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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:95.3 nTPM
HPA Brain:47.2 nTPM
GTEx:95.3 nTPM
FANTOM5:132.2 Scaled Tags Per Million
Pig:133.1 nTPM
Mouse:95.4 nTPM
Allen mouse:5.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023015Antibody HPA052395
Glial cells Not detectedLow
Neuronal cells MediumLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 46.4
2846 Female, age 79, unknown 58.8
2481 Female, age 94, left hemisphere 52.4
2290 Female, age 72, unknown 49.7
1857 Female, age 85, left hemisphere 48.1
1781 Male, age 74, unknown 43.3
1854 Male, age 80, left hemisphere 43.2
2288 Male, age 75, left hemisphere 43.0
2289 Male, age 61, right hemisphere 32.8
Globus pallidus, externus
nTPM: 34.9
2772 Female, age 79, unknown 44.4
2395 Male, age 75, both hemispheres 40.4
1996 Male, age 80, right hemisphere 35.7
2646 Male, age 61, right hemisphere 28.3
2567 Female, age 72, unknown 25.8
Globus pallidus, internus
nTPM: 36.9
2287 Male, age 75, right hemisphere 49.3
2483 Female, age 94, right hemisphere 48.9
2778 Female, age 91, both hemispheres 37.8
1818 Male, age 74, unknown 35.9
2037 Male, age 80, right hemisphere 33.4
2566 Female, age 72, unknown 28.2
2111 Female, age 85, right hemisphere 24.8
Nucleus accumbens
nTPM: 46.7
2698 Female, age 72, unknown 62.3
1783 Male, age 74, unknown 54.5
1856 Female, age 91, right hemisphere 51.3
2391 Female, age 94, left hemisphere 50.5
2824 Male, age 61, right hemisphere 45.5
1806 Female, age 85, left hemisphere 44.7
2286 Male, age 75, left hemisphere 40.7
2732 Male, age 80, right hemisphere 24.3
Nucleus basalis of Meynert
nTPM: 37.1
2821 Male, age 75, both hemispheres 41.6
2484 Female, age 94, left hemisphere 38.5
2393 Male, age 80, right hemisphere 38.4
2569 Male, age 61, both hemispheres 29.7
Nucleus of the diagonal band
nTPM: 47.2
1812 Female, age 91, both hemispheres 58.0
2775 Male, age 80, right hemisphere 57.9
2195 Female, age 85, both hemispheres 46.1
2029 Male, age 61, right hemisphere 39.9
1979 Male, age 74, unknown 34.1
Putamen
nTPM: 42.6
1937 Female, age 91, right hemisphere 51.6
2482 Female, age 94, left hemisphere 48.2
1838 Male, age 80, right hemisphere 47.6
2466 Female, age 79, unknown 46.3
1829 Male, age 74, unknown 46.0
2647 Male, age 75, left hemisphere 34.1
2489 Female, age 72, unknown 24.6
Septal nuclei
nTPM: 41.0
2031 Female, age 72, unknown 52.6
1960 Male, age 74, unknown 49.1
2629 Female, age 94, right hemisphere 47.6
2009 Female, age 91, both hemispheres 41.7
2199 Male, age 80, right hemisphere 35.9
2394 Male, age 61, left hemisphere 31.4
2059 Female, age 85, both hemispheres 28.8
Stria terminalis, bed nucleus
nTPM: 37.7
1974 Female, age 91, both hemispheres 45.7
2486 Female, age 94, both hemispheres 35.9
2201 Male, age 74, unknown 31.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.3
Samples: 246

