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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:52.4 nTPM
HPA Brain:79.7 nTPM
GTEx:52.4 nTPM
FANTOM5:188.0 Scaled Tags Per Million
Pig:52.5 nTPM
Mouse:27.9 nTPM
Allen mouse:13.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041506Antibody HPA043391
Glial cells LowNot detected
Neuronal cells LowLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 75.7
2289 Male, age 61, right hemisphere 95.4
1781 Male, age 74, unknown 85.2
2846 Female, age 79, unknown 76.6
2481 Female, age 94, left hemisphere 73.6
2290 Female, age 72, unknown 73.5
2288 Male, age 75, left hemisphere 71.7
1854 Male, age 80, left hemisphere 68.9
1857 Female, age 85, left hemisphere 61.1
Globus pallidus, externus
nTPM: 79.7
2646 Male, age 61, right hemisphere 93.8
2567 Female, age 72, unknown 92.4
1996 Male, age 80, right hemisphere 71.5
2395 Male, age 75, both hemispheres 70.3
2772 Female, age 79, unknown 70.2
Globus pallidus, internus
nTPM: 78.0
2566 Female, age 72, unknown 92.8
2111 Female, age 85, right hemisphere 84.8
2778 Female, age 91, both hemispheres 81.0
1818 Male, age 74, unknown 75.1
2037 Male, age 80, right hemisphere 73.6
2287 Male, age 75, right hemisphere 72.4
2483 Female, age 94, right hemisphere 66.2
Nucleus accumbens
nTPM: 70.7
2698 Female, age 72, unknown 85.4
2391 Female, age 94, left hemisphere 74.8
1783 Male, age 74, unknown 73.0
2732 Male, age 80, right hemisphere 71.4
1806 Female, age 85, left hemisphere 66.4
2286 Male, age 75, left hemisphere 65.8
1856 Female, age 91, right hemisphere 64.6
2824 Male, age 61, right hemisphere 64.3
Nucleus basalis of Meynert
nTPM: 76.4
2569 Male, age 61, both hemispheres 89.9
2821 Male, age 75, both hemispheres 81.9
2484 Female, age 94, left hemisphere 72.0
2393 Male, age 80, right hemisphere 62.0
Nucleus of the diagonal band
nTPM: 73.7
1979 Male, age 74, unknown 79.4
2195 Female, age 85, both hemispheres 79.0
2775 Male, age 80, right hemisphere 71.7
1812 Female, age 91, both hemispheres 70.4
2029 Male, age 61, right hemisphere 68.2
Putamen
nTPM: 73.4
2489 Female, age 72, unknown 83.5
2647 Male, age 75, left hemisphere 82.5
1829 Male, age 74, unknown 76.0
2482 Female, age 94, left hemisphere 69.5
1838 Male, age 80, right hemisphere 68.9
2466 Female, age 79, unknown 67.6
1937 Female, age 91, right hemisphere 65.7
Septal nuclei
nTPM: 77.8
2629 Female, age 94, right hemisphere 99.8
2394 Male, age 61, left hemisphere 81.9
1960 Male, age 74, unknown 77.5
2199 Male, age 80, right hemisphere 77.3
2059 Female, age 85, both hemispheres 75.2
2031 Female, age 72, unknown 68.3
2009 Female, age 91, both hemispheres 64.7
Stria terminalis, bed nucleus
nTPM: 77.9
2201 Male, age 74, unknown 84.1
2486 Female, age 94, both hemispheres 76.9
1974 Female, age 91, both hemispheres 72.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.5
Samples: 246

