We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
COL3A1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • COL3A1
TISSUE PRIMARY DATA BREAST Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Breast
Tissue proteome
Breast
BREAST - Expression summary
Protein expression
Breasti

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Adipocytes: Not detected
Glandular cells: Not detected
Myoepithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:328.5 nTPM
HPA:328.5 nTPM
GTEx:164.5 nTPM
FANTOM5:132.0 Scaled Tags Per Million

BREAST - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007583Antibody CAB016766Antibody CAB059993
Adipocytes Not detectedNot detectedHigh
Glandular cells LowNot detectedLow
Myoepithelial cells LowNot detectedNot detected



BREAST - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

328.5
overview
Female, age 52
Breast sample 373
nTPM: 688.2
Cell types%
Glandular cells:
15

Adipocytes:
5

Other cell types:
80

overview
Female, age 80
Breast sample 390
nTPM: 500.4
Cell types%
Glandular cells:
5

Adipocytes:
15

Other cell types:
80

overview
Female, age 47
Breast sample 405
nTPM: 23.7
Cell types%
Glandular cells:
5

Adipocytes:
5

Other cell types:
90

overview
Female, age 38
Breast sample 410
nTPM: 101.5
Cell types%
Glandular cells:
40

Adipocytes:
5

Other cell types:
55


BREAST - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.5
GTEx sample id Sample description nTPM
Breast - Mammary Tissue
Average nTPM: 164.5
Samples: 459

