SM-793BU 40-49 years, male 43.3
GTEX-11EI6-2926-SM-5985U 60-69 years, male 43.2
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 43.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 42.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 42.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 42.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 42.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 42.3
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 42.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 42.1
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 42.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 42.0
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 42.0
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 41.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 41.9
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 41.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 41.8
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 41.6
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 41.6
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 41.5
GTEX-11DYG-2926-SM-5H132 60-69 years, male 41.1
GTEX-1B933-3026-SM-731DB 50-59 years, female 41.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 40.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 40.9
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 40.8
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 40.8
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 40.8
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 40.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 40.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 40.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 40.5
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 40.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 40.2
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 40.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 40.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 40.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 40.0
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 40.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 39.9
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 39.8
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 39.7
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 39.7
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 39.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 39.6
GTEX-11NUK-3026-SM-5986K 50-59 years, male 39.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 39.5
GTEX-X261-3126-SM-4PQZC 50-59 years, male 39.5
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 39.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 39.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 39.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 39.4
GTEX-144GL-2926-SM-5O99F 50-59 years, male 39.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 39.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 39.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 39.3
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 39.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 39.2
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 39.2
GTEX-145LS-3026-SM-5O99S 60-69 years, female 39.1
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 39.0
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 38.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 38.7
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 38.6
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 38.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 38.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 38.4
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 38.3
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 38.3
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 38.3
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 38.3
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 38.3
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 38.2
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 38.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 38.0
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 38.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 38.0
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 37.9
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 37.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 37.8
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 37.8
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 37.7
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 37.6
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 37.6
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 37.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 37.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 37.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 37.4
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 37.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 37.3
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 37.3
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 37.3
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 37.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 37.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 37.2
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 37.2
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 37.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 36.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 36.8
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 36.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 36.5
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 36.5
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 36.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 36.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 36.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 36.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 36.3
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 36.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 36.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 36.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 36.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 36.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 36.0
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 36.0
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 35.8
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 35.4
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 35.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 35.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 35.2
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 35.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 35.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 35.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 35.0
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 34.9
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 34.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 34.7
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 34.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 34.7
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 34.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 34.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 34.3
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 34.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 34.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 34.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 33.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 33.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 33.7
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 33.5
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 33.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 33.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 33.2
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 33.1
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 33.0
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 33.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 32.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 32.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 32.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 32.7
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 32.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 32.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 32.5
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 32.5
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 32.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 32.2
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 32.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 32.1
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 32.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 32.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 31.9
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 31.6
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 31.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 31.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 30.9
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 30.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 29.0
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 28.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 28.8
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 28.8
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 28.2
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 27.9
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 27.8
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 27.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 27.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 27.4
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 27.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 27.4
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 27.0
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 24.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 23.2
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

104.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 104.7
FF:10083-102B2 22-68 years, mixed 106.0
FF:10166-103B4 76 years, female 103.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.4
Pig sample Sample description nTPM
Cerebellum
nTPM: 18.4
Samples: 4

Max nTPM: 29.5
Min nTPM: 13.9
Sample A Female 29.5
Sample B Female 15.6
Sample C Male 13.9
Sample D Male 14.5

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.7
Mouse sample Sample description nTPM
Cerebellum
nTPM: 13.7
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.1
Sample A Male 14.9
Sample B Male 12.1
Sample C Female 14.1
Sample D Female 13.5

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 4.1
69514536 Antisense, RP_050419_03_E12, Mouse strain C57BL/6J (56 days, male) 4.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org