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MTCL1
HPA
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  • MTCL1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MTCL1
Synonyms CCDC165, KIAA0802, SOGA2
Gene descriptioni

Full gene name according to HGNC.

Microtubule crosslinking factor 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 18
Cytoband p11.22
Chromosome location (bp) 8705556 - 8832778
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000168502 (version 109)
Entrez gene 23255
HGNC HGNC:29121
UniProt Q9Y4B5 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y4B5
GeneCards MTCL1
Antibodypedia MTCL1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Microtubule-associated factor involved in the late phase of epithelial polarization and microtubule dynamics regulation 1. Plays a role in the development and maintenance of non-centrosomal microtubule bundles at the lateral membrane in polarized epithelial cells 2. Required for faithful chromosome segregation during mitosis 3.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Cell division, Mitosis
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables microtubule binding activity. Predicted to be involved in establishment or maintenance of epithelial cell apical/basal polarity; microtubule bundle formation; and positive regulation of protein targeting to membrane. Located in midbody and spindle pole. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MTCL1-201
ENSP00000305027
ENST00000306329
Q9Y4B5
[Direct mapping] Microtubule cross-linking factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000922 [spindle pole]
GO:0001578 [microtubule bundle formation]
GO:0003723 [RNA binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0008017 [microtubule binding]
GO:0010506 [regulation of autophagy]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016327 [apicolateral plasma membrane]
GO:0016328 [lateral plasma membrane]
GO:0030496 [midbody]
GO:0042803 [protein homodimerization activity]
GO:0045197 [establishment or maintenance of epithelial cell apical/basal polarity]
GO:0090314 [positive regulation of protein targeting to membrane]
GO:0097427 [microtubule bundle]
Show all
1905 aa
209.5 kDa
No 0
MTCL1-202
ENSP00000352927
ENST00000359865
Q9Y4B5
[Direct mapping] Microtubule cross-linking factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000922 [spindle pole]
GO:0001578 [microtubule bundle formation]
GO:0003723 [RNA binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0008017 [microtubule binding]
GO:0010506 [regulation of autophagy]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016327 [apicolateral plasma membrane]
GO:0016328 [lateral plasma membrane]
GO:0030496 [midbody]
GO:0042803 [protein homodimerization activity]
GO:0045197 [establishment or maintenance of epithelial cell apical/basal polarity]
GO:0090314 [positive regulation of protein targeting to membrane]
GO:0097427 [microtubule bundle]
Show all
1586 aa
177.9 kDa
No 0
MTCL1-204
ENSP00000429556
ENST00000517570
Q9Y4B5
[Direct mapping] Microtubule cross-linking factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000922 [spindle pole]
GO:0001578 [microtubule bundle formation]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0008017 [microtubule binding]
GO:0010506 [regulation of autophagy]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0016327 [apicolateral plasma membrane]
GO:0016328 [lateral plasma membrane]
GO:0030496 [midbody]
GO:0042803 [protein homodimerization activity]
GO:0045197 [establishment or maintenance of epithelial cell apical/basal polarity]
GO:0090314 [positive regulation of protein targeting to membrane]
GO:0097427 [microtubule bundle]
Show all
1545 aa
173.3 kDa
No 0
MTCL1-213
ENSP00000463506
ENST00000523122
J3QLE1
[Direct mapping] Microtubule cross-linking factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
47 aa
5.9 kDa
No 0
MTCL1-216
ENSP00000512072
ENST00000695635
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005615 [extracellular space]
GO:0010506 [regulation of autophagy]
Show all
1970 aa
216.6 kDa
No 0
MTCL1-217
ENSP00000512073
ENST00000695636
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005615 [extracellular space]
GO:0010506 [regulation of autophagy]
GO:0042803 [protein homodimerization activity]
Show all
2011 aa
221.3 kDa
No 0

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