Max nTPM: 2101.3
Min nTPM: 7.3
Std nTPM: 209.8
Median nTPM: 99.9
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 2101.3
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 2069.8
GTEX-1M5QR-2526-SM-E9U5P 40-49 years, male 1316.9
GTEX-1GF9V-2526-SM-7SB8K 60-69 years, male 1118.0
GTEX-1GZ2Q-2626-SM-7MXV9 40-49 years, male 1106.6
GTEX-1IGQW-0926-SM-ADEH6 60-69 years, male 1044.7
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 908.7
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 821.9
GTEX-1C6WA-2426-SM-7SB86 60-69 years, male 795.3
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 703.4
GTEX-183FY-1126-SM-7DHLJ 20-29 years, male 690.2
GTEX-1AX8Z-0926-SM-731AW 60-69 years, male 688.9
GTEX-17HG3-0126-SM-7IGNH 30-39 years, female 673.2
GTEX-11OF3-1926-SM-59889 60-69 years, male 621.0
GTEX-18A6Q-0926-SM-7LG4N 60-69 years, male 620.2
GTEX-1AX9I-0726-SM-73KWV 60-69 years, male 619.2
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 611.6
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 602.1
GTEX-1C475-1226-SM-7SB72 40-49 years, female 588.1
GTEX-1LG7Z-0726-SM-CXKYD 30-39 years, male 580.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 517.0
GTEX-17KNJ-2026-SM-7LG53 50-59 years, male 509.0
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 485.7
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 460.1
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 448.4
GTEX-1I1GV-2426-SM-CGQFM 60-69 years, male 433.7
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 426.8
GTEX-16YQH-2826-SM-6PAMY 30-39 years, male 423.5
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 421.2
GTEX-13QJ3-0826-SM-7DHKK 50-59 years, male 409.3
GTEX-1GN2E-2226-SM-9WG6J 60-69 years, male 408.1
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 402.7
GTEX-1H4P4-2226-SM-9MQKQ 50-59 years, male 398.7
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 397.9
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 389.9
GTEX-1F75A-1826-SM-7SB8G 50-59 years, male 374.0
GTEX-111YS-1926-SM-5GICC 60-69 years, male 373.6
GTEX-17HGU-1326-SM-79OKB 50-59 years, male 362.3
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 358.7
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 357.5
GTEX-1AX9J-1126-SM-731B7 60-69 years, male 355.4
GTEX-1B8KZ-1526-SM-7DUG7 50-59 years, male 355.2
GTEX-1HT8W-2226-SM-CGQEC 30-39 years, male 348.9
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 347.3
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 344.3
GTEX-1NV8Z-2826-SM-E8VME 60-69 years, male 342.9
GTEX-18A7B-2626-SM-7LG55 70-79 years, male 337.8
GTEX-1IDJH-2226-SM-E6CJV 70-79 years, male 336.7
GTEX-1R9PN-0326-SM-DTX85 40-49 years, female 335.5
GTEX-1QEPI-0926-SM-DTXF3 60-69 years, female 319.5
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 316.3
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 316.0
GTEX-Z9EW-1526-SM-EZ6LU 40-49 years, male 309.8
GTEX-17MFQ-0926-SM-7LG4S 20-29 years, male 306.3
GTEX-1POEN-0926-SM-DTX88 30-39 years, female 304.3
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 303.4
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 302.5
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 297.5
GTEX-1C6VQ-0426-SM-79OOX 50-59 years, male 297.3
GTEX-1EWIQ-1726-SM-7SB7T 70-79 years, female 296.1
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 294.1
GTEX-T6MN-0726-SM-32PML 50-59 years, male 293.5
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 288.7
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 286.9
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 280.3
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 280.1
GTEX-WFON-1826-SM-3GILG 40-49 years, male 277.0
GTEX-17HHY-0926-SM-793C1 50-59 years, male 276.4
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 274.9
GTEX-14E7W-0826-SM-62LEJ 70-79 years, male 273.4
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 267.6
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 266.0
GTEX-11P81-1926-SM-5BC53 30-39 years, female 264.1
GTEX-11GSP-0926-SM-9WYSG 60-69 years, female 262.4
GTEX-18465-2026-SM-718AP 50-59 years, male 258.4