Max nTPM: 150.1
Min nTPM: 35.8
Std nTPM: 20.3
Median nTPM: 79.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 150.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 145.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 135.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 130.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 129.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 127.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 126.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 124.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 124.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 120.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 117.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 117.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 116.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 115.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 115.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 115.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 114.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 114.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 112.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 110.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 110.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 110.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 110.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 109.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 109.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 107.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 107.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 106.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 106.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 106.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 105.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 105.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 105.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 104.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 104.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 104.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 104.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 104.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 103.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 103.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 102.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 101.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 101.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 101.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 100.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 98.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 98.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 98.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 98.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 97.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 96.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 96.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 96.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 96.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 96.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 95.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 95.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 95.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 93.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 93.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 93.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 92.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 91.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 90.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 90.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 90.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 89.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 89.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 89.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 88.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 88.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 88.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 87.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 87.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 87.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 86.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 86.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 86.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 86.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 86.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 85.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 85.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 85.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 85.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 85.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 85.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 85.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 85.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 84.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 84.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 84.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 84.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 84.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 84.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 84.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 83.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 83.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 83.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 83.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 83.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 83.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 83.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 83.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 82.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 82.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 82.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 82.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 82.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 82.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 81.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 81.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 81.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 81.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 81.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 80.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 80.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 79.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 79.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 79.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 79.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 79.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 79.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 79.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 79.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 79.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 78.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 78.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 78.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 77.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 77.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 77.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 76.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 76.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 76.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 76.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 75.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 75.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 75.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 75.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 75.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 74.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 74.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 74.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 73.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 73.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 73.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 72.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 72.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 72.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 72.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 72.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 71.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 71.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 71.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 71.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 71.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 70.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 70.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 70.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 70.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 69.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 69.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 69.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 68.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 68.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 68.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 67.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 67.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 67.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 67.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 67.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 66.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 66.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 66.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 66.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 66.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 65.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 65.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 65.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 64.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 64.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 64.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 64.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 64.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 63.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 63.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 62.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 62.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 61.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 61.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 61.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 61.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 61.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 61.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 60.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 60.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 59.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 59.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 58.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 58.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 58.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 57.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 56.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 56.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 55.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 54.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 54.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 53.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 53.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 53.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 53.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 53.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 51.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 51.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 47.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 46.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 46.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 41.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 95.3
Samples: 246

Max nTPM: 317.4
Min nTPM: 43.6
Std nTPM: 28.1
Median nTPM: 93.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 317.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 199.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 189.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 175.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 167.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 165.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 158.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 156.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 154.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 153.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 147.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 146.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 134.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 134.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 134.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 133.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 132.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 131.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 130.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 129.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 129.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 128.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 127.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 126.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 124.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 123.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 123.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 123.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 123.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 122.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 122.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 119.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 118.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 118.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 117.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 116.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 115.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 113.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 112.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 112.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 112.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 112.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 111.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 111.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 110.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 109.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 109.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 109.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 109.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 109.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 108.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 108.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 108.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 107.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 107.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 107.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 106.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 106.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 106.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 105.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 105.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 105.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 104.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 104.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 104.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 103.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 103.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 103.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 102.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 102.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 102.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 102.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 101.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 101.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 101.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 101.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 100.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 100.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 100.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 100.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 100.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 99.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 99.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 99.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 99.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 99.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 99.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 98.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 98.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 98.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 98.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 98.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 98.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 97.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 97.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 97.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 97.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 97.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 97.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 97.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 96.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 96.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 96.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 96.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 96.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 96.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 96.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 95.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 95.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 95.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 95.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 95.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 95.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 95.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 94.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 94.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 93.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 93.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 93.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 93.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 93.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 93.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 93.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 93.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 93.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 93.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 92.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 92.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 91.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 91.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 91.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 91.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 91.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 91.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 90.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 90.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 90.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 90.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 90.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 89.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 89.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 89.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 89.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 89.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 88.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 88.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 88.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 87.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 87.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 86.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 86.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 86.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 86.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 85.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 85.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 85.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 85.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 84.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 84.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 83.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 83.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 83.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 82.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 82.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 82.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 82.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 82.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 82.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 82.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 82.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 82.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 82.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 81.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 81.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 81.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 81.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 80.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 80.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 80.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 80.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 79.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 79.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 78.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 78.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 78.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 78.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 78.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 77.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 77.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 77.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 77.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 77.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 76.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 76.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 76.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 76.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 76.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 76.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 76.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 75.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 75.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 75.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 74.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 74.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 74.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 73.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 73.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 73.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 73.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 73.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 72.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 71.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 71.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 71.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 71.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 70.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 69.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 68.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 68.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 67.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 65.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 65.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 65.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 64.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 64.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 64.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 64.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 64.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 63.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 63.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 62.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 61.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 58.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 58.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 58.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 57.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 54.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 51.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 51.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 50.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 49.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 47.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 46.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 43.6
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Brain - Putamen (basal ganglia)
Average nTPM: 82.6
Samples: 205

