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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:231.8 nTPM
HPA Brain:237.3 nTPM
GTEx:231.8 nTPM
FANTOM5:391.1 Scaled Tags Per Million
Pig:124.6 nTPM
Mouse:83.7 nTPM
Allen mouse:4.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042394
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

237.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 177.2
2290 Female, age 72, unknown 207.9
1857 Female, age 85, left hemisphere 203.0
1854 Male, age 80, left hemisphere 185.8
2289 Male, age 61, right hemisphere 177.3
2288 Male, age 75, left hemisphere 171.5
1781 Male, age 74, unknown 169.9
2846 Female, age 79, unknown 152.0
2481 Female, age 94, left hemisphere 150.4
Globus pallidus, externus
nTPM: 55.7
2772 Female, age 79, unknown 79.9
2395 Male, age 75, both hemispheres 67.2
2646 Male, age 61, right hemisphere 54.5
1996 Male, age 80, right hemisphere 49.3
2567 Female, age 72, unknown 27.5
Globus pallidus, internus
nTPM: 52.1
1818 Male, age 74, unknown 76.5
2483 Female, age 94, right hemisphere 75.7
2287 Male, age 75, right hemisphere 62.8
2037 Male, age 80, right hemisphere 53.6
2566 Female, age 72, unknown 36.1
2778 Female, age 91, both hemispheres 35.3
2111 Female, age 85, right hemisphere 24.5
Nucleus accumbens
nTPM: 192.5
1856 Female, age 91, right hemisphere 335.5
1783 Male, age 74, unknown 216.8
2824 Male, age 61, right hemisphere 210.3
2286 Male, age 75, left hemisphere 204.5
1806 Female, age 85, left hemisphere 202.0
2698 Female, age 72, unknown 156.6
2732 Male, age 80, right hemisphere 133.9
2391 Female, age 94, left hemisphere 80.2
Nucleus basalis of Meynert
nTPM: 100.7
2484 Female, age 94, left hemisphere 138.9
2393 Male, age 80, right hemisphere 103.5
2821 Male, age 75, both hemispheres 102.4
2569 Male, age 61, both hemispheres 58.1
Nucleus of the diagonal band
nTPM: 237.3
1812 Female, age 91, both hemispheres 299.2
2775 Male, age 80, right hemisphere 263.3
2195 Female, age 85, both hemispheres 221.6
1979 Male, age 74, unknown 207.4
2029 Male, age 61, right hemisphere 195.2
Putamen
nTPM: 158.7
1937 Female, age 91, right hemisphere 234.6
1838 Male, age 80, right hemisphere 190.5
2466 Female, age 79, unknown 182.3
2647 Male, age 75, left hemisphere 143.6
1829 Male, age 74, unknown 131.0
2489 Female, age 72, unknown 117.5
2482 Female, age 94, left hemisphere 111.5
Septal nuclei
nTPM: 201.8
1960 Male, age 74, unknown 274.8
2031 Female, age 72, unknown 262.4
2009 Female, age 91, both hemispheres 255.4
2629 Female, age 94, right hemisphere 184.9
2059 Female, age 85, both hemispheres 168.2
2394 Male, age 61, left hemisphere 144.3
2199 Male, age 80, right hemisphere 122.5
Stria terminalis, bed nucleus
nTPM: 224.3
1974 Female, age 91, both hemispheres 287.9
2486 Female, age 94, both hemispheres 198.6
2201 Male, age 74, unknown 186.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 195.8
Samples: 246