GTEX-1MA7X-1626-SM-E9U5B 60-69 years, male 256.9
GTEX-1EKGG-2626-SM-7IGPY 60-69 years, male 250.0
GTEX-1HR9M-2426-SM-ACKXI 60-69 years, male 248.8
GTEX-1LSVX-2426-SM-E6CJX 60-69 years, male 248.0
GTEX-1B8L1-2426-SM-9WYTE 60-69 years, male 246.4
GTEX-1IOXB-1926-SM-ARL8E 50-59 years, male 245.8
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 243.5
GTEX-1R9PM-1826-SM-EVYBH 20-29 years, male 243.0
GTEX-1I1GP-0426-SM-COH3N 50-59 years, male 241.9
GTEX-15ER7-1626-SM-6PAMZ 20-29 years, female 241.8
GTEX-1OKEX-0826-SM-E9J2B 60-69 years, male 241.2
GTEX-1GPI7-0926-SM-7PC3J 20-29 years, male 239.3
GTEX-1HSMO-0826-SM-ADEIV 60-69 years, male 238.1
GTEX-117YX-1426-SM-5H12H 50-59 years, male 236.5
GTEX-1F6I4-2526-SM-7SB8F 60-69 years, male 236.2
GTEX-1I1HK-2426-SM-ADEHX 60-69 years, male 231.3
GTEX-S341-1526-SM-4AD6K 40-49 years, female 230.5
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 229.2
GTEX-1J8QM-2026-SM-ARZMW 60-69 years, female 228.1
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 227.0
GTEX-1I6K7-1026-SM-A9SLK 40-49 years, male 227.0
GTEX-1NUQO-2226-SM-E9U68 20-29 years, female 226.9
GTEX-13VXU-2826-SM-664MA 50-59 years, male 224.6
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 221.1
GTEX-XBED-1626-SM-47JYN 60-69 years, male 220.6
GTEX-144GM-0926-SM-5O994 20-29 years, male 219.6
GTEX-1F5PK-2126-SM-7PC28 50-59 years, male 219.3
GTEX-RU1J-0626-SM-4WAWY 20-29 years, female 218.4
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 218.1
GTEX-R55D-0826-SM-48FEA 50-59 years, male 212.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 212.4
GTEX-1B97I-0426-SM-79OL7 40-49 years, male 211.2
GTEX-YECK-0726-SM-EZ6LV 60-69 years, male 210.0
GTEX-1HFI7-0126-SM-CGQFQ 50-59 years, female 209.3
GTEX-1EN7A-1426-SM-7PBY4 40-49 years, male 207.4
GTEX-1GF9U-1726-SM-7MGY5 40-49 years, female 205.1
GTEX-1HC8U-0826-SM-ADEIL 40-49 years, female 205.1
GTEX-1PPGY-1526-SM-EVYBK 60-69 years, male 196.7
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 195.0
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 193.2
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 192.0
GTEX-1QMI2-0726-SM-E9J4F 60-69 years, male 190.8
GTEX-1B933-2526-SM-7IGO5 50-59 years, female 190.3
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 187.1
GTEX-1MJK2-2226-SM-EVYCR 50-59 years, male 186.0
GTEX-1122O-1226-SM-5H113 60-69 years, female 183.5
GTEX-1LSNL-2826-SM-E9U5L 50-59 years, male 183.4
GTEX-1GZHY-0726-SM-9WG6B 50-59 years, female 183.3
GTEX-145MF-2226-SM-7EPIR 50-59 years, male 179.9
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 178.0
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 177.3
GTEX-1QCLZ-2326-SM-DTXDO 60-69 years, female 176.9
GTEX-X62O-0526-SM-EWRMA 50-59 years, male 176.7
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 176.5
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 176.4
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 170.4
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 170.2
GTEX-ZTPG-2826-SM-57WGA 20-29 years, female 170.2
GTEX-14PKU-0426-SM-6EU1P 40-49 years, female 169.8
GTEX-15UF7-0726-SM-6M46D 40-49 years, male 169.3
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 167.0
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 166.8
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 166.2
GTEX-1CB4G-2326-SM-79OOI 60-69 years, male 164.2
GTEX-1J8Q3-1326-SM-CMKI1 60-69 years, male 162.6
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 162.4
GTEX-11EI6-0626-SM-5985T 60-69 years, male 162.2
GTEX-ZDTT-2126-SM-DKPOM 60-69 years, male 160.7
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 160.4
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 157.9
GTEX-1QP9N-1826-SM-E8VMP 30-39 years, male 156.9
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 156.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 155.5
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 154.7
GTEX-1IE54-0626-SM-ARL8D 40-49 years, female 153.9
GTEX-14BMV-0626-SM-793AU 50-59 years, male 151.8
GTEX-1KD4Q-2326-SM-D4P3M 40-49 years, male 151.8
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 150.5