Max nTPM: 87.2
Min nTPM: 21.5
Std nTPM: 10.9
Median nTPM: 49.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 87.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 77.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 74.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 74.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 73.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 73.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 72.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 71.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 71.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 69.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 68.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 67.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 67.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 66.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 66.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 65.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 65.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 65.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 64.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 64.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 63.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 63.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 63.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 63.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 62.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 61.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 61.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 61.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 60.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 60.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 60.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 60.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 60.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 60.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 60.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 60.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 59.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 59.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 59.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 59.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 59.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 57.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 57.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 57.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 57.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 57.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 56.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 56.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 56.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 56.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 56.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 56.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 56.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 55.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 55.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 55.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 55.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 55.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 55.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 55.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 55.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 55.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 55.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 54.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 54.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 54.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 53.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 53.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 53.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 53.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 52.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 52.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 52.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 52.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 52.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 51.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 51.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 51.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 51.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 51.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 50.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 50.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 50.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 50.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 50.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 50.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 50.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 50.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 49.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 49.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 49.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 49.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 49.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 49.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 49.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 48.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 48.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 48.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 48.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 48.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 48.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 48.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 48.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 48.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 47.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 47.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 47.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 47.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 47.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 46.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 46.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 46.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 46.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 46.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 45.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 45.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 45.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 45.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 45.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 45.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 44.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 44.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 44.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 44.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 44.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 44.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 44.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 44.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 44.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 44.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 43.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 43.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 43.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 43.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 43.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 43.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 43.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 43.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 43.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 43.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 42.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 42.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 42.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 42.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 42.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 42.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 41.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 41.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 41.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 41.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 41.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 41.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 41.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 41.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 41.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 40.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 40.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 40.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 39.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 39.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 39.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 39.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 39.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 38.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 38.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 38.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 38.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 38.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 38.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 38.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 38.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 38.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 38.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 37.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 37.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 36.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 36.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 36.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 35.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 34.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 34.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 34.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 34.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 33.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 33.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 32.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 32.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 30.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 29.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 28.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 27.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 27.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 25.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 25.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 22.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 22.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 22.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 21.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 51.7
Samples: 246

Max nTPM: 138.3
Min nTPM: 22.7
Std nTPM: 14.1
Median nTPM: 49.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 138.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 113.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 90.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 88.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 84.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 84.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 83.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 81.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 78.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 76.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 76.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 76.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 75.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 75.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 75.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 73.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 73.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 73.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 73.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 71.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 70.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 70.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 70.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 69.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 68.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 67.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 66.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 66.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 65.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 65.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 65.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 65.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 64.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 64.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 64.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 64.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 64.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 64.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 63.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 63.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 63.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 63.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 62.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 62.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 61.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 61.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 61.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 61.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 61.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 60.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 60.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 60.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 60.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 60.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 59.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 59.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 59.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 59.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 59.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 58.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 58.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 58.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 58.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 57.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 57.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 57.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 57.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 57.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 57.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 56.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 56.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 56.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 56.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 56.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 56.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 56.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 55.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 55.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 55.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 55.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 55.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 54.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 54.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 54.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 54.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 53.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 53.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 53.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 53.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 53.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 53.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 52.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 52.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 52.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 52.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 52.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 51.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 51.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 51.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 51.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 51.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 51.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 50.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 50.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 50.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 50.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 50.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 49.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 49.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 49.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 49.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 49.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 49.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 49.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 49.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 49.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 49.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 49.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 49.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 49.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 49.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 49.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 48.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 48.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 48.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 48.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 48.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 48.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 48.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 48.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 47.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 47.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 47.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 47.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 47.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 46.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 46.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 46.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 46.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 46.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 46.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 46.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 46.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 46.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 45.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 45.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 45.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 45.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 45.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 45.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 45.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 45.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 45.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 44.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 44.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 44.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 44.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 44.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 44.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 44.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 44.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 44.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 43.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 43.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 43.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 43.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 43.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 43.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 43.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 42.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 42.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 42.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 42.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 42.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 42.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 41.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 41.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 41.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 41.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 41.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 41.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 41.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 41.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 41.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 41.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 41.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 41.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 41.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 41.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 41.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 40.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 40.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 40.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 40.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 39.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 39.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 39.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 39.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 39.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 39.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 39.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 39.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 38.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 38.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 38.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 37.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 37.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 37.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 36.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 35.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 35.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 34.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 34.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 34.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 34.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 34.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 34.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 34.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 33.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 33.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 32.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 32.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 29.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 29.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 29.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 29.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 29.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 29.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 29.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 28.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 27.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 22.7
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Brain - Putamen (basal ganglia)
Average nTPM: 52.4
Samples: 205

