We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FAM107A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • FAM107A
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:537.7 nTPM
HPA Brain:937.0 nTPM
GTEx:537.7 nTPM
Mouse:186.5 nTPM
Allen mouse:0.0 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

937.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 300.0
1961 Female, age 42, unknown 423.2
2226 Male, age 75, left hemisphere 176.8
Dorsomedial nucleus
nTPM: 480.2
1989 Male, age 62, unknown 638.4
2017 Female, age 42, unknown 481.7
2041 Female, age 72, unknown 320.5
Lateral hypothalamic area
nTPM: 527.5
2412 Male, age 62, unknown 650.6
1791 Male, age 80, right hemisphere 593.6
2271 Male, age 75, both hemispheres 573.2
2228 Male, age 66, unknown 292.6
Mammillary body
nTPM: 601.1
1834 Female, age 42, unknown 1026.5
1923 Female, age 72, unknown 534.1
2413 Male, age 66, unknown 522.6
1945 Male, age 80, right hemisphere 470.8
1948 Female, age 72, unknown 451.5
Paraventricular nucleus
nTPM: 507.6
2700 Male, age 62, unknown 507.6
Preoptic area
nTPM: 393.9
1861 Female, age 42, unknown 533.2
2414 Female, age 72, unknown 420.7
1907 Male, age 80, right hemisphere 228.0
Supraoptic nucleus
nTPM: 937.0
1894 Female, age 72, unknown 1136.3
2043 Male, age 62, unknown 1032.5
2835 Female, age 72, unknown 642.2
Ventromedial nucleus
nTPM: 345.6
1822 Female, age 42, unknown 406.8
1982 Female, age 72, unknown 284.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

537.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 537.7
Samples: 202

Max nTPM: 3152.9
Min nTPM: 106.5
Std nTPM: 400.9
Median nTPM: 412.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 3152.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 2150.5
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 1775.9
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 1755.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1611.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1608.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1474.8
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 1469.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1351.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1331.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1321.3
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 1308.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1270.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1175.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1141.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1123.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1113.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1108.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1073.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 1026.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1025.8
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 1018.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1003.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 973.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 967.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 947.1
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 935.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 926.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 913.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 860.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 824.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 811.3
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 800.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 799.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 797.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 787.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 782.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 754.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 749.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 737.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 737.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 728.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 724.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 723.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 706.6
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 706.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 681.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 680.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 678.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 670.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 670.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 669.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 657.2
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 656.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 655.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 654.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 629.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 628.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 614.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 578.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 570.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 566.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 566.4
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 564.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 563.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 559.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 557.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 551.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 550.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 548.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 546.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 546.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 538.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 537.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 530.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 530.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 529.6
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 529.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 528.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 519.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 507.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 505.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 498.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 498.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 496.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 486.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 483.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 483.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 479.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 471.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 467.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 465.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 465.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 459.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 450.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 440.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 433.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 428.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 426.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 425.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 414.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 411.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 408.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 408.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 407.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 407.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 406.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 404.9
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 403.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 399.5
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 396.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 395.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 391.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 384.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 379.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 365.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 363.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 362.7
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 360.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 358.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 357.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 356.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 355.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 354.2
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 352.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 343.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 342.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 340.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 337.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 337.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 323.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 317.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 312.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 310.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 308.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 307.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 304.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 304.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 302.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 300.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 299.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 299.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 295.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 295.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 291.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 286.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 286.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 284.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 284.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 284.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 284.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 275.6
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 273.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 272.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 267.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 266.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 265.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 265.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 264.6
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 258.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 252.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 251.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 250.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 248.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 247.7
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 247.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 246.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 244.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 242.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 238.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 233.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 229.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 225.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 222.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 220.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 219.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 217.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 210.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 208.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 198.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 196.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 193.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 191.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 185.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 184.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 183.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 182.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 172.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 172.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 164.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 163.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 153.1
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 145.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 144.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 142.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 134.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 132.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 130.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 121.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 121.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 120.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 106.5
Show allShow less

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 186.5
Samples: 4

Max nTPM: 220.8
Min nTPM: 149.6
Sample A Male 149.6
Sample B Male 169.6
Sample C Female 220.8
Sample D Female 206.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
74431465 Antisense, RP_060207_02_A08, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org