GTEX-1QPFJ-2026-SM-EVYBE 30-39 years, female 150.2
GTEX-1E2YA-2726-SM-7IGPW 50-59 years, male 149.8
GTEX-1LC47-1226-SM-D4P44 60-69 years, male 149.7
GTEX-1GMR3-2626-SM-7RHHG 40-49 years, male 148.9
GTEX-1IY9M-2726-SM-CMKG5 60-69 years, male 148.4
GTEX-1M4P7-2626-SM-E9U5F 60-69 years, male 147.5
GTEX-1HR98-0426-SM-COH36 60-69 years, male 147.1
GTEX-1GMRU-0826-SM-9WYT7 50-59 years, male 146.7
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 146.1
GTEX-1N2EE-2126-SM-E8VNN 60-69 years, male 145.9
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 145.7
GTEX-1GZ4I-2826-SM-9MQK5 50-59 years, male 144.2
GTEX-17GQL-0326-SM-7LG5U 60-69 years, male 143.8
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 143.4
GTEX-1S82Z-0726-SM-E6CHX 30-39 years, female 142.1
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 142.0
GTEX-1B97J-0426-SM-79OLQ 50-59 years, female 142.0
GTEX-1MCYP-0126-SM-E6CIS 20-29 years, female 141.8
GTEX-1JKYN-0726-SM-ARZMY 30-39 years, male 138.8
GTEX-QMRM-1626-SM-D4P1U 50-59 years, male 138.1
GTEX-1JKYR-0926-SM-CMKGJ 20-29 years, male 136.8
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 135.0
GTEX-1LBAC-0926-SM-CXKY9 20-29 years, male 134.9
GTEX-15FZZ-0726-SM-7KUFZ 30-39 years, female 133.9
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 133.1
GTEX-14PJ4-2126-SM-6ETZJ 60-69 years, male 132.8
GTEX-17EVP-0226-SM-79OND 40-49 years, male 130.8
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 130.7
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 129.7
GTEX-17JCI-0726-SM-7EPH1 60-69 years, female 129.1
GTEX-14B4R-1226-SM-5TDDT 30-39 years, male 128.0
GTEX-1CAMR-1426-SM-793BO 20-29 years, male 127.9
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 127.3
GTEX-1LVAM-0926-SM-E9TJ2 50-59 years, female 127.0
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 125.8
GTEX-1IDJE-0826-SM-CKZNZ 50-59 years, female 124.7
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 124.1
GTEX-1PDJ9-1126-SM-EXUSW 20-29 years, male 123.6
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 123.4
GTEX-117XS-1926-SM-5GICO 60-69 years, male 123.0
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 122.8
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 122.6
GTEX-1NHNU-0926-SM-E9J2T 50-59 years, male 122.5
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 121.8
GTEX-1QP28-1226-SM-E9J2M 50-59 years, female 121.4
GTEX-1I6K6-0826-SM-ARL7Z 30-39 years, male 121.2
GTEX-1ICG6-1326-SM-ACKWR 70-79 years, female 121.1
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 120.6
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 119.7
GTEX-17HHE-1426-SM-7EPH4 50-59 years, male 119.5
GTEX-1J8EW-2626-SM-CL53E 60-69 years, female 119.4
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 119.3
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 119.0
GTEX-1BAJH-0826-SM-7EWEF 70-79 years, male 118.7
GTEX-1IKJJ-2326-SM-COH3U 60-69 years, male 118.6
GTEX-1H11D-1526-SM-9MQJY 40-49 years, male 118.4
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 117.5
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 117.1
GTEX-WHSB-1926-SM-EXOHH 50-59 years, male 115.3
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 115.1
GTEX-ZLV1-1426-SM-DO92Z 60-69 years, female 113.3
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 111.4
GTEX-1IDJF-2326-SM-ARL86 20-29 years, male 110.7
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 110.2
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 110.1
GTEX-1R7EV-1526-SM-E8VOD 40-49 years, male 109.9
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 107.1
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 106.3
GTEX-1L5NE-2126-SM-CY8IH 50-59 years, male 106.1
GTEX-R53T-1526-SM-48FEK 50-59 years, female 103.8
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 103.6
GTEX-1IDJU-1826-SM-CMKHV 60-69 years, female 103.5
GTEX-1I19N-2826-SM-CL55D 70-79 years, male 103.3
GTEX-TML8-1226-SM-32QON 40-49 years, female 101.9
GTEX-1QW4Y-1026-SM-DTXE2 30-39 years, male 101.5
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 100.8
GTEX-1KANC-1426-SM-CYPT9 50-59 years, female 99.9