Max nTPM: 185.3
Min nTPM: 38.6
Std nTPM: 22.4
Median nTPM: 79.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 185.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 176.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 143.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 137.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 136.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 134.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 131.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 126.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 125.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 124.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 121.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 120.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 120.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 117.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 115.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 113.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 113.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 111.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 111.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 110.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 109.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 109.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 108.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 107.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 107.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 107.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 107.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 107.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 106.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 106.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 106.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 104.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 102.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 102.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 101.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 100.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 100.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 99.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 99.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 98.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 96.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 96.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 96.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 96.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 96.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 95.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 95.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 95.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 95.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 95.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 94.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 94.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 94.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 94.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 94.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 93.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 93.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 93.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 93.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 93.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 92.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 91.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 91.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 90.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 90.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 89.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 89.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 89.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 89.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 89.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 88.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 88.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 88.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 88.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 88.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 88.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 87.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 87.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 86.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 86.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 86.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 85.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 85.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 85.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 85.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 84.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 83.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 83.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 82.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 82.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 81.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 81.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 81.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 80.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 79.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 79.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 79.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 79.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 79.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 79.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 79.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 79.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 79.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 79.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 78.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 78.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 78.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 78.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 78.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 77.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 77.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 77.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 76.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 76.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 75.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 75.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 75.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 74.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 74.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 74.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 74.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 73.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 73.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 73.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 72.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 72.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 72.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 72.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 72.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 71.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 71.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 71.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 71.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 71.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 71.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 71.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 71.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 71.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 71.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 70.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 70.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 70.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 70.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 70.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 70.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 69.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 69.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 68.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 68.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 68.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 68.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 67.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 67.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 65.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 65.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 65.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 64.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 64.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 64.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 64.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 64.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 64.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 63.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 63.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 63.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 62.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 62.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 62.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 62.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 62.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 62.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 61.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 61.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 60.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 60.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 60.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 59.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 56.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 56.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 56.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 55.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 54.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 54.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 54.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 52.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 52.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 49.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 49.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 48.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 47.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 47.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 47.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 46.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 44.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 42.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 38.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

132.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 121.8
FF:10164-103B2 76 years, female 121.8
Nucleus accumbens
Scaled Tags Per Million: 114.2
FF:10037-101F1 23-56 years, mixed 114.2
Putamen
Scaled Tags Per Million: 132.2
FF:10176-103C5 60 years, female 132.2
Globus pallidus
Scaled Tags Per Million: 86.4
FF:10161-103A8 76 years, female 97.6
FF:10175-103C4 60 years, female 75.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.1
Pig sample Sample description nTPM
Caudate
nTPM: 92.8
Samples: 4

Max nTPM: 102.8
Min nTPM: 87.7
Sample A Female 90.4
Sample B Female 87.7
Sample C Male 102.8
Sample D Male 90.2
Putamen
nTPM: 133.1
Samples: 4

Max nTPM: 171.4
Min nTPM: 95.0
Sample A Female 171.4
Sample B Female 95.0
Sample C Male 146.0
Sample D Male 120.0
Septum
nTPM: 109.5
Samples: 4

Max nTPM: 119.6
Min nTPM: 89.3
Sample A Female 115.2
Sample B Female 89.3
Sample C Male 119.6
Sample D Male 113.7
Ventral pallidum
nTPM: 110.5
Samples: 4

Max nTPM: 122.8
Min nTPM: 99.5
Sample A Female 99.5
Sample B Female 104.2
Sample C Male 122.8
Sample D Male 115.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 95.4
Samples: 4

Max nTPM: 101.2
Min nTPM: 92.3
Sample A Male 101.2
Sample B Male 95.4
Sample C Female 92.3
Sample D Female 92.7
Septum
nTPM: 93.9
Samples: 4

Max nTPM: 101.9
Min nTPM: 86.4
Sample A Male 90.4
Sample B Male 101.9
Sample C Female 96.7
Sample D Female 86.4
Ventral forebrain
nTPM: 83.1
Samples: 4

Max nTPM: 89.0
Min nTPM: 72.4
Sample A Male 72.4
Sample B Male 86.1
Sample C Female 89.0
Sample D Female 85.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.5
68795402 Antisense, RP_041116_02_H04, Mouse strain C57BL/6J (56 days, male) 5.5
Pallidum
Expression energy: 4.1
68795402 Antisense, RP_041116_02_H04, Mouse strain C57BL/6J (56 days, male) 4.1

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