PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1625.8 nTPM
FANTOM5:1320.3 Scaled Tags Per Million
Pig:3756.2 nTPM
Mouse:438.9 nTPM
Allen mouse:7.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1625.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1276.7
2301 Female, age 85, both hemispheres 1976.6
2188 Female, age 91, both hemispheres 1428.3
2090 Male, age 80, both hemispheres 1224.1
1984 Male, age 76, both hemispheres 477.6
Area postrema
nTPM: 1066.9
2306 Male, age 80, both hemispheres 1456.9
2799 Male, age 61, both hemispheres 1276.9
2054 Male, age 76, both hemispheres 466.9
Dorsal cochlear nucleus
nTPM: 776.5
2187 Female, age 91, both hemispheres 1019.5
2378 Male, age 80, both hemispheres 813.3
2802 Male, age 74, right hemisphere 775.4
2370 Male, age 61, both hemispheres 670.0
2058 Male, age 76, both hemispheres 604.3
Dorsal medullary reticular nucleus
nTPM: 1047.0
2373 Male, age 61, both hemispheres 1320.1
2088 Male, age 76, both hemispheres 933.5
2040 Female, age 85, both hemispheres 887.4
Dorsal motor vagal complex
nTPM: 894.7
2797 Male, age 61, both hemispheres 1777.6
2185 Male, age 76, both hemispheres 1176.1
2807 Female, age 85, both hemispheres 1064.8
2643 Male, age 74, both hemispheres 807.3
2000 Male, age 74, unknown 703.4
2813 Female, age 72, unknown 604.8
2133 Female, age 91, both hemispheres 539.8
2844 Male, age 55, unknown 484.1
Dorsal tegmental nucleus
nTPM: 742.3
2083 Male, age 80, both hemispheres 920.5
2326 Male, age 74, both hemispheres 773.1
1936 Male, age 76, left hemisphere 702.5
2358 Male, age 61, both hemispheres 573.1
Dorsolateral tegmental area
nTPM: 773.0
2751 Female, age 85, both hemispheres 1041.3
2337 Male, age 61, both hemispheres 977.5
2654 Male, age 80, both hemispheres 944.4
2360 Male, age 74, both hemispheres 502.4
2141 Male, age 76, both hemispheres 399.5
Gigantocellular reticular nuclei, medullary
nTPM: 934.7
2314 Male, age 61, both hemispheres 1706.8
2387 Female, age 91, both hemispheres 1100.0
2310 Male, age 80, both hemispheres 928.8
1876 Female, age 85, both hemispheres 879.6
2022 Male, age 76, right hemisphere 631.5
2462 Male, age 74, both hemispheres 361.3
Gigantocellular reticular nuclei, pars
nTPM: 988.7
2706 Male, age 80, both hemispheres 1137.9
2330 Male, age 80, both hemispheres 1137.4
2336 Male, age 61, both hemispheres 1113.5
2084 Female, age 85, both hemispheres 898.8
2168 Male, age 76, both hemispheres 655.7
Inferior olive
nTPM: 1139.9
2628 Female, age 91, both hemispheres 1338.9
2178 Male, age 61, both hemispheres 1323.6
2085 Female, age 85, both hemispheres 1135.0
2379 Male, age 80, both hemispheres 1097.1
2563 Male, age 74, both hemispheres 805.1
Kolliker-Fuse nucleus
nTPM: 923.4
2793 Female, age 91, left hemisphere 1451.4
2163 Male, age 80, both hemispheres 816.0
2315 Male, age 76, right hemisphere 502.9
Lateral lemniscal nuclei
nTPM: 812.0
2320 Female, age 91, left hemisphere 1217.4
2169 Male, age 76, both hemispheres 755.6
2036 Male, age 80, both hemispheres 749.1
2746 Female, age 85, left hemisphere 685.0
2453 Male, age 74, right hemisphere 653.0
Lateral medullary reticular nucleus
nTPM: 1201.7
2374 Male, age 61, both hemispheres 1612.3
2852 Male, age 80, both hemispheres 1443.3
2190 Female, age 85, both hemispheres 1265.0
2804 Female, age 91, both hemispheres 1022.3
2305 Male, age 74, both hemispheres 970.0
2044 Male, age 76, both hemispheres 897.2
Lateral parabrachial nucleus
nTPM: 932.1
2792 Male, age 76, both hemispheres 1460.2
2013 Male, age 80, both hemispheres 959.6
2790 Male, age 61, both hemispheres 714.9
2139 Female, age 85, right hemisphere 593.9
