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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:268.5 nTPM
HPA:54.3 nTPM
GTEx:268.5 nTPM
FANTOM5:115.8 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006913
Cholangiocytes Medium
Hepatocytes High



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.3
N/A
Female, age 60
Liver sample 21
nTPM: 37.1
overview
Male, age 54
Liver sample 23
nTPM: 48.1
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 43.6
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 18.4
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 21.8
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 52.3
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 40.5
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 129.2
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 65.3
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 87.1
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.5
GTEx sample id Sample description nTPM
Liver
Average nTPM: 268.5
Samples: 226

Max nTPM: 709.3
Min nTPM: 11.3
Std nTPM: 158.5
Median nTPM: 248.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 709.3
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 686.4
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 659.3
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 647.3
GTEX-11ZUS-2526-SM-59872 30-39 years, male 646.8
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 603.8
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 599.8
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 575.6
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 560.0
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 547.9
GTEX-18465-1626-SM-7LG6N 50-59 years, male 542.6
GTEX-RN64-1826-SM-48FDV 50-59 years, male 542.1
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 541.4
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 531.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 528.5
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 527.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 523.2
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 521.7
GTEX-14JG1-1626-SM-664NH 40-49 years, male 515.8
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 512.4
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 491.7
GTEX-17F96-1226-SM-79OK2 70-79 years, male 485.0
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 478.0
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 476.8
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 475.0
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 474.4
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 473.2
GTEX-YECK-1926-SM-4W21H 60-69 years, male 470.0
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 468.3
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 465.7
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 456.7
GTEX-13112-1426-SM-5EGH8 50-59 years, male 456.2
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 454.8
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 454.6
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 444.7
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 442.4
GTEX-144GL-1426-SM-79OMA 50-59 years, male 439.4
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 439.0
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 436.7
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 432.4
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 431.9
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 430.5
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 429.9
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 429.5
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 427.8
GTEX-18A7A-1526-SM-72D69 50-59 years, female 424.5
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 424.0
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 417.8
GTEX-11GSP-0626-SM-5986T 60-69 years, female 415.3
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 413.0
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 410.0
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 410.0
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 405.2
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 400.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 394.9
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 394.7
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 387.1
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 385.9
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 385.0
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 376.3
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 364.7
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 362.2
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 362.1
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 361.8
GTEX-QESD-2026-SM-447BI 20-29 years, male 358.8
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 358.6
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 357.8
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 353.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 351.3
GTEX-14E7W-1526-SM-6871X 70-79 years, male 350.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 349.8
GTEX-1B933-1226-SM-731DW 50-59 years, female 349.5
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 336.9
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 333.5
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 328.6
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 324.8
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 319.7
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 317.6
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 316.5
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 315.5
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 314.3
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 310.3
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 310.3
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 309.0
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 306.7
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 306.7
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 305.0
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 297.3
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 294.7
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 292.4
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 291.4
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 283.7
GTEX-14PHX-0526-SM-664NW 50-59 years, male 283.1
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 282.1
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 281.5
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 279.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 277.3
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 275.2
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 274.1
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 273.9
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 272.8
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 270.6
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 265.8
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 264.9
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 264.4
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 262.9
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 262.2
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 260.5
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 256.9
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 253.1
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 251.5
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 250.1
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 249.2
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 248.0
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 247.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 246.8
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 240.7
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 240.4
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 238.5
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 236.8
GTEX-17HHE-0126-SM-79398 50-59 years, male 235.6
GTEX-X261-1726-SM-4PQYT 50-59 years, male 235.3
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 233.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 232.7
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 226.9
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 226.3
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 222.1
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 222.0
GTEX-1399T-0826-SM-5IFES 60-69 years, male 221.8
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 220.4
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 219.2
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 218.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 215.6
GTEX-P78B-1326-SM-3P611 40-49 years, female 214.9
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 213.0
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 209.7
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 203.2
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 201.1
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 199.3
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 196.2
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 193.4
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 192.8
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 190.3
GTEX-18A66-2026-SM-7189C 60-69 years, male 190.2
GTEX-12696-0826-SM-5EGGE 60-69 years, male 188.0
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 188.0
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 183.5
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 183.3
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 182.2
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 180.5
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 180.1
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 179.2
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 177.4
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 175.5
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 175.4
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 174.9
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 174.2
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 173.6
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 171.8
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 168.8
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 167.3
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 160.2
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 159.2
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 153.3
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 151.3
GTEX-13113-1326-SM-5GCOI 60-69 years, female 145.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 143.3
GTEX-REY6-1226-SM-48FDR 60-69 years, male 142.6
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 140.4
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 139.7
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 139.4
GTEX-Q734-0326-SM-48U15 40-49 years, female 139.4
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 138.6
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 136.3
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 130.0
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 126.6
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 126.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 123.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 123.2
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 123.0
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 117.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 117.6
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 115.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 114.4
GTEX-1B932-1426-SM-793AN 40-49 years, female 112.4
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 112.1
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 111.2
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 108.0
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 106.1
GTEX-S33H-1626-SM-4AD68 30-39 years, male 105.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 99.4
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 95.1
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 91.2
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 90.1
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 86.9
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 85.1
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 80.4
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 80.0
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 76.9
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 76.9
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 73.4
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 73.2
GTEX-O5YV-0726-SM-EV798 60-69 years, female 65.8
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 64.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 63.5
GTEX-QEL4-1226-SM-447A4 50-59 years, male 59.7
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 56.4
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 55.0
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 54.3
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 53.2
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 50.0
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 49.2
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 48.9
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 44.4
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 43.8
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 43.7
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 40.0
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 37.4
GTEX-14XAO-0226-SM-68728 60-69 years, female 36.9
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 29.6
GTEX-S32W-1926-SM-4AD63 50-59 years, female 27.2
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 26.4
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 25.9
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 17.5
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 16.5
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 11.3
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

115.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 115.8
FF:10018-101C9 64,69,70 years, mixed 115.8

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