GTEX-1S82U-1126-SM-E9U6I 30-39 years, female 98.5
GTEX-1HBPN-2326-SM-9WPPU 50-59 years, male 98.4
GTEX-16BQI-1026-SM-7KUEA 30-39 years, female 97.3
GTEX-1CB4E-0226-SM-79OLW 60-69 years, male 97.2
GTEX-1MJK3-1126-SM-E9J3F 20-29 years, male 96.1
GTEX-1H1CY-2226-SM-9WG7E 60-69 years, female 96.0
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 95.7
GTEX-18D9A-1526-SM-7LG4J 30-39 years, female 95.3
GTEX-17F96-2426-SM-7IGLN 70-79 years, male 94.9
GTEX-17F98-0526-SM-79OK5 40-49 years, female 94.9
GTEX-18A7A-0726-SM-7LTAI 50-59 years, female 94.7
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 94.4
GTEX-V955-2026-SM-3GAFA 60-69 years, male 94.4
GTEX-15ETS-0626-SM-7KUMX 40-49 years, female 93.5
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 92.7
GTEX-13113-5013-SM-7SB7G 60-69 years, female 92.4
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 91.8
GTEX-17F9E-2526-SM-7MGW2 50-59 years, male 91.7
GTEX-1H3VY-0926-SM-ACKXE 50-59 years, male 91.0
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 90.1
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 90.0
GTEX-1JMLX-2026-SM-CMKGN 50-59 years, male 90.0
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 89.5
GTEX-1A3MV-1626-SM-731C1 30-39 years, male 89.3
GTEX-17F97-2526-SM-7EWDV 50-59 years, male 89.0
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 88.7
GTEX-1KD5A-1926-SM-DKPQA 50-59 years, male 88.3
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 88.0
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 87.6
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 86.3
GTEX-1RAZQ-1226-SM-EWRNL 30-39 years, male 86.2
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 85.4
GTEX-1MCC2-2126-SM-EWRON 30-39 years, female 84.5
GTEX-1H1DG-0526-SM-9YFLN 70-79 years, male 84.0
GTEX-1AMEY-1026-SM-718AA 30-39 years, female 83.2
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 83.1
GTEX-1HCU8-0126-SM-ADEHH 60-69 years, female 82.6
GTEX-WFG8-2026-SM-EXOHO 20-29 years, male 82.6
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 82.5
GTEX-1GF9X-1026-SM-ACKX2 40-49 years, female 82.5
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 82.3
GTEX-REY6-2426-SM-48FF5 60-69 years, male 82.3
GTEX-15SHW-1326-SM-6PAL8 60-69 years, male 82.2
GTEX-1JJEA-2726-SM-ARL8V 60-69 years, male 81.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 81.4
GTEX-1C6VS-0726-SM-7EPHF 60-69 years, male 79.9
GTEX-ZAK1-1326-SM-EVYAS 50-59 years, female 79.3
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 79.2
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 78.7
GTEX-1R9JW-0326-SM-EAZ45 30-39 years, female 78.2
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 77.9
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 77.6
GTEX-1HSKV-2026-SM-CMKGX 60-69 years, male 76.9
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 76.5
GTEX-14PHY-1926-SM-5YY95 60-69 years, female 76.3
GTEX-1EU9M-2826-SM-7EWFH 60-69 years, male 76.3
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 76.1
GTEX-1HCU9-0326-SM-9WYSC 20-29 years, male 75.9
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 75.3
GTEX-1KANA-2026-SM-DIPFB 20-29 years, male 75.0
GTEX-15RJE-2626-SM-7KFT1 40-49 years, male 74.6
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 74.5
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 73.6
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 73.3
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 73.0
GTEX-14753-2426-SM-5LU8U 60-69 years, male 72.9
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 72.6
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 72.2
GTEX-1GZ4H-0326-SM-7P8QX 50-59 years, female 72.2
GTEX-15EOM-5019-SM-793DK 20-29 years, female 71.8
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 71.4
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 71.3
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 69.0
GTEX-18A66-1726-SM-7LG5N 60-69 years, male 68.9
GTEX-1JN6P-2426-SM-ARL99 60-69 years, male 68.7
GTEX-X261-0626-SM-3NMD9 50-59 years, male 68.5
GTEX-1KXAM-1026-SM-CY8IA 60-69 years, male 68.3
GTEX-1GMR8-0726-SM-9KNVI 50-59 years, female 68.0