Lateral vestibular nucleus
nTPM: 947.1
2311 Male, age 80, both hemispheres 1135.1
2184 Male, age 76, both hemispheres 759.1
Locus coeruleus
nTPM: 379.4
2720 Male, age 74, both hemispheres 606.2
2162 Male, age 80, both hemispheres 555.8
2317 Female, age 72, unknown 374.4
2123 Female, age 91, both hemispheres 305.3
2788 Male, age 74, unknown 304.6
2014 Male, age 55, unknown 296.7
1980 Male, age 76, both hemispheres 212.7
Medial olivary nucleus
nTPM: 1351.8
1943 Male, age 61, both hemispheres 1655.2
1962 Male, age 76, both hemispheres 1640.2
2851 Male, age 80, both hemispheres 1104.5
2138 Female, age 91, both hemispheres 1007.2
Medial parabrachial nucleus
nTPM: 909.2
2170 Female, age 91, both hemispheres 1102.6
2463 Female, age 85, right hemisphere 910.0
2854 Male, age 80, both hemispheres 891.1
2786 Male, age 76, both hemispheres 855.9
2156 Male, age 61, both hemispheres 786.3
Medial periolivary nuclei
nTPM: 783.4
2458 Female, age 91, both hemispheres 1158.2
2081 Male, age 80, both hemispheres 898.5
2063 Male, age 76, both hemispheres 652.5
2791 Male, age 74, right hemisphere 609.5
2171 Female, age 85, both hemispheres 598.4
Medial vestibular nucleus
nTPM: 765.8
2624 Male, age 61, both hemispheres 1011.0
2803 Female, age 91, both hemispheres 965.6
2093 Male, age 80, both hemispheres 878.1
2801 Male, age 74, both hemispheres 708.2
2743 Female, age 85, both hemispheres 668.6
2134 Male, age 76, both hemispheres 363.3
Motor facial nucleus
nTPM: 915.3
2697 Female, age 85, both hemispheres 1417.2
2126 Male, age 61, both hemispheres 1073.9
2795 Female, age 91, both hemispheres 925.6
2327 Male, age 80, both hemispheres 808.7
2365 Male, age 74, right hemisphere 731.5
2062 Male, age 76, both hemispheres 534.9
Motor hypoglossal nucleus
nTPM: 977.0
2182 Male, age 80, both hemispheres 1604.0
2132 Female, age 85, both hemispheres 1222.9
2125 Female, age 91, both hemispheres 898.8
2461 Male, age 61, both hemispheres 848.9
2277 Male, age 76, both hemispheres 310.2
Motor trigeminal nucleus
nTPM: 990.0
2321 Female, age 91, both hemispheres 1367.3
2309 Male, age 76, both hemispheres 1039.8
2335 Male, age 61, both hemispheres 933.7
2560 Male, age 74, both hemispheres 832.8
2079 Male, age 80, both hemispheres 776.4
Nuclei of the trapezoid body
nTPM: 787.9
2166 Male, age 80, both hemispheres 1212.8
2368 Female, age 91, both hemispheres 958.0
2159 Male, age 61, both hemispheres 703.9
1983 Male, age 76, both hemispheres 618.3
2735 Female, age 85, both hemispheres 446.4
Nucleus ambiguus
nTPM: 1119.3
2071 Male, age 76, both hemispheres 1464.0
2096 Female, age 85, both hemispheres 774.5
Nucleus cuneatus
nTPM: 1235.8
2808 Female, age 85, both hemispheres 1664.2
2380 Male, age 80, both hemispheres 1557.5
2381 Male, age 80, both hemispheres 1512.9
2805 Female, age 91, both hemispheres 1378.8
2100 Male, age 76, both hemispheres 1117.3
2376 Male, age 61, both hemispheres 1109.4
2562 Male, age 61, both hemispheres 982.6
2564 Male, age 74, both hemispheres 938.6
2131 Male, age 76, both hemispheres 861.1
Nucleus gracilis
nTPM: 1470.5
2382 Male, age 80, both hemispheres 1906.8
2299 Female, age 85, both hemispheres 1351.2
2627 Male, age 74, both hemispheres 1153.5
Nucleus raphe magnus
nTPM: 651.3
2328 Male, age 80, both hemispheres 964.1
2459 Female, age 91, both hemispheres 920.7
2051 Male, age 76, both hemispheres 678.9
2455 Male, age 74, both hemispheres 658.2
2172 Female, age 85, both hemispheres 370.2
2160 Male, age 61, both hemispheres 315.7
Nucleus raphe obscurus
nTPM: 1625.8
2845 Female, age 85, midline 1901.7
2142 Male, age 76, midline 1525.4