Max nTPM: 82.3
Min nTPM: 26.8
Std nTPM: 10.4
Median nTPM: 52.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 82.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 78.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 77.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 76.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 75.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 75.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 73.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 73.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 73.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 71.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 71.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 71.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 70.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 70.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 68.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 67.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 67.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 67.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 67.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 66.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 66.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 66.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 66.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 65.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 65.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 65.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 65.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 65.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 65.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 64.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 64.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 64.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 63.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 63.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 63.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 63.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 63.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 62.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 62.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 62.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 61.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 61.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 61.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 60.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 59.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 59.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 59.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 59.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 59.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 59.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 59.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 58.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 58.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 58.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 57.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 57.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 57.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 57.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 56.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 56.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 56.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 56.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 56.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 56.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 56.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 56.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 56.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 56.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 55.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 55.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 55.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 55.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 55.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 55.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 55.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 54.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 54.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 54.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 54.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 54.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 54.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 53.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 53.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 53.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 53.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 53.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 53.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 53.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 53.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 52.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 52.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 52.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 52.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 52.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 52.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 52.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 52.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 52.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 52.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 51.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 51.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 51.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 50.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 50.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 50.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 50.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 50.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 49.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 49.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 49.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 49.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 49.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 49.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 48.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 48.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 48.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 48.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 48.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 47.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 47.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 47.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 47.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 47.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 47.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 46.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 46.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 46.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 46.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 46.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 46.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 46.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 46.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 46.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 46.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 46.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 45.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 45.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 45.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 45.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 45.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 44.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 44.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 44.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 44.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 44.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 44.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 44.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 44.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 44.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 44.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 43.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 43.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 43.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 43.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 43.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 43.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 42.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 42.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 42.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 42.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 42.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 42.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 42.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 42.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 41.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 41.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 41.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 41.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 41.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 41.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 41.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 40.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 39.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 39.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 38.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 38.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 38.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 37.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 36.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 36.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 36.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 36.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 35.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 32.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 32.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 31.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 31.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 26.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

188.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 136.8
FF:10164-103B2 76 years, female 136.8
Nucleus accumbens
Scaled Tags Per Million: 123.1
FF:10037-101F1 23-56 years, mixed 123.1
Putamen
Scaled Tags Per Million: 127.2
FF:10176-103C5 60 years, female 127.2
Globus pallidus
Scaled Tags Per Million: 188.0
FF:10175-103C4 60 years, female 204.8
FF:10161-103A8 76 years, female 171.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.5
Pig sample Sample description nTPM
Caudate
nTPM: 47.2
Samples: 4

Max nTPM: 55.3
Min nTPM: 40.2
Sample A Female 40.2
Sample B Female 48.0
Sample C Male 55.3
Sample D Male 45.2
Putamen
nTPM: 52.6
Samples: 4

Max nTPM: 65.1
Min nTPM: 44.5
Sample A Female 48.7
Sample B Female 44.5
Sample C Male 51.9
Sample D Male 65.1
Septum
nTPM: 45.5
Samples: 4

Max nTPM: 47.4
Min nTPM: 43.0
Sample A Female 43.0
Sample B Female 44.0
Sample C Male 47.4
Sample D Male 47.4
Ventral pallidum
nTPM: 50.4
Samples: 4

Max nTPM: 60.2
Min nTPM: 41.7
Sample A Female 41.7
Sample B Female 46.6
Sample C Male 60.2
Sample D Male 53.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 25.6
Samples: 4

Max nTPM: 27.4
Min nTPM: 24.2
Sample A Male 25.4
Sample B Male 25.3
Sample C Female 24.2
Sample D Female 27.4
Septum
nTPM: 23.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 21.8
Sample A Male 26.5
Sample B Male 22.7
Sample C Female 21.8
Sample D Female 24.3
Ventral forebrain
nTPM: 27.9
Samples: 4

Max nTPM: 29.9
Min nTPM: 23.9
Sample A Male 28.1
Sample B Male 29.5
Sample C Female 23.9
Sample D Female 29.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.2
68797948 Antisense, RP_050215_01_E01, Mouse strain C57BL/6J (56 days, male) 13.2
Pallidum
Expression energy: 12.0
68797948 Antisense, RP_050215_01_E01, Mouse strain C57BL/6J (56 days, male) 12.0

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