Max nTPM: 395.9
Min nTPM: 58.6
Std nTPM: 63.7
Median nTPM: 194.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 395.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 381.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 358.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 351.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 335.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 327.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 316.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 315.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 314.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 310.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 308.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 302.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 302.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 300.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 298.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 295.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 294.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 293.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 292.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 291.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 288.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 286.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 285.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 284.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 279.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 279.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 279.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 277.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 276.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 276.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 273.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 272.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 272.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 270.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 269.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 267.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 267.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 267.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 263.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 262.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 261.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 260.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 260.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 259.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 258.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 257.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 254.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 250.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 249.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 249.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 248.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 243.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 242.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 242.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 242.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 242.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 241.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 241.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 240.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 240.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 239.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 238.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 238.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 237.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 237.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 237.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 236.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 236.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 236.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 235.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 234.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 233.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 233.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 231.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 230.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 229.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 229.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 229.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 227.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 226.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 226.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 221.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 220.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 218.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 217.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 217.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 215.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 213.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 213.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 211.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 211.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 210.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 210.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 208.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 208.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 208.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 208.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 207.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 206.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 205.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 205.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 205.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 205.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 205.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 204.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 203.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 202.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 201.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 201.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 200.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 200.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 199.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 198.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 198.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 198.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 197.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 196.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 196.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 195.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 195.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 195.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 195.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 194.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 193.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 193.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 192.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 191.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 191.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 191.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 190.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 188.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 188.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 187.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 187.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 185.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 185.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 183.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 182.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 181.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 181.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 180.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 180.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 180.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 179.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 176.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 176.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 176.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 176.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 175.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 174.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 174.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 173.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 173.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 172.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 171.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 170.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 168.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 168.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 167.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 166.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 166.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 165.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 165.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 165.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 164.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 164.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 162.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 160.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 158.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 157.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 156.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 155.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 155.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 154.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 154.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 154.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 152.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 149.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 149.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 148.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 147.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 147.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 147.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 146.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 145.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 143.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 143.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 141.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 141.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 141.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 140.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 140.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 139.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 139.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 139.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 138.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 138.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 138.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 137.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 134.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 133.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 131.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 131.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 130.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 130.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 128.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 128.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 126.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 125.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 124.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 124.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 123.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 123.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 122.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 122.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 119.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 119.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 118.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 118.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 117.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 116.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 115.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 115.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 114.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 110.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 108.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 105.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 105.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 104.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 104.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 102.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 100.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 100.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 100.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 96.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 96.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 92.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 86.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 86.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 78.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 71.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 65.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 63.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 58.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 231.8
Samples: 246

Max nTPM: 594.4
Min nTPM: 34.0
Std nTPM: 82.3
Median nTPM: 239.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 594.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 423.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 421.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 419.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 417.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 412.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 408.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 408.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 402.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 386.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 381.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 361.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 361.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 358.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 351.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 340.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 339.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 336.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 336.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 333.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 332.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 330.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 325.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 325.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 322.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 322.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 320.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 318.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 318.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 318.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 317.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 316.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 313.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 312.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 311.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 310.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 310.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 304.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 304.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 303.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 302.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 302.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 301.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 300.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 299.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 296.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 296.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 296.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 296.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 296.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 295.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 295.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 295.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 294.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 294.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 294.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 292.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 290.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 287.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 284.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 283.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 282.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 281.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 279.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 278.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 278.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 277.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 276.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 276.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 275.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 274.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 274.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 273.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 272.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 271.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 271.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 270.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 270.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 268.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 268.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 268.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 267.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 266.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 266.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 264.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 263.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 263.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 261.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 260.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 259.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 258.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 258.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 256.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 256.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 256.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 256.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 255.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 255.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 254.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 254.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 254.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 254.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 253.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 253.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 252.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 250.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 250.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 250.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 248.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 248.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 247.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 247.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 246.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 246.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 245.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 245.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 244.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 244.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 242.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 240.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 240.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 240.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 239.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 238.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 235.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 233.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 233.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 233.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 233.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 232.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 229.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 229.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 228.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 228.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 227.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 227.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 226.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 226.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 225.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 223.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 220.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 220.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 219.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 219.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 217.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 217.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 216.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 215.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 213.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 212.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 211.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 211.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 210.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 210.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 210.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 208.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 207.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 206.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 206.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 205.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 204.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 204.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 204.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 202.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 201.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 200.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 199.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 197.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 195.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 194.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 191.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 189.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 189.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 189.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 186.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 184.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 183.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 183.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 180.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 180.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 177.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 176.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 175.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 173.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 173.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 173.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 171.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 170.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 170.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 169.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 168.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 168.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 167.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 165.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 161.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 160.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 159.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 155.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 154.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 152.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 151.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 150.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 150.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 149.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 149.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 148.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 143.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 143.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 143.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 142.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 140.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 139.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 136.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 135.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 135.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 131.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 130.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 130.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 129.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 127.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 124.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 123.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 120.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 120.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 108.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 108.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 106.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 103.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 103.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 101.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 101.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 99.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 93.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 91.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 89.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 87.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 86.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 83.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 83.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 80.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 79.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 72.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 71.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 64.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 43.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 34.0
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Brain - Putamen (basal ganglia)
Average nTPM: 165.7
Samples: 205