2800 Male, age 61, midline 1450.4
Nucleus raphe pallidus
nTPM: 1200.0
2145 Male, age 76, midline 1721.7
2183 Male, age 80, midline 977.6
1924 Male, age 61, midline 900.6
Nucleus tractus solitarii
nTPM: 421.2
2307 Male, age 80, both hemispheres 567.8
2191 Female, age 85, both hemispheres 523.1
2656 Male, age 76, both hemispheres 381.9
2144 Female, age 91, right hemisphere 212.1
Paramedian reticular nucleus
nTPM: 814.2
2052 Male, age 76, both hemispheres 1023.0
2057 Male, age 80, both hemispheres 805.6
2313 Male, age 61, both hemispheres 721.0
2050 Female, age 85, both hemispheres 707.3
Parvicellular reticular nuclei
nTPM: 848.8
2095 Male, age 76, both hemispheres 1041.6
2119 Male, age 80, both hemispheres 866.7
2558 Male, age 74, both hemispheres 638.1
Parvicellular reticular nuclei, medullary
nTPM: 753.8
2189 Female, age 91, both hemispheres 819.0
2181 Male, age 80, left hemisphere 759.6
2091 Female, age 85, both hemispheres 682.7
Pedunculopontine tegmental nucleus
nTPM: 736.3
2338 Male, age 61, both hemispheres 848.2
2334 Male, age 80, both hemispheres 817.5
1921 Female, age 85, both hemispheres 543.2
Peritrigeminal nucleus
nTPM: 1084.6
2067 Female, age 85, both hemispheres 1149.8
2179 Male, age 61, both hemispheres 1114.5
2136 Male, age 76, both hemispheres 989.5
Pontine nuclei
nTPM: 797.2
2319 Female, age 91, both hemispheres 1260.3
2454 Male, age 74, left hemisphere 1049.3
2109 Female, age 72, unknown 922.0
1968 Male, age 76, left hemisphere 889.2
2115 Male, age 80, left hemisphere 857.3
1863 Male, age 55, unknown 667.0
2787 Female, age 85, both hemispheres 429.3
2727 Male, age 61, right hemisphere 302.9
Pontine raphe nucleus
nTPM: 518.1
2122 Female, age 85, midline 554.1
2853 Male, age 76, midline 482.1
Posteroventral cochlear nucleus
nTPM: 1133.0
2135 Female, age 91, both hemispheres 1605.3
2341 Male, age 80, both hemispheres 1334.0
2371 Male, age 61, both hemispheres 1073.7
2070 Male, age 76, both hemispheres 1031.1
2752 Female, age 85, both hemispheres 620.9
Prepositus hypoglossal nucleus
nTPM: 811.1
2855 Female, age 85, right hemisphere 1123.0
2086 Male, age 80, both hemispheres 499.2
Principal sensory trigeminal nucleus
nTPM: 795.7
2367 Female, age 91, left hemisphere 1197.1
2324 Male, age 76, both hemispheres 828.3
2008 Male, age 80, left hemisphere 599.9
2158 Male, age 61, both hemispheres 557.7
Reticular pontine nucleus, caudal
nTPM: 917.7
2457 Female, age 91, both hemispheres 1041.0
2559 Male, age 74, both hemispheres 986.0
2092 Male, age 76, both hemispheres 927.2
2332 Male, age 80, right hemisphere 716.8
Reticular pontine nucleus, oral
nTPM: 919.7
2366 Female, age 91, both hemispheres 1409.8
2167 Male, age 76, both hemispheres 909.3
1939 Male, age 80, both hemispheres 827.7
2012 Female, age 85, both hemispheres 782.5
2361 Male, age 74, both hemispheres 669.2
Reticulotegmental nucleus
nTPM: 772.0
2322 Female, age 91, both hemispheres 876.5
2452 Male, age 74, both hemispheres 818.8
2333 Male, age 80, both hemispheres 815.7
2325 Male, age 76, both hemispheres 577.2
Spinal trigeminal nucleus, caudal
nTPM: 1082.2
2312 Male, age 61, both hemispheres 1576.4
2308 Male, age 80, both hemispheres 1366.7
2642 Male, age 74, both hemispheres 894.4
2447 Male, age 76, both hemispheres 812.8
2390 Female, age 91, both hemispheres 760.9
Spinal trigeminal nucleus, interpolar
nTPM: 727.1
2033 Male, age 80, both hemispheres 854.1
2386 Female, age 85, both hemispheres 768.9
2389 Female, age 91, both hemispheres 759.0
2625 Male, age 61, both hemispheres 646.1
2066 Male, age 76, right hemisphere 607.4