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 67.2
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 67.0
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 66.3
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 65.3
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 64.9
GTEX-1PPH7-0826-SM-E8VNX 40-49 years, male 64.6
GTEX-1B8SG-1226-SM-7IGPF 50-59 years, male 64.3
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 64.3
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 63.8
GTEX-1RAZS-1226-SM-E8VMT 50-59 years, male 63.7
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 62.5
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 62.1
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 62.1
GTEX-1LNCM-0226-SM-DIPF4 50-59 years, female 61.7
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 61.6
GTEX-1JN1M-3026-SM-CMKGK 60-69 years, female 61.3
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 60.7
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 60.6
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 60.6
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 60.3
GTEX-18QFQ-0826-SM-718AX 30-39 years, male 60.2
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 59.7
GTEX-1HCUA-0726-SM-ACKVU 50-59 years, female 59.4
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 59.1
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 58.8
GTEX-1LVAN-1326-SM-CNPQE 50-59 years, female 58.8
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 58.7
GTEX-1R7EU-1226-SM-E8VMR 60-69 years, male 58.5
GTEX-1JMPY-0526-SM-CL54O 30-39 years, male 57.9
GTEX-1GN1W-1926-SM-7P8TH 50-59 years, female 57.5
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 57.1
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 56.7
GTEX-1HUB1-1626-SM-CM2SL 60-69 years, male 56.4
GTEX-13PVR-2226-SM-7DHKP 60-69 years, female 56.0
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 55.7
GTEX-1GPI6-0626-SM-7RHHJ 60-69 years, male 55.2
GTEX-1HSEH-2026-SM-ADEHN 60-69 years, male 54.0
GTEX-1IKOE-1326-SM-CE6T6 30-39 years, female 53.7
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 53.3
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 52.9
GTEX-1P4AB-1826-SM-E76PU 50-59 years, male 52.9
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 52.8
GTEX-14BMU-1626-SM-5TDE7 20-29 years, female 52.3
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 52.0
GTEX-1I1GU-1026-SM-ADEHJ 40-49 years, male 51.0
GTEX-1MA7W-1026-SM-DKPQK 20-29 years, female 51.0
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 50.8
GTEX-1F75B-0626-SM-7SB8A 50-59 years, male 50.7
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 50.6
GTEX-14ICK-2426-SM-6EU27 40-49 years, male 50.3
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 50.0
GTEX-1A3MX-2726-SM-718B6 60-69 years, male 49.9
GTEX-14DAR-1326-SM-7DUEG 50-59 years, male 49.6
GTEX-1JK1U-1826-SM-ARL8W 60-69 years, male 49.6
GTEX-1H1E6-0926-SM-9YFLT 30-39 years, male 49.4
GTEX-1A8G7-2426-SM-731AK 60-69 years, male 49.3
GTEX-1ICLZ-0426-SM-B2LW2 60-69 years, male 48.5
GTEX-11P82-1326-SM-5HL62 20-29 years, male 48.4
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 48.3
GTEX-16NGA-0826-SM-718AF 40-49 years, female 48.0
GTEX-ZGAY-1726-SM-DO91P 40-49 years, female 47.9
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 47.4
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 47.3
GTEX-1HKZK-1826-SM-ADEJ2 40-49 years, male 47.3
GTEX-1IDFM-0426-SM-B2LVV 60-69 years, male 47.2
GTEX-1CB4J-1826-SM-7EWF9 60-69 years, male 46.9
GTEX-1B932-0826-SM-73KXG 40-49 years, female 46.7
GTEX-1QCLY-1626-SM-DTXDW 30-39 years, male 46.6
GTEX-1KAFJ-0226-SM-DIPEL 50-59 years, male 46.4
GTEX-1HBPM-0126-SM-ARL9E 60-69 years, female 45.9
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 45.8
GTEX-17MF6-0326-SM-7EPH5 40-49 years, male 45.7
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 45.4
GTEX-1JJE9-2326-SM-ARL8Q 70-79 years, male 45.3
GTEX-ZF3C-2326-SM-5S2NC 50-59 years, female 45.3
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 44.3
GTEX-1JMPZ-1626-SM-COH31 30-39 years, male 44.1