Max nTPM: 332.3
Min nTPM: 58.2
Std nTPM: 60.6
Median nTPM: 160.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 332.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 316.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 311.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 308.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 305.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 297.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 291.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 285.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 283.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 276.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 273.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 272.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 271.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 270.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 266.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 265.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 260.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 257.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 254.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 252.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 251.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 246.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 241.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 241.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 240.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 236.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 231.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 231.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 230.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 229.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 229.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 229.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 227.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 227.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 225.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 225.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 223.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 219.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 219.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 219.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 217.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 216.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 215.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 214.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 213.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 212.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 211.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 208.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 207.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 206.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 204.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 201.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 201.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 201.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 200.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 200.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 200.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 199.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 199.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 198.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 198.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 198.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 197.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 197.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 193.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 192.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 191.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 190.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 190.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 189.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 188.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 187.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 187.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 187.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 184.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 184.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 183.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 183.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 182.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 180.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 179.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 179.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 178.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 178.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 177.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 175.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 174.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 174.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 174.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 174.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 173.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 172.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 172.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 171.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 170.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 168.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 168.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 167.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 166.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 163.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 162.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 161.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 160.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 159.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 159.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 158.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 157.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 157.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 156.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 155.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 155.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 154.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 154.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 152.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 152.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 150.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 150.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 149.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 148.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 148.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 148.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 147.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 147.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 147.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 145.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 144.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 144.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 143.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 141.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 141.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 140.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 140.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 140.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 140.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 133.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 133.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 132.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 131.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 129.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 129.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 129.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 128.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 127.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 126.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 126.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 125.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 123.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 123.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 123.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 122.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 122.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 122.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 121.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 119.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 119.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 109.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 109.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 109.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 109.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 109.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 108.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 108.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 107.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 106.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 105.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 105.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 104.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 103.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 103.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 102.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 101.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 100.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 100.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 97.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 97.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 97.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 97.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 97.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 96.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 94.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 94.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 93.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 91.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 90.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 90.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 90.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 90.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 87.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 87.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 85.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 85.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 78.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 76.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 76.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 75.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 74.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 74.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 74.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 73.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 65.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 64.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 63.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 58.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 58.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 58.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

391.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 316.1
FF:10164-103B2 76 years, female 316.1
Nucleus accumbens
Scaled Tags Per Million: 375.9
FF:10037-101F1 23-56 years, mixed 375.9
Putamen
Scaled Tags Per Million: 391.1
FF:10176-103C5 60 years, female 391.1
Globus pallidus
Scaled Tags Per Million: 121.8
FF:10175-103C4 60 years, female 164.8
FF:10161-103A8 76 years, female 78.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.6
Pig sample Sample description nTPM
Caudate
nTPM: 74.6
Samples: 4

Max nTPM: 81.1
Min nTPM: 68.1
Sample A Female 69.3
Sample B Female 81.1
Sample C Male 79.7
Sample D Male 68.1
Putamen
nTPM: 74.2
Samples: 4

Max nTPM: 83.2
Min nTPM: 57.2
Sample A Female 79.8
Sample B Female 57.2
Sample C Male 83.2
Sample D Male 76.5
Septum
nTPM: 124.6
Samples: 4

Max nTPM: 213.2
Min nTPM: 84.6
Sample A Female 103.9
Sample B Female 84.6
Sample C Male 213.2
Sample D Male 96.8
Ventral pallidum
nTPM: 95.8
Samples: 4

Max nTPM: 148.9
Min nTPM: 75.1
Sample A Female 80.2
Sample B Female 75.1
Sample C Male 148.9
Sample D Male 78.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 66.0
Samples: 4

Max nTPM: 74.6
Min nTPM: 62.6
Sample A Male 62.6
Sample B Male 74.6
Sample C Female 64.1
Sample D Female 62.6
Septum
nTPM: 83.7
Samples: 4

Max nTPM: 89.4
Min nTPM: 79.1
Sample A Male 89.4
Sample B Male 83.1
Sample C Female 83.2
Sample D Female 79.1
Ventral forebrain
nTPM: 77.8
Samples: 4

Max nTPM: 86.6
Min nTPM: 71.5
Sample A Male 71.5
Sample B Male 79.0
Sample C Female 86.6
Sample D Female 74.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.8
68798085 Antisense, RP_050215_01_G03, Mouse strain C57BL/6J (56 days, male) 2.8
Pallidum
Expression energy: 4.8
68798085 Antisense, RP_050215_01_G03, Mouse strain C57BL/6J (56 days, male) 4.8

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