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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:200.7 nTPM
HPA Brain:403.3 nTPM
GTEx:200.7 nTPM
FANTOM5:525.3 Scaled Tags Per Million
Pig:234.2 nTPM
Mouse:199.1 nTPM
Allen mouse:15.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042589
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

403.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 266.4
2481 Female, age 94, left hemisphere 439.5
1857 Female, age 85, left hemisphere 287.2
1854 Male, age 80, left hemisphere 286.4
2290 Female, age 72, unknown 258.7
2289 Male, age 61, right hemisphere 233.8
2288 Male, age 75, left hemisphere 228.4
1781 Male, age 74, unknown 224.9
2846 Female, age 79, unknown 172.5
Globus pallidus, externus
nTPM: 403.3
1996 Male, age 80, right hemisphere 710.0
2646 Male, age 61, right hemisphere 443.0
2772 Female, age 79, unknown 388.5
2395 Male, age 75, both hemispheres 258.8
2567 Female, age 72, unknown 216.3
Globus pallidus, internus
nTPM: 365.5
2037 Male, age 80, right hemisphere 628.5
2483 Female, age 94, right hemisphere 474.1
1818 Male, age 74, unknown 416.2
2287 Male, age 75, right hemisphere 321.6
2778 Female, age 91, both hemispheres 283.5
2111 Female, age 85, right hemisphere 224.3
2566 Female, age 72, unknown 210.2
Nucleus accumbens
nTPM: 243.9
2732 Male, age 80, right hemisphere 278.9
1806 Female, age 85, left hemisphere 265.8
1856 Female, age 91, right hemisphere 264.7
2698 Female, age 72, unknown 262.4
2391 Female, age 94, left hemisphere 252.7
2286 Male, age 75, left hemisphere 246.5
1783 Male, age 74, unknown 198.1
2824 Male, age 61, right hemisphere 182.2
Nucleus basalis of Meynert
nTPM: 286.7
2569 Male, age 61, both hemispheres 454.4
2393 Male, age 80, right hemisphere 344.9
2484 Female, age 94, left hemisphere 201.4
2821 Male, age 75, both hemispheres 146.1
Nucleus of the diagonal band
nTPM: 216.8
1979 Male, age 74, unknown 274.7
1812 Female, age 91, both hemispheres 255.0
2775 Male, age 80, right hemisphere 207.2
2195 Female, age 85, both hemispheres 174.8
2029 Male, age 61, right hemisphere 172.1
Putamen
nTPM: 218.2
1838 Male, age 80, right hemisphere 280.7
2482 Female, age 94, left hemisphere 274.6
1829 Male, age 74, unknown 242.3
1937 Female, age 91, right hemisphere 231.4
2489 Female, age 72, unknown 187.7
2466 Female, age 79, unknown 171.0
2647 Male, age 75, left hemisphere 139.5
Septal nuclei
nTPM: 245.6
2199 Male, age 80, right hemisphere 401.8
2394 Male, age 61, left hemisphere 267.8
2059 Female, age 85, both hemispheres 256.4
2009 Female, age 91, both hemispheres 232.5
2629 Female, age 94, right hemisphere 231.1
2031 Female, age 72, unknown 178.1
1960 Male, age 74, unknown 151.6
Stria terminalis, bed nucleus
nTPM: 212.1
2201 Male, age 74, unknown 282.0
1974 Female, age 91, both hemispheres 177.4
2486 Female, age 94, both hemispheres 177.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 198.6
Samples: 246