GTEX-1R46S-2526-SM-E8VN2 60-69 years, female 43.9
GTEX-1B8KE-1226-SM-73KWK 50-59 years, male 43.6
GTEX-1GN1U-0526-SM-9KNTT 50-59 years, female 43.6
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 43.4
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 43.2
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 42.9
GTEX-1C64O-0726-SM-7DUFU 60-69 years, male 42.4
GTEX-QEL4-2126-SM-447AE 50-59 years, male 42.4
GTEX-1RLM8-2226-SM-EVYD1 50-59 years, male 42.4
GTEX-1F75I-2026-SM-7SB7N 40-49 years, male 42.1
GTEX-13SLW-2526-SM-62LDQ 70-79 years, male 41.6
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 41.5
GTEX-1K2DA-1726-SM-CGQGS 50-59 years, male 41.2
GTEX-1ICLY-1726-SM-B2LVT 50-59 years, male 41.1
GTEX-14PN4-0626-SM-62LFP 50-59 years, male 41.0
GTEX-1HSGN-1526-SM-A9SMO 40-49 years, female 40.5
GTEX-1H23P-0726-SM-9WG7K 60-69 years, male 40.4
GTEX-1I4MK-1626-SM-CM2TJ 50-59 years, female 40.1
GTEX-ZLFU-2126-SM-DO931 40-49 years, male 40.1
GTEX-17EVQ-0426-SM-7LG57 70-79 years, male 39.6
GTEX-1LSNM-1326-SM-E9TJ1 50-59 years, male 39.6
GTEX-1N5O9-1126-SM-DTXEQ 60-69 years, male 39.6
GTEX-1192X-2326-SM-5987X 50-59 years, male 39.1
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 39.1
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 39.0
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 38.8
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 38.5
GTEX-1IKOH-2326-SM-CM2TW 60-69 years, female 37.9
GTEX-1HCVE-2626-SM-ADEJ8 50-59 years, male 37.7
GTEX-1HCU7-1026-SM-ADEIP 50-59 years, male 37.1
GTEX-14PJO-0726-SM-69LO8 60-69 years, male 36.0
GTEX-1H1ZS-0126-SM-9YFKQ 70-79 years, male 36.0
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 35.6
GTEX-15G19-2126-SM-6M48J 60-69 years, male 35.5
GTEX-1RQEC-2026-SM-DTXDM 60-69 years, male 35.1
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 34.9
GTEX-14A5I-0726-SM-5TDEB 50-59 years, female 34.8
GTEX-169BO-1126-SM-7MGWN 50-59 years, male 34.3
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 33.7
GTEX-RU72-0626-SM-46MUI 50-59 years, female 33.6
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 33.6
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 33.1
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 32.9
GTEX-ZLWG-1926-SM-DO92J 50-59 years, female 32.8
GTEX-QEG5-0726-SM-D4P1T 20-29 years, male 32.6
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 32.1
GTEX-1QP29-1726-SM-E8VMQ 50-59 years, male 31.6
GTEX-1K9T9-1426-SM-DIPFQ 50-59 years, female 31.5
GTEX-1F5PL-1026-SM-7RHI1 40-49 years, female 31.2
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 30.9
GTEX-1JMOU-2026-SM-CMKGU 60-69 years, female 29.4
GTEX-14E6C-1326-SM-62LEQ 40-49 years, male 28.9
GTEX-1I1GT-1126-SM-ARL7J 60-69 years, female 28.4
GTEX-13SLX-2326-SM-5ZZWE 50-59 years, female 28.0
GTEX-1N2EF-2226-SM-E9J33 60-69 years, male 27.5
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 25.8
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 25.0
GTEX-1J8Q2-2726-SM-A9G2X 60-69 years, male 25.0
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 24.4
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 24.2
GTEX-1GMR2-1926-SM-9MQLZ 50-59 years, male 22.9
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 22.6
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 21.5
GTEX-15UF6-0126-SM-6PAMB 70-79 years, female 21.3
GTEX-1LGRB-1826-SM-CNPQL 50-59 years, female 21.2
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 20.5
GTEX-1CAMS-1426-SM-7IGPM 40-49 years, female 20.4
GTEX-17EUY-1926-SM-7DUF6 20-29 years, male 19.2
GTEX-1JMQK-2626-SM-COH2W 60-69 years, male 18.8
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 17.4
GTEX-14H4A-2526-SM-5YYAY 40-49 years, female 16.0
GTEX-183WM-0726-SM-7LTAA 70-79 years, female 15.9
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 11.6
GTEX-14LLW-0626-SM-62LFC 70-79 years, female 7.3
Show allShow less

BREAST - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

132.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Breast
Scaled Tags Per Million: 132.0
FF:10080-102A8 77 years, female 132.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org