Spinal trigeminal nucleus, oral
nTPM: 711.0
2164 Male, age 80, both hemispheres 910.1
1978 Male, age 76, both hemispheres 715.2
2737 Female, age 85, both hemispheres 507.6
Spinal vestibular nucleus
nTPM: 969.6
2806 Female, age 85, both hemispheres 1184.7
2748 Male, age 76, both hemispheres 1066.9
2384 Male, age 74, both hemispheres 1014.3
2796 Male, age 61, both hemispheres 872.5
2780 Male, age 80, both hemispheres 867.6
2186 Female, age 91, both hemispheres 811.4
Subcoeruleus area
nTPM: 814.1
2369 Female, age 85, left hemisphere 1222.6
2089 Male, age 76, left hemisphere 803.1
1958 Male, age 80, both hemispheres 760.5
2451 Male, age 74, both hemispheres 735.6
2323 Female, age 91, left hemisphere 548.9
Superior olive
nTPM: 954.1
2020 Male, age 76, both hemispheres 1189.6
2561 Female, age 91, both hemispheres 1171.2
2329 Male, age 80, right hemisphere 1075.8
1875 Female, age 85, both hemispheres 671.6
2364 Male, age 74, right hemisphere 662.2
Superior vestibular nucleus
nTPM: 659.3
2015 Male, age 80, both hemispheres 864.2
2061 Male, age 76, both hemispheres 629.7
2383 Male, age 74, both hemispheres 484.2
Ventral medullary reticular nucleus
nTPM: 1186.1
2372 Male, age 61, both hemispheres 1419.2
2060 Male, age 76, both hemispheres 952.9
Ventral periolivary nuclei
nTPM: 940.9
2023 Male, age 76, both hemispheres 1295.7
2794 Female, age 91, left hemisphere 950.6
2165 Male, age 80, both hemispheres 834.7
2130 Female, age 85, both hemispheres 682.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1082.8
2118 Male, age 80, both hemispheres 1411.2
2180 Male, age 61, both hemispheres 1181.0
2302 Female, age 91, both hemispheres 977.6
2741 Female, age 85, both hemispheres 951.5
1986 Male, age 76, both hemispheres 892.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 869.4
2456 Female, age 91, both hemispheres 1091.5
2359 Male, age 61, both hemispheres 1073.0
1959 Male, age 76, both hemispheres 837.5
2161 Male, age 80, both hemispheres 816.4
2840 Female, age 85, both hemispheres 777.2
2449 Male, age 74, both hemispheres 621.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1320.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1019.6
FF:10182-103D2 60 years, female 1152.4
FF:10165-103B3 76 years, female 886.7
Medulla oblongata
Scaled Tags Per Million: 799.3
FF:10038-101F2 18-64 years, mixed 878.2
FF:10155-103A2 76 years, female 843.6
FF:10174-103C3 60 years, female 676.0
Pons
Scaled Tags Per Million: 1320.3
FF:10033-101E6 18-54 years, mixed 1320.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 3756.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 3756.2
Samples: 4

Max nTPM: 4808.2
Min nTPM: 2756.6
Sample A Female 3256.4
Sample B Female 2756.6
Sample C Male 4203.6
Sample D Male 4808.2
Pons
nTPM: 2280.5
Samples: 4

Max nTPM: 4116.3
Min nTPM: 1350.0
Sample A Female 1350.0
Sample B Female 1488.2
Sample C Male 2167.3
Sample D Male 4116.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 438.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 438.9
Samples: 4

Max nTPM: 510.6
Min nTPM: 357.8
Sample A Male 390.1
Sample B Male 357.8
Sample C Female 497.1
Sample D Female 510.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.4
69201510 Antisense, RP_050317_03_A10, Mouse strain C57BL/6J (56 days, male) 9.2
69174034 Antisense, RP_050329_01_H11, Mouse strain C57BL/6J (56 days, male) 5.7
Pons
Expression energy: 7.7
69201510 Antisense, RP_050317_03_A10, Mouse strain C57BL/6J (56 days, male) 8.6
69174034 Antisense, RP_050329_01_H11, Mouse strain C57BL/6J (56 days, male) 6.8

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