Max nTPM: 592.8
Min nTPM: 43.4
Std nTPM: 81.3
Median nTPM: 181.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 592.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 501.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 486.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 406.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 404.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 397.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 395.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 378.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 377.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 371.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 370.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 367.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 347.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 339.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 338.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 336.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 335.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 333.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 330.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 319.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 318.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 311.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 310.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 304.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 302.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 301.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 300.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 299.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 298.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 298.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 297.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 295.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 294.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 290.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 287.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 282.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 274.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 274.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 271.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 270.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 268.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 266.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 264.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 261.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 259.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 259.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 258.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 256.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 255.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 251.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 249.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 246.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 245.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 245.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 245.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 244.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 242.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 241.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 238.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 237.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 237.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 237.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 237.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 236.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 232.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 231.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 229.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 228.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 228.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 227.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 226.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 225.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 225.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 224.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 223.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 223.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 222.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 222.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 221.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 220.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 219.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 219.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 218.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 217.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 216.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 216.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 216.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 215.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 214.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 214.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 213.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 212.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 212.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 211.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 210.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 207.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 207.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 207.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 204.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 203.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 202.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 202.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 201.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 201.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 200.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 198.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 198.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 194.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 194.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 192.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 192.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 191.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 191.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 190.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 190.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 189.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 186.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 185.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 183.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 182.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 181.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 181.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 181.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 181.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 180.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 180.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 179.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 179.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 178.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 178.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 177.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 175.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 174.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 173.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 173.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 172.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 172.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 172.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 171.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 171.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 171.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 170.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 170.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 168.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 168.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 168.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 167.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 166.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 165.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 165.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 165.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 165.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 164.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 164.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 164.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 162.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 161.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 161.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 161.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 159.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 155.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 155.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 154.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 153.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 152.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 152.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 151.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 151.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 151.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 150.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 149.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 149.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 149.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 148.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 148.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 147.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 147.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 146.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 145.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 145.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 145.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 144.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 141.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 141.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 140.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 140.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 140.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 139.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 139.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 138.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 138.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 138.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 137.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 136.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 136.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 135.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 133.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 133.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 133.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 133.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 132.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 130.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 129.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 128.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 128.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 125.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 125.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 124.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 124.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 123.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 122.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 121.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 121.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 121.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 121.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 120.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 120.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 119.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 119.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 118.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 117.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 117.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 116.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 113.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 112.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 112.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 110.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 109.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 108.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 107.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 107.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 105.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 105.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 96.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 95.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 95.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 89.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 82.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 81.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 79.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 69.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 65.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 56.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 43.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 200.7
Samples: 246

Max nTPM: 619.1
Min nTPM: 57.5
Std nTPM: 80.1
Median nTPM: 177.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 619.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 492.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 440.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 439.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 415.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 382.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 375.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 375.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 373.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 372.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 365.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 363.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 354.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 354.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 351.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 350.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 332.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 329.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 326.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 325.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 321.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 319.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 318.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 318.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 315.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 315.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 314.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 314.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 313.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 312.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 310.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 298.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 298.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 295.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 295.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 289.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 285.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 283.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 278.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 274.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 273.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 272.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 271.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 266.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 259.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 259.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 255.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 255.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 254.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 254.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 253.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 250.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 249.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 249.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 246.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 245.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 245.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 244.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 243.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 242.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 240.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 237.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 236.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 235.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 235.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 235.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 234.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 234.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 232.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 232.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 229.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 229.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 228.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 225.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 224.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 222.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 221.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 217.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 217.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 216.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 212.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 210.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 210.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 209.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 208.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 205.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 205.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 205.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 202.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 201.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 200.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 200.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 200.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 199.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 199.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 198.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 197.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 195.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 194.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 193.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 193.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 193.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 192.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 192.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 192.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 192.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 191.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 190.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 189.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 187.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 185.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 184.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 182.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 181.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 180.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 180.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 180.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 179.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 179.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 179.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 178.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 177.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 177.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 177.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 177.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 177.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 176.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 176.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 175.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 175.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 174.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 174.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 174.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 174.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 173.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 172.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 171.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 171.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 170.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 170.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 170.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 169.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 168.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 168.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 168.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 167.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 167.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 167.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 166.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 164.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 164.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 163.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 163.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 162.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 161.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 161.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 161.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 161.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 160.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 160.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 160.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 160.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 160.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 160.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 159.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 158.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 158.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 157.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 157.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 156.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 156.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 156.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 156.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 155.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 153.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 152.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 150.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 149.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 147.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 147.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 146.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 146.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 145.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 145.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 145.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 144.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 144.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 144.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 143.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 143.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 142.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 142.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 142.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 141.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 141.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 141.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 141.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 141.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 139.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 139.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 138.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 138.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 137.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 136.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 136.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 134.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 134.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 134.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 134.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 133.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 132.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 131.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 130.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 128.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 128.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 127.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 127.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 126.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 124.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 123.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 123.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 119.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 117.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 117.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 116.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 115.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 115.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 114.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 113.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 110.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 109.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 109.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 108.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 106.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 105.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 105.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 103.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 103.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 100.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 95.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 89.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 88.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 86.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 80.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 62.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 57.5
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Brain - Putamen (basal ganglia)
Average nTPM: 177.3
Samples: 205

Max nTPM: 492.7
Min nTPM: 44.5
Std nTPM: 73.4
Median nTPM: 165.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 492.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 467.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 454.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 413.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 354.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 346.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 329.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 317.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 314.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 310.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 297.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 297.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 297.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 290.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 289.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 286.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 281.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 280.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 277.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 273.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 272.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 270.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 270.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 270.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 264.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 264.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 263.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 262.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 261.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 246.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 245.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 241.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 240.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 240.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 239.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 235.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 232.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 229.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 228.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 227.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 223.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 219.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 219.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 218.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 215.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 215.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 215.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 213.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 211.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 210.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 210.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 208.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 205.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 204.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 204.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 204.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 203.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 202.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 202.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 202.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 201.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 201.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 200.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 197.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 196.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 195.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 194.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 193.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 192.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 192.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 191.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 191.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 190.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 190.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 190.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 188.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 188.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 187.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 185.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 185.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 182.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 182.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 181.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 181.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 181.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 180.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 180.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 180.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 180.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 179.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 176.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 176.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 176.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 176.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 173.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 170.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 168.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 168.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 167.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 167.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 166.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 166.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 165.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 165.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 165.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 164.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 164.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 164.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 162.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 161.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 161.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 160.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 160.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 158.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 157.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 156.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 156.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 155.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 155.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 155.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 154.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 153.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 152.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 152.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 151.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 151.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 149.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 149.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 148.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 147.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 146.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 144.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 142.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 142.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 142.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 141.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 141.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 141.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 141.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 140.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 138.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 137.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 137.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 136.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 135.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 135.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 133.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 132.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 131.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 131.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 129.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 128.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 127.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 127.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 126.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 126.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 126.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 126.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 126.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 125.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 123.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 122.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 119.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 119.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 118.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 117.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 117.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 115.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 115.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 113.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 111.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 110.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 110.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 109.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 108.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 107.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 107.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 106.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 105.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 104.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 101.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 101.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 100.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 100.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 99.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 99.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 97.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 93.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 90.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 87.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 85.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 84.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 84.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 84.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 83.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 74.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 72.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 72.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 69.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 69.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 64.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 58.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 55.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 54.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 44.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

525.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 525.3
FF:10164-103B2 76 years, female 525.3
Nucleus accumbens
Scaled Tags Per Million: 231.2
FF:10037-101F1 23-56 years, mixed 231.2
Putamen
Scaled Tags Per Million: 393.2
FF:10176-103C5 60 years, female 393.2
Globus pallidus
Scaled Tags Per Million: 425.1
FF:10175-103C4 60 years, female 445.7
FF:10161-103A8 76 years, female 404.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

234.2
Pig sample Sample description nTPM
Caudate
nTPM: 207.7
Samples: 4

Max nTPM: 235.0
Min nTPM: 176.1
Sample A Female 176.1
Sample B Female 231.1
Sample C Male 235.0
Sample D Male 188.6
Putamen
nTPM: 234.2
Samples: 4

Max nTPM: 284.3
Min nTPM: 211.9
Sample A Female 227.1
Sample B Female 211.9
Sample C Male 284.3
Sample D Male 213.6
Septum
nTPM: 184.7
Samples: 4

Max nTPM: 202.2
Min nTPM: 167.0
Sample A Female 173.3
Sample B Female 196.3
Sample C Male 167.0
Sample D Male 202.2
Ventral pallidum
nTPM: 195.2
Samples: 4

Max nTPM: 221.7
Min nTPM: 175.9
Sample A Female 175.9
Sample B Female 221.7
Sample C Male 199.0
Sample D Male 184.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 199.1
Samples: 4

Max nTPM: 206.0
Min nTPM: 186.0
Sample A Male 199.2
Sample B Male 186.0
Sample C Female 206.0
Sample D Female 205.3
Septum
nTPM: 182.2
Samples: 4

Max nTPM: 197.8
Min nTPM: 153.5
Sample A Male 153.5
Sample B Male 191.6
Sample C Female 185.9
Sample D Female 197.8
Ventral forebrain
nTPM: 186.7
Samples: 4

Max nTPM: 194.7
Min nTPM: 178.4
Sample A Male 185.4
Sample B Male 188.1
Sample C Female 178.4
Sample D Female 194.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 15.3
69838759 Antisense, RP_050324_01_G12, Mouse strain C57BL/6J (56 days, male) 15.3
Pallidum
Expression energy: 12.1
69838759 Antisense, RP_050324_01_G12, Mouse strain C57BL/6J (56 days, male) 12.1

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